Cow genome map

Conread name: Ss1.1-LyN1-MLN01C040097.5

Conread position: 1-195
Cow position: chr4:60302790-60302979 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 111, 102

Conread position: 2-190
Cow position: chr4:58248631-58248429 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 5-177
Cow position: chr4:19504142-19503970 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 35

Conread position: 5-186
Cow position: chr4:31347981-31348153 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 11

Conread position: 7-180
Cow position: chr4:4320773-4320952 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 7-190
Cow position: chr4:17790079-17790264 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 24

Conread position: 10-155
Cow position: chr4:26306261-26306401 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 17

Conread position: 10-190
Cow position: chr4:23271498-23271310 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 86, 26

Conread position: 10-215
Cow position: chr4:18756651-18756437 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 93, 16

Conread position: 12-180
Cow position: chr4:38209760-38209936 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 16

Conread position: 12-186
Cow position: chr4:19292928-19292754 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 124

Conread position: 12-190
Cow position: chr4:34983283-34983471 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 12-190
Cow position: chr4:59015794-59015616 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 104, 65

Conread position: 12-208
Cow position: chr4:23846840-23847040 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 125

Conread position: 13-172
Cow position: chr4:51867414-51867250 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 79

Conread position: 14-160
Cow position: chr4:57556691-57556545 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 14-184
Cow position: chr4:12748212-12748379 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 162, 17

Conread position: 15-169
Cow position: chr4:14063085-14063235 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 15-190
Cow position: chr4:27657181-27657004 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 89, 21

Conread position: 16-186
Cow position: chr4:45840601-45840431 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 85, 20

Conread position: 16-190
Cow position: chr4:43579206-43579385 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 10

Conread position: 17-180
Cow position: chr4:51617788-51617960 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 19

Conread position: 17-190
Cow position: chr4:23646659-23646830 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 23

Conread position: 17-190
Cow position: chr4:30769240-30769063 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 84, 23

Conread position: 17-190
Cow position: chr4:59105474-59105655 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 18-178
Cow position: chr4:39007705-39007545 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 96, 46

Conread position: 18-184
Cow position: chr4:40393019-40392850 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 89, 0

Conread position: 18-185
Cow position: chr4:47230790-47230964 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 18

Conread position: 18-185
Cow position: chr4:47283805-47283979 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 18

Conread position: 18-186
Cow position: chr4:19315800-19315975 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 13

Conread position: 18-186
Cow position: chr4:53126305-53126144 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 97, 46

Conread position: 18-190
Cow position: chr4:16238960-16239140 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 18-190
Cow position: chr4:22849294-22849463 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 18-190
Cow position: chr4:25929417-25929244 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 95, 79

Conread position: 18-190
Cow position: chr4:33360301-33360132 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 23

Conread position: 18-190
Cow position: chr4:35638698-35638875 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 36

Conread position: 18-190
Cow position: chr4:52823194-52823374 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 18-190
Cow position: chr4:61608758-61608937 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 10, 48

Conread position: 18-210
Cow position: chr4:59001933-59002130 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 18

Conread position: 19-190
Cow position: chr4:8083599-8083770 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 12, 96

Conread position: 19-191
Cow position: chr4:63471883-63472048 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 165, 84

Conread position: 19-195
Cow position: chr4:66412391-66412210 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 20-170
Cow position: chr4:12867305-12867152 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 11

Conread position: 20-180
Cow position: chr4:2537474-2537318 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 21-208
Cow position: chr4:8182429-8182627 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 39

Conread position: 22-180
Cow position: chr4:28839815-28839656 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 23-177
Cow position: chr4:61066956-61066807 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 23-186
Cow position: chr4:29384037-29384202 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 134
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 23-186
Cow position: chr4:44496565-44496406 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 23-208
Cow position: chr4:561835-561643 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 188

Conread position: 23-208
Cow position: chr4:44183917-44184104 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 94, 68

Conread position: 24-170
Cow position: chr4:68358527-68358379 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 18

Conread position: 28-170
Cow position: chr4:35939545-35939685 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 12

Conread position: 28-180
Cow position: chr4:59755452-59755605 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 13, 27

Conread position: 28-181
Cow position: chr4:20327525-20327671 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 28-186
Cow position: chr4:53347784-53347940 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 12

Conread position: 28-190
Cow position: chr4:4084259-4084422 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 88, 76

Conread position: 28-190
Cow position: chr4:30691201-30691032 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 28-190
Cow position: chr4:61391037-61391199 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 18

Conread position: 30-185
Cow position: chr4:29843015-29842860 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 31-214
Cow position: chr4:479607-479786 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 31

Conread position: 32-178
Cow position: chr4:32602020-32601875 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 32-180
Cow position: chr4:28854082-28854236 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 26

Conread position: 32-180
Cow position: chr4:66509820-66509676 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 32-184
Cow position: chr4:36929486-36929344 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 32-186
Cow position: chr4:12676989-12676832 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 32-186
Cow position: chr4:42231839-42231991 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 60

Conread position: 32-186
Cow position: chr4:61286731-61286577 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 46

Conread position: 32-190
Cow position: chr4:12052143-12052301 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 101

Conread position: 32-190
Cow position: chr4:21553895-21554058 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 32-190
Cow position: chr4:44681067-44681224 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 13

Conread position: 32-190
Cow position: chr4:49794844-49794687 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 132
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 155, 71

Conread position: 32-191
Cow position: chr4:41370747-41370914 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 32-196
Cow position: chr4:55694364-55694196 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 68

Conread position: 33-185
Cow position: chr4:961472-961617 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 33-186
Cow position: chr4:21065218-21065069 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 33-190
Cow position: chr4:22860534-22860682 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 33-205
Cow position: chr4:29291699-29291526 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 154, 86

Conread position: 36-156
Cow position: chr4:53134787-53134666 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 36-170
Cow position: chr4:49880515-49880646 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 36-177
Cow position: chr4:15236813-15236674 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 36-180
Cow position: chr4:12908559-12908412 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 36-190
Cow position: chr4:12127449-12127611 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 36-190
Cow position: chr4:13344726-13344566 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 36-190
Cow position: chr4:21506774-21506928 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 69

Conread position: 36-190
Cow position: chr4:30944144-30943982 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 36-191
Cow position: chr4:11222313-11222161 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 128, 78

Conread position: 36-192
Cow position: chr4:2770261-2770100 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 38-171
Cow position: chr4:25370282-25370152 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 38-179
Cow position: chr4:29805181-29805334 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 38-185
Cow position: chr4:14020687-14020530 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 38-186
Cow position: chr4:3837456-3837307 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 51

Conread position: 38-188
Cow position: chr4:46494489-46494333 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 34

Conread position: 39-180
Cow position: chr4:37915151-37915297 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 39-180
Cow position: chr4:66168151-66168293 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 39-197
Cow position: chr4:22482507-22482346 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 39-209
Cow position: chr4:3283267-3283439 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 78

Conread position: 39-214
Cow position: chr4:48693782-48693599 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 40-179
Cow position: chr4:16881187-16881320 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 40-182
Cow position: chr4:56570977-56570843 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 40-190
Cow position: chr4:3268185-3268337 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 6

Conread position: 45-214
Cow position: chr4:34653694-34653866 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 90

Conread position: 72-190
Cow position: chr4:56805326-56805204 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.