Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C040097.5 |
| Conread position: | 1-186 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 102, 9 |
| Conread position: | 1-186 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 6-190 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 97, 18 |
| Conread position: | 6-207 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 106, 25 |
| Conread position: | 10-165 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 105, 21 |
| Conread position: | 13-190 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 90, 23 |
| Conread position: | 14-161 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 14-186 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 15-131 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 15-186 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 11 |
| Conread position: | 15-186 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 99, 24 |
| Conread position: | 15-190 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 16-170 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 16-170 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 23, 135 |
| Conread position: | 16-215 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 18-182 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 18-186 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 18-187 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 18-190 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 18-191 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 82, 10 |
| Conread position: | 18-197 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 119 |
| Conread position: | 19-190 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 168, 84 |
| Conread position: | 20-154 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 21-160 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 21-179 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 81, 15 |
| Conread position: | 21-196 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 23-149 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 27-186 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 100, 86 |
| Conread position: | 28-172 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 123 |
| Conread position: | 28-177 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 28-180 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 28-186 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 28-190 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 30-190 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 31-186 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 118 |
| Conread position: | 32-169 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 32-169 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 71, 122 |
| Conread position: | 32-189 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 32-190 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 32-190 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 32-190 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 32-190 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 32-190 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 83, 117 |
| Conread position: | 32-190 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 32-213 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 167 |
| Conread position: | 33-214 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 36-180 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 67, 27 |
| Conread position: | 36-180 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 36-180 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 36-186 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 36-190 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 36-191 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 34, 79 |
| Conread position: | 36-208 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 79, 64 |
| Conread position: | 36-215 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 95 |
| Conread position: | 38-160 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 38-170 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 38-186 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 38-186 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 38-191 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 38-191 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 150, 65 |
| Conread position: | 39-180 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 39-186 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-188 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 39-196 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 64, 41 |
| Conread position: | 40-178 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-190 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 40-190 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 43-186 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 30 |
| Conread position: | 48-180 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 48-211 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 52-180 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.