Cow genome map
Conread name: | Ss1.1-LyN1-MLN01C040097.5 |
Conread position: | 1-180 |
Cow position: | chr20:32847620-32847434 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 133 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 2-153 |
Cow position: | chr20:19622971-19623128 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 33, 10 |
Conread position: | 4-189 |
Cow position: | chr20:21941700-21941514 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 138 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 26, 57 |
Conread position: | 6-180 |
Cow position: | chr20:9379753-9379579 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 130 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 15, 23 |
Conread position: | 7-147 |
Cow position: | chr20:19899575-19899431 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 7-184 |
Cow position: | chr20:6603298-6603126 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 135 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 10-169 |
Cow position: | chr20:33532556-33532403 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 122 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 12-135 |
Cow position: | chr20:13283293-13283417 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 12-180 |
Cow position: | chr20:10236082-10235920 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 122 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 12-182 |
Cow position: | chr20:21169504-21169675 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 125 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 14-189 |
Cow position: | chr20:28899349-28899180 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 131 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 14, 91 |
Conread position: | 15-214 |
Cow position: | chr20:36741722-36741519 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 148 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 99, 21 |
Conread position: | 16-135 |
Cow position: | chr20:17764858-17764982 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 16-180 |
Cow position: | chr20:35146272-35146110 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 121 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 96, 10 |
Conread position: | 16-186 |
Cow position: | chr20:11548469-11548641 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 127 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 101, 20 |
Conread position: | 16-190 |
Cow position: | chr20:14807144-14806965 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 25, 12 |
Conread position: | 17-183 |
Cow position: | chr20:5645037-5644874 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 18, 85 |
Conread position: | 18-169 |
Cow position: | chr20:22235559-22235412 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 114 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 22, 86 |
Conread position: | 18-186 |
Cow position: | chr20:13617472-13617309 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 130 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 23, 85 |
Conread position: | 18-187 |
Cow position: | chr20:27315235-27315060 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 19-190 |
Cow position: | chr20:34108349-34108184 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 131 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 21, 86 |
Conread position: | 20-190 |
Cow position: | chr20:7737977-7738153 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 127 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 20-190 |
Cow position: | chr20:20590046-20590223 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 128 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 21-170 |
Cow position: | chr20:35605459-35605306 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 114 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 23-156 |
Cow position: | chr20:4781842-4781711 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 103 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 23-160 |
Cow position: | chr20:32174748-32174615 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 109 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 24-189 |
Cow position: | chr20:5576442-5576286 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 128 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 10, 49 |
Conread position: | 25-186 |
Cow position: | chr20:11101656-11101493 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 121 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 17, 120 |
Conread position: | 25-190 |
Cow position: | chr20:14283173-14282998 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 132 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 81, 13 |
Conread position: | 27-180 |
Cow position: | chr20:38934816-38934966 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 120 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 28-170 |
Cow position: | chr20:40578425-40578568 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 84, 36 |
Conread position: | 28-190 |
Cow position: | chr20:11499253-11499086 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 13, 103 |
Conread position: | 30-190 |
Cow position: | chr20:25009386-25009554 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 124 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 31-160 |
Cow position: | chr20:3502747-3502618 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 102 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 9, 115 |
Conread position: | 31-190 |
Cow position: | chr20:4334292-4334452 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 133 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 84, 72 |
Conread position: | 31-190 |
Cow position: | chr20:20967566-20967399 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 32-170 |
Cow position: | chr20:13805561-13805420 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 71, 117 |
Conread position: | 32-170 |
Cow position: | chr20:38061528-38061667 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 32-176 |
Cow position: | chr20:14980262-14980412 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 71, 105 |
Conread position: | 32-183 |
Cow position: | chr20:26090717-26090869 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 115 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 78, 100 |
Conread position: | 32-186 |
Cow position: | chr20:14755598-14755757 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 117 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 32-186 |
Cow position: | chr20:14759429-14759582 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 121 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 87, 71 |
Conread position: | 32-186 |
Cow position: | chr20:21325570-21325409 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 32-186 |
Cow position: | chr20:21372541-21372391 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 87, 37 |
Conread position: | 32-187 |
Cow position: | chr20:21279627-21279468 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 32-190 |
Cow position: | chr20:12581711-12581876 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 32-191 |
Cow position: | chr20:9376707-9376547 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 126 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 85, 60 |
Conread position: | 32-191 |
Cow position: | chr20:19746217-19746048 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 32-208 |
Cow position: | chr20:2316182-2316366 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 135 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 36-196 |
Cow position: | chr20:33781111-33780942 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 125 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 37-190 |
Cow position: | chr20:37919136-37919292 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 79, 23 |
Conread position: | 38-191 |
Cow position: | chr20:22923153-22922995 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 122 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 79, 53 |
Conread position: | 38-237 |
Cow position: | chr20:16566528-16566329 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 115 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 77, 94 |
Conread position: | 39-170 |
Cow position: | chr20:37166182-37166050 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 100 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 40-191 |
Cow position: | chr20:40511535-40511679 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 120 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 148, 63 |
Conread position: | 40-214 |
Cow position: | chr20:14880023-14879842 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 133 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 62-191 |
Cow position: | chr20:32555498-32555367 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 106 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.