Cow genome map
Conread name: | Ss1.1-LyN1-MLN01C040097.5 |
Conread position: | 1-186 |
Cow position: | chr21:6851459-6851276 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 137 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 102, 9 |
Conread position: | 1-186 |
Cow position: | chr21:15543939-15544125 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 140 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 40, 71 |
Conread position: | 6-190 |
Cow position: | chr21:28244755-28244569 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 140 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 97, 18 |
Conread position: | 6-207 |
Cow position: | chr21:24757225-24757024 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 146 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 106, 25 |
Conread position: | 10-165 |
Cow position: | chr21:33244597-33244746 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 105, 21 |
Conread position: | 13-190 |
Cow position: | chr21:30222625-30222444 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 133 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 90, 23 |
Conread position: | 14-161 |
Cow position: | chr21:1296009-1295858 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 14-186 |
Cow position: | chr21:12298872-12298698 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 135 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 15-131 |
Cow position: | chr21:40432747-40432626 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 15-186 |
Cow position: | chr21:8523912-8523745 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 131 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 91, 11 |
Conread position: | 15-186 |
Cow position: | chr21:18495496-18495325 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 133 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 99, 24 |
Conread position: | 15-190 |
Cow position: | chr21:40589197-40589383 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 137 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 16-170 |
Cow position: | chr21:18497716-18497874 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 16-170 |
Cow position: | chr21:29011691-29011852 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 127 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 23, 135 |
Conread position: | 16-215 |
Cow position: | chr21:34654353-34654146 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 148 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 18-182 |
Cow position: | chr21:34581429-34581583 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 18-186 |
Cow position: | chr21:27521060-27521235 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 130 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 17, 38 |
Conread position: | 18-187 |
Cow position: | chr21:8207036-8206875 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 18-190 |
Cow position: | chr21:11678042-11678213 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 126 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 18-191 |
Cow position: | chr21:30145354-30145530 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 138 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 82, 10 |
Conread position: | 18-197 |
Cow position: | chr21:27863238-27863418 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 131 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 22, 119 |
Conread position: | 19-190 |
Cow position: | chr21:38901042-38900873 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 134 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 168, 84 |
Conread position: | 20-154 |
Cow position: | chr21:908170-908307 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 21-160 |
Cow position: | chr21:23348323-23348460 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 105 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 21-179 |
Cow position: | chr21:6713248-6713412 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 126 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 81, 15 |
Conread position: | 21-196 |
Cow position: | chr21:9905586-9905760 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 130 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 75, 15 |
Conread position: | 23-149 |
Cow position: | chr21:5489025-5488890 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 27-186 |
Cow position: | chr21:10673381-10673225 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 100, 86 |
Conread position: | 28-172 |
Cow position: | chr21:30976997-30977145 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 118 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 10, 123 |
Conread position: | 28-177 |
Cow position: | chr21:15012702-15012552 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 119 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 12, 37 |
Conread position: | 28-180 |
Cow position: | chr21:742545-742387 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 28-186 |
Cow position: | chr21:46848862-46849024 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 126 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 28-190 |
Cow position: | chr21:641854-641686 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 127 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 30-190 |
Cow position: | chr21:26735664-26735504 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 127 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 89, 10 |
Conread position: | 31-186 |
Cow position: | chr21:43655969-43655806 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 72, 118 |
Conread position: | 32-169 |
Cow position: | chr21:13395847-13395719 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 111 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 32-169 |
Cow position: | chr21:40571205-40571345 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 71, 122 |
Conread position: | 32-189 |
Cow position: | chr21:38449186-38449348 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 127 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 32-190 |
Cow position: | chr21:5427193-5427040 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 116 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 32-190 |
Cow position: | chr21:5898143-5898303 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 128 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 78, 21 |
Conread position: | 32-190 |
Cow position: | chr21:6051771-6051602 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 32-190 |
Cow position: | chr21:6998207-6998046 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 120 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 32-190 |
Cow position: | chr21:25014774-25014931 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 83, 117 |
Conread position: | 32-190 |
Cow position: | chr21:32339478-32339641 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 125 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 32-213 |
Cow position: | chr21:438822-438640 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 133 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 82, 167 |
Conread position: | 33-214 |
Cow position: | chr21:22851180-22850995 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 132 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 36-180 |
Cow position: | chr21:8358967-8359115 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 117 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 67, 27 |
Conread position: | 36-180 |
Cow position: | chr21:20174574-20174428 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 108 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 36-180 |
Cow position: | chr21:30658123-30657980 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 108 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 36-186 |
Cow position: | chr21:31279515-31279360 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 36-190 |
Cow position: | chr21:48482268-48482431 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 124 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 36-191 |
Cow position: | chr21:33413835-33413990 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 124 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 34, 79 |
Conread position: | 36-208 |
Cow position: | chr21:23587134-23586962 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 79, 64 |
Conread position: | 36-215 |
Cow position: | chr21:8426705-8426519 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 135 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 38, 95 |
Conread position: | 38-160 |
Cow position: | chr21:3236763-3236640 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 102 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 38-170 |
Cow position: | chr21:37495684-37495824 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 38-186 |
Cow position: | chr21:20160938-20160780 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 65, 30 |
Conread position: | 38-186 |
Cow position: | chr21:32536651-32536500 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 112 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 38-191 |
Cow position: | chr21:30848688-30848843 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 126 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 38-191 |
Cow position: | chr21:49353884-49353734 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 120 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 150, 65 |
Conread position: | 39-180 |
Cow position: | chr21:24797914-24797764 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 39-186 |
Cow position: | chr21:2785242-2785389 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 39-188 |
Cow position: | chr21:30592055-30592208 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 39-196 |
Cow position: | chr21:23673004-23672838 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 131 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 64, 41 |
Conread position: | 40-178 |
Cow position: | chr21:21159061-21158923 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 40-190 |
Cow position: | chr21:1511544-1511388 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 115 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 40-190 |
Cow position: | chr21:21907183-21907335 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 113 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 43-186 |
Cow position: | chr21:2294267-2294127 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 76, 30 |
Conread position: | 48-180 |
Cow position: | chr21:14760807-14760675 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 109 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 66, 34 |
Conread position: | 48-211 |
Cow position: | chr21:8351044-8351217 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 130 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 52-180 |
Cow position: | chr21:7424767-7424904 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 108 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.