Cow genome map

Conread name: Ss1.1-LyN1-MLN01C040097.5

Conread position: 2-211
Cow position: chr27:25382417-25382211 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 66

Conread position: 3-208
Cow position: chr27:19741666-19741470 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 179, 99

Conread position: 7-211
Cow position: chr27:31386899-31386690 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 99, 24

Conread position: 9-215
Cow position: chr27:22386618-22386822 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 94

Conread position: 10-166
Cow position: chr27:4414084-4413923 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 39

Conread position: 10-178
Cow position: chr27:20561324-20561490 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 18

Conread position: 10-190
Cow position: chr27:14343705-14343527 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 67

Conread position: 10-210
Cow position: chr27:20888468-20888662 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 172, 16

Conread position: 11-166
Cow position: chr27:25790036-25790193 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 53

Conread position: 12-188
Cow position: chr27:20283377-20283555 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 5, 93

Conread position: 13-190
Cow position: chr27:15867128-15867311 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 13-208
Cow position: chr27:24477165-24477357 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 172, 13

Conread position: 14-186
Cow position: chr27:23929712-23929883 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 88

Conread position: 15-190
Cow position: chr27:21951242-21951057 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 101, 13

Conread position: 16-178
Cow position: chr27:31169364-31169202 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 10

Conread position: 16-190
Cow position: chr27:13204203-13204380 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 103, 0

Conread position: 17-208
Cow position: chr27:18435393-18435193 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 18-165
Cow position: chr27:5227573-5227427 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 24

Conread position: 18-180
Cow position: chr27:24358083-24358243 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 18

Conread position: 18-184
Cow position: chr27:10350605-10350442 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 57

Conread position: 18-186
Cow position: chr27:20749261-20749094 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 18-187
Cow position: chr27:13251769-13251934 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 32

Conread position: 18-190
Cow position: chr27:16704993-16705172 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 86, 0

Conread position: 19-186
Cow position: chr27:67977-68142 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 78

Conread position: 19-190
Cow position: chr27:16246549-16246723 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 32

Conread position: 19-190
Cow position: chr27:17397711-17397533 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 19-209
Cow position: chr27:22035631-22035436 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 20-165
Cow position: chr27:4195298-4195443 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 20

Conread position: 20-189
Cow position: chr27:6162660-6162491 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 20

Conread position: 21-214
Cow position: chr27:16284232-16284421 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 77

Conread position: 28-180
Cow position: chr27:20048387-20048544 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 29-143
Cow position: chr27:21570626-21570509 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 31-180
Cow position: chr27:22171055-22171210 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 32-162
Cow position: chr27:8792082-8791952 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 87, 79

Conread position: 32-166
Cow position: chr27:22330903-22330770 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 32-184
Cow position: chr27:22245396-22245540 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 11

Conread position: 32-186
Cow position: chr27:2957171-2957328 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 32-208
Cow position: chr27:7412148-7412331 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 179

Conread position: 33-190
Cow position: chr27:8790987-8790822 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 56

Conread position: 34-178
Cow position: chr27:27450127-27449977 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 36-179
Cow position: chr27:21448064-21447920 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 36-186
Cow position: chr27:2949558-2949411 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 31

Conread position: 36-189
Cow position: chr27:27055054-27055209 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 36-190
Cow position: chr27:1637168-1637014 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 67

Conread position: 36-190
Cow position: chr27:4944748-4944593 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 146, 0

Conread position: 36-195
Cow position: chr27:26983921-26984088 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 95

Conread position: 38-170
Cow position: chr27:16026280-16026153 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 38-180
Cow position: chr27:17102660-17102806 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 63, 120

Conread position: 38-184
Cow position: chr27:13411608-13411455 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 117

Conread position: 38-190
Cow position: chr27:15409264-15409115 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 144, 5

Conread position: 39-186
Cow position: chr27:12596543-12596693 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 39-190
Cow position: chr27:28002042-28001891 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 146, 104

Conread position: 39-191
Cow position: chr27:22497789-22497944 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 48-190
Cow position: chr27:6319693-6319840 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 48-195
Cow position: chr27:26909818-26909665 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 103

Show alignments to all cow chromosomes.