Cow genome map

Conread name: Ss1.1-LyN1-MLN01C040097.5

Conread position: 1-190
Cow position: chr7:9449394-9449579 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 27

Conread position: 2-180
Cow position: chr7:15559956-15559775 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 103, 34

Conread position: 2-180
Cow position: chr7:40304982-40305165 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 10

Conread position: 2-190
Cow position: chr7:8089436-8089242 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 13, 39

Conread position: 2-190
Cow position: chr7:51020056-51019855 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 5-190
Cow position: chr7:206685-206502 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 96

Conread position: 7-180
Cow position: chr7:17752536-17752712 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 34

Conread position: 7-186
Cow position: chr7:14519768-14519959 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 10-189
Cow position: chr7:50075486-50075664 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 14

Conread position: 10-190
Cow position: chr7:12329959-12330149 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 10-214
Cow position: chr7:9054246-9054047 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 94

Conread position: 11-208
Cow position: chr7:56556889-56557086 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 29

Conread position: 12-199
Cow position: chr7:41122004-41122199 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 13-191
Cow position: chr7:65695045-65695231 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 14-186
Cow position: chr7:59438713-59438533 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 26

Conread position: 14-214
Cow position: chr7:29505374-29505167 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 15-149
Cow position: chr7:32285305-32285439 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 100, 25

Conread position: 16-160
Cow position: chr7:31170700-31170847 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 24

Conread position: 16-180
Cow position: chr7:51621650-51621486 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 24

Conread position: 16-180
Cow position: chr7:63300458-63300284 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 24

Conread position: 16-186
Cow position: chr7:23256012-23255836 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 16-190
Cow position: chr7:29300519-29300690 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 167, 12

Conread position: 16-190
Cow position: chr7:36248349-36248174 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 20

Conread position: 16-190
Cow position: chr7:44942819-44942634 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 16-190
Cow position: chr7:53271266-53271089 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 15

Conread position: 16-214
Cow position: chr7:600575-600378 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 99, 0

Conread position: 17-170
Cow position: chr7:19652179-19652335 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 17-190
Cow position: chr7:11511978-11511801 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 17-190
Cow position: chr7:50442635-50442817 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 167

Conread position: 17-196
Cow position: chr7:65619175-65619361 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 124

Conread position: 18-180
Cow position: chr7:12918323-12918492 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 18-183
Cow position: chr7:16285319-16285492 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 18

Conread position: 18-186
Cow position: chr7:44596449-44596620 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 18-190
Cow position: chr7:14536029-14536204 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 18-190
Cow position: chr7:19466001-19466173 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 97, 22

Conread position: 18-190
Cow position: chr7:28441431-28441255 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 98, 18

Conread position: 18-190
Cow position: chr7:39131247-39131421 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 22

Conread position: 18-196
Cow position: chr7:4893105-4892931 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 19-148
Cow position: chr7:14498768-14498902 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 19-178
Cow position: chr7:4129530-4129690 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 19-186
Cow position: chr7:40414747-40414915 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 83, 20

Conread position: 19-190
Cow position: chr7:39988989-39988811 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 19

Conread position: 19-190
Cow position: chr7:53053147-53053326 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 9

Conread position: 19-221
Cow position: chr7:25087501-25087292 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 21-180
Cow position: chr7:11066725-11066567 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 24

Conread position: 21-190
Cow position: chr7:14524727-14524556 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 44

Conread position: 21-190
Cow position: chr7:30012083-30011909 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 15

Conread position: 22-179
Cow position: chr7:15548283-15548122 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 18

Conread position: 22-190
Cow position: chr7:18016923-18016751 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 18

Conread position: 23-190
Cow position: chr7:25393554-25393376 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 112

Conread position: 26-186
Cow position: chr7:11176486-11176647 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 10

Conread position: 26-186
Cow position: chr7:58170973-58170821 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 27-186
Cow position: chr7:32884403-32884243 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 74, 21

Conread position: 28-170
Cow position: chr7:49222205-49222344 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 28-186
Cow position: chr7:5724425-5724262 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 28-186
Cow position: chr7:20537603-20537449 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 28-186
Cow position: chr7:37698055-37697887 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 17

Conread position: 28-186
Cow position: chr7:53220269-53220419 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 28-190
Cow position: chr7:24022224-24022386 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 13, 48

Conread position: 31-180
Cow position: chr7:38357404-38357552 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 72

Conread position: 32-166
Cow position: chr7:32373278-32373139 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 32-170
Cow position: chr7:40322852-40322712 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 32-180
Cow position: chr7:6116123-6116277 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 32-180
Cow position: chr7:14029550-14029397 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 32-183
Cow position: chr7:20918119-20918261 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 32-186
Cow position: chr7:28563154-28563308 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 23

Conread position: 32-186
Cow position: chr7:38429473-38429629 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 32-186
Cow position: chr7:39043894-39043748 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 56

Conread position: 32-186
Cow position: chr7:64003687-64003539 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 71

Conread position: 32-191
Cow position: chr7:2505401-2505551 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 153, 30

Conread position: 32-191
Cow position: chr7:42460911-42460742 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 32-191
Cow position: chr7:69066923-69066772 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 155, 71

Conread position: 32-214
Cow position: chr7:48020669-48020482 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 33-170
Cow position: chr7:34224379-34224243 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 129, 80

Conread position: 33-186
Cow position: chr7:34554489-34554341 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 34-208
Cow position: chr7:4765081-4764905 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 172

Conread position: 36-186
Cow position: chr7:28428510-28428361 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 80, 67

Conread position: 36-186
Cow position: chr7:31315541-31315391 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 106

Conread position: 36-190
Cow position: chr7:33698193-33698032 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 121

Conread position: 36-190
Cow position: chr7:34216443-34216286 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 28

Conread position: 36-195
Cow position: chr7:15570277-15570110 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 36-214
Cow position: chr7:12488664-12488485 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 62

Conread position: 36-214
Cow position: chr7:26909523-26909708 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 175

Conread position: 36-215
Cow position: chr7:39947007-39947195 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 178

Conread position: 38-164
Cow position: chr7:49192922-49192793 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 5

Conread position: 38-166
Cow position: chr7:30666850-30666727 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 38-170
Cow position: chr7:40344640-40344776 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 38-180
Cow position: chr7:33386154-33386010 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 19

Conread position: 38-185
Cow position: chr7:14811904-14812047 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 38-189
Cow position: chr7:48675618-48675764 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 144, 65

Conread position: 39-180
Cow position: chr7:1763655-1763512 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 40-186
Cow position: chr7:30017286-30017436 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 40-190
Cow position: chr7:18947523-18947670 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 147, 60

Conread position: 40-190
Cow position: chr7:30154773-30154929 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 40-190
Cow position: chr7:43484297-43484452 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 27

Conread position: 41-191
Cow position: chr7:33810941-33810788 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 31

Conread position: 42-180
Cow position: chr7:44698603-44698466 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 63

Conread position: 43-170
Cow position: chr7:4418016-4418141 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 43-189
Cow position: chr7:34464587-34464437 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 43-189
Cow position: chr7:64949337-64949186 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 43-190
Cow position: chr7:68144742-68144594 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 127
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 60, 47

Conread position: 47-178
Cow position: chr7:27031044-27031176 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 0

Show alignments to all cow chromosomes.