Cow genome map
Conread name: | Ss1.1-LyN1-MLN01C040097.5 |
Conread position: | 1-208 |
Cow position: | chr11:15772496-15772713 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 152 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 107, 210 |
Conread position: | 4-166 |
Cow position: | chr11:28078704-28078536 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 31, 6 |
Conread position: | 4-186 |
Cow position: | chr11:75388166-75388355 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 140 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 97, 11 |
Conread position: | 7-180 |
Cow position: | chr11:75874562-75874726 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 130 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 7-190 |
Cow position: | chr11:39462831-39462641 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 135 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 9-170 |
Cow position: | chr11:2830864-2830695 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 126 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 94, 18 |
Conread position: | 9-190 |
Cow position: | chr11:64105201-64105015 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 134 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 94, 31 |
Conread position: | 10-180 |
Cow position: | chr11:58186079-58185911 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 136 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 12-186 |
Cow position: | chr11:70756682-70756500 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 132 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 12-190 |
Cow position: | chr11:35536781-35536605 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 141 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 91, 52 |
Conread position: | 12-214 |
Cow position: | chr11:9699045-9699252 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 152 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 29, 105 |
Conread position: | 13-178 |
Cow position: | chr11:42067067-42066895 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 129 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 90, 18 |
Conread position: | 13-186 |
Cow position: | chr11:77013977-77013803 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 127 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 23, 92 |
Conread position: | 13-190 |
Cow position: | chr11:49396321-49396508 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 137 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 9, 19 |
Conread position: | 14-179 |
Cow position: | chr11:18483996-18484159 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 131 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 25, 100 |
Conread position: | 14-179 |
Cow position: | chr11:36182897-36182724 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 129 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 8, 68 |
Conread position: | 15-186 |
Cow position: | chr11:38223591-38223765 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 134 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 13, 9 |
Conread position: | 16-180 |
Cow position: | chr11:15366775-15366944 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 126 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 16-184 |
Cow position: | chr11:30211085-30210929 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 115, 15 |
Conread position: | 16-190 |
Cow position: | chr11:62620576-62620394 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 133 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 90, 22 |
Conread position: | 16-191 |
Cow position: | chr11:3175870-3175690 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 133 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 92, 47 |
Conread position: | 17-186 |
Cow position: | chr11:18699071-18698902 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 138 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 18-189 |
Cow position: | chr11:84764218-84764052 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 129 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 22, 9 |
Conread position: | 18-190 |
Cow position: | chr11:71805966-71806133 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 126 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 168, 85 |
Conread position: | 18-191 |
Cow position: | chr11:30172498-30172321 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 136 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 90, 18 |
Conread position: | 18-211 |
Cow position: | chr11:77241903-77241701 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 141 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 19-179 |
Cow position: | chr11:17369722-17369560 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 84, 17 |
Conread position: | 19-190 |
Cow position: | chr11:33347999-33348169 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 130 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 21, 57 |
Conread position: | 21-170 |
Cow position: | chr11:82732954-82733111 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 122 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 37, 7 |
Conread position: | 22-179 |
Cow position: | chr11:15949909-15950057 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 22-212 |
Cow position: | chr11:52297026-52297226 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 145 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 23-191 |
Cow position: | chr11:84968559-84968395 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 124 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 23-210 |
Cow position: | chr11:83043172-83043366 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 140 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 23-217 |
Cow position: | chr11:27461916-27462108 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 142 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 174, 80 |
Conread position: | 24-203 |
Cow position: | chr11:49057577-49057397 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 130 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 26-186 |
Cow position: | chr11:29978161-29978314 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 118 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 26-186 |
Cow position: | chr11:63498939-63499107 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 126 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 26-190 |
Cow position: | chr11:17227460-17227627 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 125 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 75, 16 |
Conread position: | 26-190 |
Cow position: | chr11:78820341-78820169 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 128 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 82, 113 |
Conread position: | 26-191 |
Cow position: | chr11:48900669-48900828 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 134 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 159, 10 |
Conread position: | 28-164 |
Cow position: | chr11:2937482-2937619 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 110 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 28-177 |
Cow position: | chr11:36092730-36092884 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 72, 12 |
Conread position: | 28-186 |
Cow position: | chr11:9270548-9270703 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 125 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 76, 44 |
Conread position: | 28-186 |
Cow position: | chr11:65607498-65607666 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 130 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 28-190 |
Cow position: | chr11:46784654-46784492 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 125 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 12, 93 |
Conread position: | 28-190 |
Cow position: | chr11:66041461-66041296 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 121 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 70, 18 |
Conread position: | 28-190 |
Cow position: | chr11:80586455-80586292 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 91, 18 |
Conread position: | 28-191 |
Cow position: | chr11:66188131-66188300 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 134 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 88, 41 |
Conread position: | 30-180 |
Cow position: | chr11:38194363-38194223 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 30-180 |
Cow position: | chr11:43360598-43360755 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 31-141 |
Cow position: | chr11:31508090-31507976 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 94 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 32-180 |
Cow position: | chr11:75915171-75915022 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 71, 14 |
Conread position: | 32-186 |
Cow position: | chr11:40818447-40818604 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 71, 16 |
Conread position: | 32-190 |
Cow position: | chr11:42083639-42083486 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 125 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 154, 68 |
Conread position: | 32-191 |
Cow position: | chr11:18572969-18572817 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 155, 71 |
Conread position: | 33-170 |
Cow position: | chr11:35848957-35849099 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 33-170 |
Cow position: | chr11:63478547-63478411 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 104 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 33-186 |
Cow position: | chr11:38639284-38639134 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 33-186 |
Cow position: | chr11:62742464-62742623 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 126 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 70, 7 |
Conread position: | 33-191 |
Cow position: | chr11:84890542-84890700 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 16, 83 |
Conread position: | 36-170 |
Cow position: | chr11:3267486-3267617 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 110 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 36-170 |
Cow position: | chr11:62789309-62789169 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 108 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 36-180 |
Cow position: | chr11:8421943-8422089 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 36-180 |
Cow position: | chr11:41985866-41986017 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 36-180 |
Cow position: | chr11:62483792-62483933 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 36-190 |
Cow position: | chr11:35276433-35276287 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 36-190 |
Cow position: | chr11:49153122-49152967 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 121 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 36-190 |
Cow position: | chr11:67600960-67600802 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 124 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 37-180 |
Cow position: | chr11:6194569-6194427 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 116 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 84, 95 |
Conread position: | 37-186 |
Cow position: | chr11:45671199-45671347 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 119 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 38-154 |
Cow position: | chr11:66104213-66104334 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 38-157 |
Cow position: | chr11:2310247-2310127 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 100 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 38-179 |
Cow position: | chr11:51729454-51729316 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 114 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 38-186 |
Cow position: | chr11:41313482-41313634 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 115 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 77, 37 |
Conread position: | 38-190 |
Cow position: | chr11:36647507-36647361 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 148, 37 |
Conread position: | 38-191 |
Cow position: | chr11:55762036-55761885 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 123 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 78, 10 |
Conread position: | 38-211 |
Cow position: | chr11:63485112-63484935 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 138 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 65, 167 |
Conread position: | 39-186 |
Cow position: | chr11:1485055-1485204 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 39-200 |
Cow position: | chr11:64048569-64048411 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 148, 32 |
Conread position: | 40-166 |
Cow position: | chr11:57170432-57170556 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 40-178 |
Cow position: | chr11:1842135-1841994 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 40-191 |
Cow position: | chr11:21852138-21852285 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 116 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 147, 63 |
Conread position: | 40-211 |
Cow position: | chr11:26535962-26535783 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 134 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 63, 124 |
Conread position: | 43-190 |
Cow position: | chr11:13042973-13043128 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 48-190 |
Cow position: | chr11:28993578-28993720 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 76, 71 |
Conread position: | 50-180 |
Cow position: | chr11:73353899-73354031 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.