Cow genome map
Conread name: | Ss1.1-LyN1-MLN01C040097.5 |
Conread position: | 2-211 |
Cow position: | chr27:25382417-25382211 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 156 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 25, 66 |
Conread position: | 3-208 |
Cow position: | chr27:19741666-19741470 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 145 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 179, 99 |
Conread position: | 7-211 |
Cow position: | chr27:31386899-31386690 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 153 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 99, 24 |
Conread position: | 9-215 |
Cow position: | chr27:22386618-22386822 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 147 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 27, 94 |
Conread position: | 10-166 |
Cow position: | chr27:4414084-4413923 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 19, 39 |
Conread position: | 10-178 |
Cow position: | chr27:20561324-20561490 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 134 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 93, 18 |
Conread position: | 10-190 |
Cow position: | chr27:14343705-14343527 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 136 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 29, 67 |
Conread position: | 10-210 |
Cow position: | chr27:20888468-20888662 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 145 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 172, 16 |
Conread position: | 11-166 |
Cow position: | chr27:25790036-25790193 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 96, 53 |
Conread position: | 12-188 |
Cow position: | chr27:20283377-20283555 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 136 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 5, 93 |
Conread position: | 13-190 |
Cow position: | chr27:15867128-15867311 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 134 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 13-208 |
Cow position: | chr27:24477165-24477357 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 142 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 172, 13 |
Conread position: | 14-186 |
Cow position: | chr27:23929712-23929883 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 14, 88 |
Conread position: | 15-190 |
Cow position: | chr27:21951242-21951057 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 138 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 101, 13 |
Conread position: | 16-178 |
Cow position: | chr27:31169364-31169202 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 122 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 88, 10 |
Conread position: | 16-190 |
Cow position: | chr27:13204203-13204380 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 128 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 17-208 |
Cow position: | chr27:18435393-18435193 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 150 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 18-165 |
Cow position: | chr27:5227573-5227427 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 101, 24 |
Conread position: | 18-180 |
Cow position: | chr27:24358083-24358243 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 85, 18 |
Conread position: | 18-184 |
Cow position: | chr27:10350605-10350442 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 125 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 110, 57 |
Conread position: | 18-186 |
Cow position: | chr27:20749261-20749094 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 131 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 18-187 |
Cow position: | chr27:13251769-13251934 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 127 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 15, 32 |
Conread position: | 18-190 |
Cow position: | chr27:16704993-16705172 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 140 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 19-186 |
Cow position: | chr27:67977-68142 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 122 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 22, 78 |
Conread position: | 19-190 |
Cow position: | chr27:16246549-16246723 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 128 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 95, 32 |
Conread position: | 19-190 |
Cow position: | chr27:17397711-17397533 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 128 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 19-209 |
Cow position: | chr27:22035631-22035436 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 138 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 20-165 |
Cow position: | chr27:4195298-4195443 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 113 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 84, 20 |
Conread position: | 20-189 |
Cow position: | chr27:6162660-6162491 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 127 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 83, 20 |
Conread position: | 21-214 |
Cow position: | chr27:16284232-16284421 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 141 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 96, 77 |
Conread position: | 28-180 |
Cow position: | chr27:20048387-20048544 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 29-143 |
Cow position: | chr27:21570626-21570509 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 31-180 |
Cow position: | chr27:22171055-22171210 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 115 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 32-162 |
Cow position: | chr27:8792082-8791952 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 102 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 87, 79 |
Conread position: | 32-166 |
Cow position: | chr27:22330903-22330770 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 32-184 |
Cow position: | chr27:22245396-22245540 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 119 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 94, 11 |
Conread position: | 32-186 |
Cow position: | chr27:2957171-2957328 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 119 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 32-208 |
Cow position: | chr27:7412148-7412331 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 134 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 71, 179 |
Conread position: | 33-190 |
Cow position: | chr27:8790987-8790822 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 70, 56 |
Conread position: | 34-178 |
Cow position: | chr27:27450127-27449977 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 113 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 36-179 |
Cow position: | chr27:21448064-21447920 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 106 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 36-186 |
Cow position: | chr27:2949558-2949411 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 88, 31 |
Conread position: | 36-189 |
Cow position: | chr27:27055054-27055209 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 113 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 36-190 |
Cow position: | chr27:1637168-1637014 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 115 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 81, 67 |
Conread position: | 36-190 |
Cow position: | chr27:4944748-4944593 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 146, 0 |
Conread position: | 36-195 |
Cow position: | chr27:26983921-26984088 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 125 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 80, 95 |
Conread position: | 38-170 |
Cow position: | chr27:16026280-16026153 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 38-180 |
Cow position: | chr27:17102660-17102806 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 119 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 63, 120 |
Conread position: | 38-184 |
Cow position: | chr27:13411608-13411455 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 43, 117 |
Conread position: | 38-190 |
Cow position: | chr27:15409264-15409115 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 144, 5 |
Conread position: | 39-186 |
Cow position: | chr27:12596543-12596693 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 111 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 39-190 |
Cow position: | chr27:28002042-28001891 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 113 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 146, 104 |
Conread position: | 39-191 |
Cow position: | chr27:22497789-22497944 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 122 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 48-190 |
Cow position: | chr27:6319693-6319840 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 48-195 |
Cow position: | chr27:26909818-26909665 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 68, 103 |
Show alignments to all cow chromosomes.