Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C040097.5 |
| Conread position: | 1-180 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 2-153 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 4-189 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 6-180 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 7-147 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 7-184 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 10-169 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 12-135 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 12-180 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 12-182 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 14-189 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 91 |
| Conread position: | 15-214 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 16-135 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 16-180 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 96, 10 |
| Conread position: | 16-186 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 16-190 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 17-183 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 18-169 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 86 |
| Conread position: | 18-186 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 18-187 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 19-190 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 20-190 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 20-190 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 21-170 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 23-156 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 23-160 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 24-189 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 25-186 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 120 |
| Conread position: | 25-190 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 81, 13 |
| Conread position: | 27-180 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 28-170 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 36 |
| Conread position: | 28-190 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 30-190 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 31-160 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 115 |
| Conread position: | 31-190 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 72 |
| Conread position: | 31-190 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 32-170 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 117 |
| Conread position: | 32-170 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 32-176 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 71, 105 |
| Conread position: | 32-183 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 100 |
| Conread position: | 32-186 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 32-186 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 32-186 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 32-186 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 32-187 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 32-190 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 32-191 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 85, 60 |
| Conread position: | 32-191 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 32-208 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 36-196 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 37-190 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 23 |
| Conread position: | 38-191 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 79, 53 |
| Conread position: | 38-237 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 77, 94 |
| Conread position: | 39-170 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 40-191 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 148, 63 |
| Conread position: | 40-214 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 62-191 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.