Cow genome map

Conread name: Ss1.1-LyN1-MLN01C060033.5

Conread position: 13-220
Cow position: chr22:14156038-14156252 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 69

Conread position: 13-228
Cow position: chr22:43046266-43046491 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 113

Conread position: 13-232
Cow position: chr22:22106962-22106729 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 13-280
Cow position: chr22:27513401-27513109 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 58, 42

Conread position: 13-280
Cow position: chr22:44461302-44461026 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 65, 239

Conread position: 13-297
Cow position: chr22:15355612-15355311 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 183

Conread position: 13-303
Cow position: chr22:46612079-46612375 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 13-311
Cow position: chr22:7279466-7279151 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 140

Conread position: 13-313
Cow position: chr22:18030175-18029876 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 111, 62

Conread position: 13-315
Cow position: chr22:518457-518763 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 90

Conread position: 13-315
Cow position: chr22:1483335-1483015 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 101

Conread position: 13-315
Cow position: chr22:5931163-5931485 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 13-315
Cow position: chr22:12728742-12729052 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 98

Conread position: 13-318
Cow position: chr22:48272090-48272409 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 19

Conread position: 13-319
Cow position: chr22:6498774-6499094 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 287

Conread position: 13-319
Cow position: chr22:34822231-34822546 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 5

Conread position: 13-320
Cow position: chr22:29854770-29854450 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 133

Conread position: 13-321
Cow position: chr22:324249-324565 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 129

Conread position: 13-321
Cow position: chr22:533013-532692 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 230

Conread position: 13-321
Cow position: chr22:13768229-13767919 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 81, 194

Conread position: 13-321
Cow position: chr22:24817844-24818168 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 58, 244

Conread position: 13-321
Cow position: chr22:36356983-36356666 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 63, 300

Conread position: 13-321
Cow position: chr22:41846652-41846955 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 62

Conread position: 13-343
Cow position: chr22:44516302-44516633 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 107

Conread position: 14-262
Cow position: chr22:1709902-1709635 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 147

Conread position: 14-301
Cow position: chr22:93902-94196 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 83, 121

Conread position: 14-301
Cow position: chr22:9729055-9729359 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 15-315
Cow position: chr22:13209303-13208998 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 54, 35

Conread position: 15-321
Cow position: chr22:1325055-1324722 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 124

Conread position: 15-321
Cow position: chr22:19140787-19141094 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 157

Conread position: 19-279
Cow position: chr22:21957082-21956811 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 120

Conread position: 30-321
Cow position: chr22:35668784-35669069 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 20

Conread position: 31-256
Cow position: chr22:9269082-9268859 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 178, 18

Conread position: 31-263
Cow position: chr22:32209523-32209295 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 26, 18

Conread position: 31-296
Cow position: chr22:28713743-28713477 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 19

Conread position: 31-303
Cow position: chr22:3434082-3434352 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 18

Conread position: 31-315
Cow position: chr22:696812-696529 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 19

Conread position: 31-315
Cow position: chr22:36858655-36858936 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 19

Conread position: 31-320
Cow position: chr22:11609526-11609236 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 18

Conread position: 31-321
Cow position: chr22:8486992-8487280 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 20

Conread position: 31-321
Cow position: chr22:10549614-10549325 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 19

Conread position: 31-321
Cow position: chr22:10577607-10577895 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 19

Conread position: 31-321
Cow position: chr22:14629502-14629790 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 20

Conread position: 31-321
Cow position: chr22:19600920-19601205 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 18

Conread position: 31-321
Cow position: chr22:29396985-29396698 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 18

Conread position: 31-321
Cow position: chr22:30675846-30676135 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 19

Conread position: 31-321
Cow position: chr22:32338204-32337916 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 20

Conread position: 31-321
Cow position: chr22:44381577-44381865 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 19

Conread position: 31-321
Cow position: chr22:44494144-44493856 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 31-321
Cow position: chr22:45280830-45280542 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 37-321
Cow position: chr22:44480394-44480115 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 172, 13

Conread position: 38-216
Cow position: chr22:11785192-11785367 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 12

Conread position: 38-282
Cow position: chr22:32812684-32812926 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 12

Conread position: 38-315
Cow position: chr22:10907328-10907599 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 12

Conread position: 38-316
Cow position: chr22:8734839-8735117 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 12

Conread position: 38-320
Cow position: chr22:8339289-8339018 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 20, 12

Conread position: 38-321
Cow position: chr22:22934649-22934368 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 12

Conread position: 38-321
Cow position: chr22:26105262-26105548 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 12

Conread position: 38-321
Cow position: chr22:30089274-30089001 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 175, 12

Conread position: 38-324
Cow position: chr22:46524544-46524265 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 59, 12

Conread position: 38-478
Cow position: chr22:6634928-6634470 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 309
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 30, 12

Conread position: 41-290
Cow position: chr22:34605085-34604845 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 192, 9

Conread position: 49-321
Cow position: chr22:46582034-46582296 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 160, 30

Conread position: 49-323
Cow position: chr22:46569225-46569497 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 201

Conread position: 50-321
Cow position: chr22:28784984-28784714 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 20

Conread position: 50-321
Cow position: chr22:35935298-35935567 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 52-189
Cow position: chr22:26243255-26243119 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 27

Conread position: 57-315
Cow position: chr22:39453447-39453188 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 70, 11

Conread position: 62-315
Cow position: chr22:45289732-45289490 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 101, 21

Conread position: 62-319
Cow position: chr22:15878157-15878408 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 63, 17

Conread position: 62-321
Cow position: chr22:16693474-16693218 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 63, 8

Conread position: 62-321
Cow position: chr22:36186484-36186228 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 8

Conread position: 62-336
Cow position: chr22:32019709-32019976 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 148, 17

Conread position: 66-250
Cow position: chr22:21364683-21364863 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 46

Conread position: 68-273
Cow position: chr22:15013847-15014052 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 187

Conread position: 68-313
Cow position: chr22:11802202-11802446 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 119

Conread position: 69-214
Cow position: chr22:12625525-12625669 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 140, 92

Conread position: 69-321
Cow position: chr22:21592269-21592020 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 70-187
Cow position: chr22:28129598-28129482 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 70-194
Cow position: chr22:12969548-12969676 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 80

Conread position: 70-221
Cow position: chr22:34596710-34596558 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 148, 0

Conread position: 70-234
Cow position: chr22:3296908-3297073 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 70-250
Cow position: chr22:35162806-35162987 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 146
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 139, 0

Conread position: 70-263
Cow position: chr22:6339504-6339311 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 70-263
Cow position: chr22:42500518-42500712 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-265
Cow position: chr22:288786-288977 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 140, 74

Conread position: 70-266
Cow position: chr22:12226046-12226244 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 117, 0

Conread position: 70-273
Cow position: chr22:7155504-7155300 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-273
Cow position: chr22:15495254-15495051 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 148, 101

Conread position: 70-276
Cow position: chr22:26338161-26337954 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 139, 0

Conread position: 70-280
Cow position: chr22:39473775-39473986 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 27

Conread position: 70-287
Cow position: chr22:137667-137453 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 197, 45

Conread position: 70-297
Cow position: chr22:39465696-39465924 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-299
Cow position: chr22:51361-51133 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 203

Conread position: 70-301
Cow position: chr22:15854298-15854052 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 70-302
Cow position: chr22:5315086-5314849 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 70-303
Cow position: chr22:8595163-8595398 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 70-303
Cow position: chr22:18808384-18808617 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 76

Conread position: 70-303
Cow position: chr22:18812065-18812298 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 76

Conread position: 70-303
Cow position: chr22:46440593-46440820 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 207, 127

Conread position: 70-306
Cow position: chr22:46033074-46032838 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 139, 21

Conread position: 70-315
Cow position: chr22:1026852-1026610 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 39, 46

Conread position: 70-315
Cow position: chr22:3806466-3806217 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 27

Conread position: 70-315
Cow position: chr22:12869609-12869855 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 214

Conread position: 70-315
Cow position: chr22:13775351-13775106 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 200

Conread position: 70-315
Cow position: chr22:14822809-14823053 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 130, 209

Conread position: 70-315
Cow position: chr22:17893703-17893944 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 138, 5

Conread position: 70-315
Cow position: chr22:31332027-31332272 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 27

Conread position: 70-315
Cow position: chr22:38963122-38962878 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 140, 11

Conread position: 70-315
Cow position: chr22:40384743-40384505 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 70-315
Cow position: chr22:40589235-40589005 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 90, 0

Conread position: 70-317
Cow position: chr22:19822030-19821785 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 40

Conread position: 70-318
Cow position: chr22:35904333-35904570 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 140, 164

Conread position: 70-319
Cow position: chr22:5014931-5014685 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 182

Conread position: 70-319
Cow position: chr22:7100932-7101184 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 138, 0

Conread position: 70-319
Cow position: chr22:34171188-34170938 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-321
Cow position: chr22:3303808-3304059 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 138

Conread position: 70-321
Cow position: chr22:5624921-5625168 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 70-321
Cow position: chr22:10601718-10601466 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 70-321
Cow position: chr22:15309118-15309370 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 70-321
Cow position: chr22:17325636-17325886 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 206

Conread position: 70-321
Cow position: chr22:18603960-18604212 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-321
Cow position: chr22:25942101-25941852 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 170

Conread position: 70-321
Cow position: chr22:28556539-28556287 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-321
Cow position: chr22:29956355-29956603 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 140, 120

Conread position: 70-321
Cow position: chr22:31315389-31315137 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-321
Cow position: chr22:33952105-33952357 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-321
Cow position: chr22:36556288-36556537 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 139, 117

Conread position: 70-321
Cow position: chr22:36572679-36572930 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 139, 117

Conread position: 70-321
Cow position: chr22:37290997-37291246 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 27

Conread position: 70-332
Cow position: chr22:42994019-42993755 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 71-282
Cow position: chr22:33799164-33799377 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 71-320
Cow position: chr22:45014196-45014446 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 40, 158

Conread position: 71-321
Cow position: chr22:25968803-25969050 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 119

Conread position: 71-321
Cow position: chr22:44399397-44399146 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 72-209
Cow position: chr22:25725161-25725299 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 133, 0

Conread position: 72-226
Cow position: chr22:44366367-44366522 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 129
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 136, 0

Conread position: 72-244
Cow position: chr22:3714660-3714833 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 137, 0

Conread position: 72-269
Cow position: chr22:839829-840026 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 146, 43

Conread position: 72-303
Cow position: chr22:40373245-40373016 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 110

Conread position: 72-315
Cow position: chr22:37269942-37269698 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 72-315
Cow position: chr22:44100496-44100740 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 72-319
Cow position: chr22:43235680-43235431 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 72-321
Cow position: chr22:539978-539729 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 207

Conread position: 72-321
Cow position: chr22:557859-558108 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 78

Conread position: 72-321
Cow position: chr22:981134-980884 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 72-321
Cow position: chr22:3275514-3275759 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 164

Conread position: 72-321
Cow position: chr22:18197121-18196871 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 72-321
Cow position: chr22:20237989-20238239 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 72-321
Cow position: chr22:21193359-21193608 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 157

Conread position: 75-298
Cow position: chr22:46578885-46579110 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 98

Conread position: 75-321
Cow position: chr22:27307124-27307371 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 80-315
Cow position: chr22:17994479-17994710 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 81-230
Cow position: chr22:29185291-29185443 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 81-263
Cow position: chr22:19305288-19305470 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 85

Conread position: 81-313
Cow position: chr22:2390697-2390928 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 128, 84

Conread position: 81-315
Cow position: chr22:3271272-3271507 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 129, 0

Conread position: 81-321
Cow position: chr22:13721905-13722147 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 83-296
Cow position: chr22:28043103-28042892 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 122, 51

Conread position: 85-303
Cow position: chr22:35917949-35918165 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 185

Conread position: 86-321
Cow position: chr22:10933398-10933630 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 79

Conread position: 89-302
Cow position: chr22:41169729-41169514 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 13, 56

Conread position: 90-266
Cow position: chr22:36504205-36504382 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 90-306
Cow position: chr22:40609239-40609023 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 91, 96

Conread position: 91-321
Cow position: chr22:9047441-9047221 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 60

Conread position: 102-311
Cow position: chr22:39039166-39039373 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 107, 136

Conread position: 102-315
Cow position: chr22:283169-283381 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 8, 154

Conread position: 102-321
Cow position: chr22:1518214-1518433 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 103, 85

Conread position: 102-321
Cow position: chr22:42230639-42230850 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 109, 27

Conread position: 103-324
Cow position: chr22:8118434-8118649 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 23

Conread position: 105-272
Cow position: chr22:38552857-38552688 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 148

Conread position: 106-306
Cow position: chr22:8646966-8647170 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 115-280
Cow position: chr22:11970668-11970834 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 103, 0

Conread position: 115-315
Cow position: chr22:30173130-30172935 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 119-227
Cow position: chr22:31406847-31406738 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 121-314
Cow position: chr22:10784517-10784326 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 125-333
Cow position: chr22:15954232-15954445 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 209

Conread position: 127-275
Cow position: chr22:583317-583466 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 130-321
Cow position: chr22:5295135-5294933 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 23

Conread position: 140-306
Cow position: chr22:10327138-10326975 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 68, 98

Conread position: 140-321
Cow position: chr22:28997754-28997936 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 14

Conread position: 141-315
Cow position: chr22:1311140-1311314 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 30, 54

Conread position: 147-321
Cow position: chr22:37536709-37536879 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 70, 57

Conread position: 150-321
Cow position: chr22:2561983-2562150 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 59, 101

Conread position: 152-321
Cow position: chr22:17811862-17812032 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 158-321
Cow position: chr22:23867259-23867420 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 117

Conread position: 162-321
Cow position: chr22:11768003-11768163 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 171-321
Cow position: chr22:5943461-5943612 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 171-321
Cow position: chr22:11036036-11035884 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 306-879
Cow position: chr22:693742-693157 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 77

Conread position: 307-424
Cow position: chr22:1860696-1860812 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 307-429
Cow position: chr22:44396565-44396445 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 307-524
Cow position: chr22:42771570-42771360 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 117, 60

Conread position: 307-557
Cow position: chr22:6020777-6020514 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 155
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 121, 76

Conread position: 307-573
Cow position: chr22:46547549-46547828 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 119, 80

Conread position: 307-579
Cow position: chr22:36533628-36533907 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 80

Conread position: 307-588
Cow position: chr22:44475359-44475073 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 97, 80

Conread position: 307-614
Cow position: chr22:36274925-36274605 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 71

Conread position: 307-616
Cow position: chr22:537216-536894 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 81

Conread position: 307-619
Cow position: chr22:13917618-13917293 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 80

Conread position: 307-619
Cow position: chr22:15313837-15314157 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 12, 81

Conread position: 307-669
Cow position: chr22:36183873-36183488 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 125, 80

Conread position: 307-691
Cow position: chr22:44609711-44609320 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 80

Conread position: 307-709
Cow position: chr22:34598782-34598364 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 70

Conread position: 307-714
Cow position: chr22:37073098-37073486 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 48

Conread position: 307-763
Cow position: chr22:1878908-1878425 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 81

Conread position: 307-775
Cow position: chr22:32485237-32485708 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 307-789
Cow position: chr22:20240726-20241221 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 195
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 121, 80

Conread position: 307-805
Cow position: chr22:18816270-18816790 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 307-812
Cow position: chr22:36861415-36861946 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 307-820
Cow position: chr22:37131759-37131227 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 60

Conread position: 307-822
Cow position: chr22:21589439-21588907 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 80

Conread position: 307-829
Cow position: chr22:117727-118249 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 81

Conread position: 307-835
Cow position: chr22:1319512-1318956 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 80

Conread position: 307-836
Cow position: chr22:46853458-46852903 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 80

Conread position: 307-842
Cow position: chr22:5672852-5672294 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 81

Conread position: 307-846
Cow position: chr22:1270417-1270952 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 11

Conread position: 307-846
Cow position: chr22:41419579-41420133 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 82

Conread position: 307-848
Cow position: chr22:8136089-8136657 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 32

Conread position: 307-851
Cow position: chr22:44352842-44353402 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 70

Conread position: 307-857
Cow position: chr22:42991287-42990706 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 60

Conread position: 307-860
Cow position: chr22:293045-293616 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 375
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 109, 76

Conread position: 307-861
Cow position: chr22:11031075-11030511 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 81

Conread position: 307-864
Cow position: chr22:46635599-46636165 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 29

Conread position: 307-865
Cow position: chr22:17328624-17329205 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 307-865
Cow position: chr22:19143584-19144166 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 307-865
Cow position: chr22:31334920-31335499 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 32

Conread position: 307-865
Cow position: chr22:39469408-39469985 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 307-865
Cow position: chr22:44934094-44933511 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 80

Conread position: 307-876
Cow position: chr22:36736873-36736291 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 41

Conread position: 307-878
Cow position: chr22:7277636-7277041 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 82

Conread position: 307-879
Cow position: chr22:3278239-3278834 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 68

Conread position: 307-879
Cow position: chr22:3306629-3307195 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 83

Conread position: 307-879
Cow position: chr22:5233190-5233781 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 80

Conread position: 307-879
Cow position: chr22:5932881-5933452 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 81

Conread position: 307-879
Cow position: chr22:6503562-6504132 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 78

Conread position: 307-879
Cow position: chr22:10546760-10546166 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 80

Conread position: 307-879
Cow position: chr22:15851444-15850861 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 14

Conread position: 307-879
Cow position: chr22:16200589-16200010 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 82

Conread position: 307-879
Cow position: chr22:24949945-24949345 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 80

Conread position: 307-879
Cow position: chr22:27309658-27310261 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 80

Conread position: 307-879
Cow position: chr22:31313456-31312860 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 307-879
Cow position: chr22:34168447-34167847 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 80

Conread position: 307-879
Cow position: chr22:44369509-44370098 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 89

Conread position: 307-879
Cow position: chr22:44490002-44489402 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 79

Conread position: 307-880
Cow position: chr22:35672241-35672841 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 79

Conread position: 308-740
Cow position: chr22:36267473-36267032 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 286
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 76, 13

Conread position: 309-685
Cow position: chr22:27386318-27386719 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 78

Conread position: 309-865
Cow position: chr22:560592-561167 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 78

Conread position: 313-620
Cow position: chr22:525586-525885 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 73

Conread position: 313-794
Cow position: chr22:157798-158312 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 82

Conread position: 313-852
Cow position: chr22:32347872-32348420 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 360
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 73, 150

Conread position: 313-876
Cow position: chr22:39882067-39882653 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 73

Conread position: 313-879
Cow position: chr22:5308211-5307632 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 70

Conread position: 314-879
Cow position: chr22:37265562-37264969 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 73

Conread position: 315-882
Cow position: chr22:870759-871320 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 369
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 106, 61

Conread position: 321-704
Cow position: chr22:15956599-15957002 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 259
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 12

Conread position: 321-878
Cow position: chr22:327058-327631 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 62

Conread position: 321-880
Cow position: chr22:1293395-1293974 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 62

Conread position: 325-616
Cow position: chr22:12731754-12732051 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 60, 163

Conread position: 335-860
Cow position: chr22:1321694-1321164 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 52

Conread position: 346-557
Cow position: chr22:45880036-45880256 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 78, 18

Conread position: 410-712
Cow position: chr22:27284043-27283737 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 194, 94

Conread position: 410-879
Cow position: chr22:6985254-6984770 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 375

Conread position: 420-830
Cow position: chr22:302001-302417 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 271
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 69, 76

Conread position: 421-879
Cow position: chr22:1284944-1285413 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 20

Conread position: 421-882
Cow position: chr22:33351157-33350682 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 368

Conread position: 429-791
Cow position: chr22:4065622-4065244 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 233
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 10, 0

Conread position: 441-828
Cow position: chr22:10076790-10077178 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 7

Conread position: 441-860
Cow position: chr22:9658290-9657839 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 307
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 90, 252

Conread position: 444-882
Cow position: chr22:13493468-13493056 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 288
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 153, 111

Conread position: 450-835
Cow position: chr22:309674-309285 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 260
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 66, 76

Conread position: 484-858
Cow position: chr22:44395706-44395321 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 163

Conread position: 495-879
Cow position: chr22:18475852-18476245 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 63

Conread position: 502-865
Cow position: chr22:44457220-44456843 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 14

Conread position: 507-879
Cow position: chr22:13772681-13772310 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 19

Conread position: 512-879
Cow position: chr22:10909960-10910339 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 142

Conread position: 527-835
Cow position: chr22:37067032-37067347 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 240

Conread position: 527-860
Cow position: chr22:46585429-46585775 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 265

Conread position: 572-842
Cow position: chr22:36534126-36534410 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 216

Conread position: 604-848
Cow position: chr22:526115-526360 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 10

Conread position: 606-835
Cow position: chr22:42771340-42771109 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 12

Conread position: 606-877
Cow position: chr22:45880342-45880587 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 23, 8

Conread position: 638-879
Cow position: chr22:12732311-12732540 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 119, 17

Conread position: 682-868
Cow position: chr22:40380911-40380724 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 20

Conread position: 684-860
Cow position: chr22:36180856-36180682 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 72, 40

Show alignments to all cow chromosomes.