Cow genome map

Conread name: Ss1.1-LyN1-MLN01C040097.5

Conread position: 3-185
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 107, 20

Conread position: 6-169
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 6, 36

Conread position: 6-190
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 30

Conread position: 6-201
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 44

Conread position: 6-208
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 97, 11

Conread position: 7-170
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 157

Conread position: 7-180
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 96, 22

Conread position: 7-190
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 18

Conread position: 8-180
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 83

Conread position: 8-190
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 9-153
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 9-181
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 9-186
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 10-214
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 110

Conread position: 12-186
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 91, 15

Conread position: 12-189
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 24

Conread position: 12-190
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 19

Conread position: 13-186
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 13-190
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 92

Conread position: 14-180
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 52

Conread position: 14-190
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 129

Conread position: 14-214
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 89, 17

Conread position: 14-218
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 103, 22

Conread position: 15-182
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 15-186
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 15-190
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 25

Conread position: 16-166
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 14

Conread position: 16-186
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 8

Conread position: 16-190
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 16-190
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 10

Conread position: 17-186
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 31

Conread position: 17-186
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 9

Conread position: 17-190
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 145, 11

Conread position: 17-190
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 170, 23

Conread position: 18-166
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 18-180
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 83, 21

Conread position: 18-180
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 18-180
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 18-180
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 18-186
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 18

Conread position: 18-186
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 81

Conread position: 18-186
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 96, 150

Conread position: 18-190
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 22

Conread position: 18-214
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 52

Conread position: 19-186
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 17

Conread position: 19-189
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 86

Conread position: 19-190
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 21

Conread position: 20-169
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 19

Conread position: 20-190
Cow position:
Alignm length: 173
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 21-180
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 92, 19

Conread position: 21-186
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 21-190
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 7

Conread position: 21-190
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 19

Conread position: 21-230
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 170, 19

Conread position: 22-189
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 163, 87

Conread position: 23-190
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 99

Conread position: 25-190
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 27-170
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 27-172
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 47

Conread position: 27-186
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 13

Conread position: 27-186
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 9

Conread position: 27-186
Cow position:
Alignm length: 160
Alignm identity: 132
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 27-186
Cow position:
Alignm length: 170
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 13

Conread position: 27-190
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 159, 76

Conread position: 27-190
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 28-170
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 28-180
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 28-180
Cow position:
Alignm length: 154
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 87, 75

Conread position: 28-189
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 85, 12

Conread position: 28-190
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 159, 25

Conread position: 28-190
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 86, 38

Conread position: 28-214
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 36

Conread position: 29-186
Cow position:
Alignm length: 161
Alignm identity: 134
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 87, 0

Conread position: 29-186
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 29-191
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 31-169
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 33

Conread position: 31-185
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 31-189
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 69

Conread position: 31-190
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 31-190
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 151, 0

Conread position: 31-195
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 155, 0

Conread position: 32-147
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 32-148
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 32-149
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 79

Conread position: 32-166
Cow position:
Alignm length: 140
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 32-169
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 32-186
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 28

Conread position: 32-186
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 32-186
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 32-190
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 140

Conread position: 32-190
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 43

Conread position: 32-190
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 155, 113

Conread position: 32-190
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 87, 72

Conread position: 32-190
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 10

Conread position: 32-190
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 32-191
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 75, 10

Conread position: 32-208
Cow position:
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 155, 69

Conread position: 33-214
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 81, 149

Conread position: 33-214
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 34-211
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 6

Conread position: 35-214
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 77, 141

Conread position: 36-170
Cow position:
Alignm length: 135
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 36-180
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 36-183
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 36-184
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 69

Conread position: 36-186
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 36-186
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 36-186
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 7

Conread position: 36-190
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 36-190
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 36-212
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 171

Conread position: 36-214
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 125

Conread position: 38-165
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 38-180
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 38-190
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 38-190
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 144, 64

Conread position: 38-191
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 148, 75

Conread position: 38-196
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 149, 65

Conread position: 39-163
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 39-186
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 40-154
Cow position:
Alignm length: 115
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 40-180
Cow position:
Alignm length: 141
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 40-190
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 41-179
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 41

Conread position: 43-192
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 46-160
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 47-180
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 47-186
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 48-189
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 53-186
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 62-191
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Show alignments to all cow chromosomes.