Cow genome map

Conread name: Ss1.1-LyN1-MLN01C040097.5

Conread position: 1-180
Cow position: chr20:32847620-32847434 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 2-153
Cow position: chr20:19622971-19623128 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 10

Conread position: 4-189
Cow position: chr20:21941700-21941514 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 57

Conread position: 6-180
Cow position: chr20:9379753-9379579 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 23

Conread position: 7-147
Cow position: chr20:19899575-19899431 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 7-184
Cow position: chr20:6603298-6603126 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 10-169
Cow position: chr20:33532556-33532403 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 12-135
Cow position: chr20:13283293-13283417 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 12-180
Cow position: chr20:10236082-10235920 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 12-182
Cow position: chr20:21169504-21169675 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 14-189
Cow position: chr20:28899349-28899180 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 91

Conread position: 15-214
Cow position: chr20:36741722-36741519 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 21

Conread position: 16-135
Cow position: chr20:17764858-17764982 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 16-180
Cow position: chr20:35146272-35146110 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 10

Conread position: 16-186
Cow position: chr20:11548469-11548641 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 20

Conread position: 16-190
Cow position: chr20:14807144-14806965 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 12

Conread position: 17-183
Cow position: chr20:5645037-5644874 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 18, 85

Conread position: 18-169
Cow position: chr20:22235559-22235412 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 86

Conread position: 18-186
Cow position: chr20:13617472-13617309 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 85

Conread position: 18-187
Cow position: chr20:27315235-27315060 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 19-190
Cow position: chr20:34108349-34108184 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 21, 86

Conread position: 20-190
Cow position: chr20:7737977-7738153 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 20-190
Cow position: chr20:20590046-20590223 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 21-170
Cow position: chr20:35605459-35605306 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 23-156
Cow position: chr20:4781842-4781711 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 23-160
Cow position: chr20:32174748-32174615 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 24-189
Cow position: chr20:5576442-5576286 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 10, 49

Conread position: 25-186
Cow position: chr20:11101656-11101493 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 17, 120

Conread position: 25-190
Cow position: chr20:14283173-14282998 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 81, 13

Conread position: 27-180
Cow position: chr20:38934816-38934966 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 28-170
Cow position: chr20:40578425-40578568 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 36

Conread position: 28-190
Cow position: chr20:11499253-11499086 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 13, 103

Conread position: 30-190
Cow position: chr20:25009386-25009554 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 31-160
Cow position: chr20:3502747-3502618 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 115

Conread position: 31-190
Cow position: chr20:4334292-4334452 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 84, 72

Conread position: 31-190
Cow position: chr20:20967566-20967399 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 32-170
Cow position: chr20:13805561-13805420 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 117

Conread position: 32-170
Cow position: chr20:38061528-38061667 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 32-176
Cow position: chr20:14980262-14980412 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 105

Conread position: 32-183
Cow position: chr20:26090717-26090869 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 100

Conread position: 32-186
Cow position: chr20:14755598-14755757 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 32-186
Cow position: chr20:14759429-14759582 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 87, 71

Conread position: 32-186
Cow position: chr20:21325570-21325409 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 32-186
Cow position: chr20:21372541-21372391 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 37

Conread position: 32-187
Cow position: chr20:21279627-21279468 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 32-190
Cow position: chr20:12581711-12581876 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 32-191
Cow position: chr20:9376707-9376547 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 85, 60

Conread position: 32-191
Cow position: chr20:19746217-19746048 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 32-208
Cow position: chr20:2316182-2316366 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 36-196
Cow position: chr20:33781111-33780942 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 37-190
Cow position: chr20:37919136-37919292 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 23

Conread position: 38-191
Cow position: chr20:22923153-22922995 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 53

Conread position: 38-237
Cow position: chr20:16566528-16566329 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 94

Conread position: 39-170
Cow position: chr20:37166182-37166050 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 40-191
Cow position: chr20:40511535-40511679 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 148, 63

Conread position: 40-214
Cow position: chr20:14880023-14879842 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 62-191
Cow position: chr20:32555498-32555367 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 0

Show alignments to all cow chromosomes.