Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C060033.5 |
| Conread position: | 11-315 |
| Cow position: | chr25:15366829-15366531 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 225 |
| Conread position: | 12-313 |
| Cow position: | chr25:35553387-35553076 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 63, 139 |
| Conread position: | 13-303 |
| Cow position: | chr25:18159081-18159373 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 40, 177 |
| Conread position: | 13-315 |
| Cow position: | chr25:30810502-30810196 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 190 |
| Conread position: | 13-315 |
| Cow position: | chr25:33838083-33837763 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 13-321 |
| Cow position: | chr25:9395121-9394805 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 61, 288 |
| Conread position: | 13-321 |
| Cow position: | chr25:17657327-17657023 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 130, 62 |
| Conread position: | 13-321 |
| Cow position: | chr25:19337619-19337944 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 13-321 |
| Cow position: | chr25:24214592-24214898 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 13-321 |
| Cow position: | chr25:32577961-32578281 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 13-321 |
| Cow position: | chr25:33688517-33688843 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 31-175 |
| Cow position: | chr25:34615591-34615450 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 31-192 |
| Cow position: | chr25:26781418-26781576 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 31-321 |
| Cow position: | chr25:11043287-11042999 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 19 |
| Conread position: | 31-321 |
| Cow position: | chr25:12939543-12939831 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 18 |
| Conread position: | 31-321 |
| Cow position: | chr25:17586355-17586641 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 31-321 |
| Cow position: | chr25:18886803-18887091 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 18 |
| Conread position: | 31-321 |
| Cow position: | chr25:20772666-20772954 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 19 |
| Conread position: | 31-321 |
| Cow position: | chr25:22150740-22150452 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 18 |
| Conread position: | 31-321 |
| Cow position: | chr25:26355823-26355537 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 31-321 |
| Cow position: | chr25:27019573-27019861 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 19 |
| Conread position: | 31-321 |
| Cow position: | chr25:29803084-29803372 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 19 |
| Conread position: | 31-321 |
| Cow position: | chr25:34344041-34344328 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 18 |
| Conread position: | 31-321 |
| Cow position: | chr25:35755579-35755865 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 18 |
| Conread position: | 35-290 |
| Cow position: | chr25:41357072-41357316 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 182, 63 |
| Conread position: | 35-321 |
| Cow position: | chr25:27534030-27534326 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 40, 213 |
| Conread position: | 38-199 |
| Cow position: | chr25:11955430-11955271 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 87, 12 |
| Conread position: | 38-314 |
| Cow position: | chr25:18179679-18179413 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 38-320 |
| Cow position: | chr25:40390052-40390328 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 192, 45 |
| Conread position: | 38-321 |
| Cow position: | chr25:450107-450387 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 101, 17 |
| Conread position: | 38-321 |
| Cow position: | chr25:16923476-16923757 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 38-321 |
| Cow position: | chr25:18209043-18209320 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 76, 12 |
| Conread position: | 68-317 |
| Cow position: | chr25:18268324-18268571 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 141, 7 |
| Conread position: | 68-321 |
| Cow position: | chr25:18190745-18191011 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 69-315 |
| Cow position: | chr25:18423347-18423104 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 143, 131 |
| Conread position: | 70-216 |
| Cow position: | chr25:32898875-32898729 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 133, 126 |
| Conread position: | 70-228 |
| Cow position: | chr25:22431384-22431226 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 70-256 |
| Cow position: | chr25:392902-392716 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 139, 5 |
| Conread position: | 70-263 |
| Cow position: | chr25:20633395-20633201 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 70-279 |
| Cow position: | chr25:9646435-9646230 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 139, 36 |
| Conread position: | 70-280 |
| Cow position: | chr25:18128864-18128659 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 70-283 |
| Cow position: | chr25:34675926-34675712 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 70-289 |
| Cow position: | chr25:18489682-18489460 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 123 |
| Conread position: | 70-296 |
| Cow position: | chr25:21949426-21949199 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 70-301 |
| Cow position: | chr25:17554843-17555072 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 47 |
| Conread position: | 70-303 |
| Cow position: | chr25:34503601-34503835 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 70-315 |
| Cow position: | chr25:11665301-11665056 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 107 |
| Conread position: | 70-315 |
| Cow position: | chr25:14962318-14962553 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 70-315 |
| Cow position: | chr25:33262077-33261843 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 140, 98 |
| Conread position: | 70-321 |
| Cow position: | chr25:10136324-10136074 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 174 |
| Conread position: | 70-321 |
| Cow position: | chr25:13959699-13959448 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 170 |
| Conread position: | 70-321 |
| Cow position: | chr25:24449605-24449853 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 70-321 |
| Cow position: | chr25:25480980-25481228 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 5 |
| Conread position: | 70-321 |
| Cow position: | chr25:26281653-26281400 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 70-321 |
| Cow position: | chr25:28862499-28862247 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 70-321 |
| Cow position: | chr25:29313683-29313931 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 26 |
| Conread position: | 70-321 |
| Cow position: | chr25:34667106-34667355 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 134, 196 |
| Conread position: | 70-321 |
| Cow position: | chr25:35568256-35568505 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 109 |
| Conread position: | 70-321 |
| Cow position: | chr25:35626589-35626833 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 57, 96 |
| Conread position: | 70-321 |
| Cow position: | chr25:36814081-36814334 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 70-321 |
| Cow position: | chr25:41120636-41120372 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 136, 27 |
| Conread position: | 70-326 |
| Cow position: | chr25:39387264-39387006 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 70-340 |
| Cow position: | chr25:18644161-18644420 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 39, 46 |
| Conread position: | 72-220 |
| Cow position: | chr25:10651912-10652061 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 72-222 |
| Cow position: | chr25:8236540-8236691 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 72-232 |
| Cow position: | chr25:12452750-12452589 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 72-278 |
| Cow position: | chr25:33990619-33990826 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 72-312 |
| Cow position: | chr25:24007534-24007293 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 72-321 |
| Cow position: | chr25:14537034-14537284 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 72-323 |
| Cow position: | chr25:29526235-29526487 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 74-303 |
| Cow position: | chr25:24655811-24656041 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 102 |
| Conread position: | 81-264 |
| Cow position: | chr25:25109409-25109593 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 81-321 |
| Cow position: | chr25:11929924-11930172 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 81-321 |
| Cow position: | chr25:35571195-35571436 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 83-316 |
| Cow position: | chr25:24205482-24205703 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 84-238 |
| Cow position: | chr25:24638274-24638428 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 91-315 |
| Cow position: | chr25:12083224-12083450 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 91-339 |
| Cow position: | chr25:22519747-22519493 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 119, 111 |
| Conread position: | 102-287 |
| Cow position: | chr25:26930458-26930272 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 102-306 |
| Cow position: | chr25:13785738-13785532 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 103-315 |
| Cow position: | chr25:18071071-18070857 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 107, 30 |
| Conread position: | 103-326 |
| Cow position: | chr25:33092467-33092689 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 8, 91 |
| Conread position: | 110-303 |
| Cow position: | chr25:23360772-23360582 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 99, 81 |
| Conread position: | 117-321 |
| Cow position: | chr25:41408198-41407990 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 118-302 |
| Cow position: | chr25:31513573-31513390 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 66 |
| Conread position: | 119-315 |
| Cow position: | chr25:34494571-34494763 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 119-321 |
| Cow position: | chr25:37648019-37647812 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 121-234 |
| Cow position: | chr25:26538744-26538630 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 129-326 |
| Cow position: | chr25:21146850-21146658 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 80, 106 |
| Conread position: | 130-281 |
| Cow position: | chr25:11827963-11828115 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 130-321 |
| Cow position: | chr25:27814053-27813866 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 125 |
| Conread position: | 137-282 |
| Cow position: | chr25:34509901-34510048 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 138-321 |
| Cow position: | chr25:35648417-35648602 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 139-321 |
| Cow position: | chr25:19923376-19923193 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 148-321 |
| Cow position: | chr25:12835012-12835189 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 150-321 |
| Cow position: | chr25:10634716-10634888 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 277-744 |
| Cow position: | chr25:33990872-33991360 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 110 |
| Conread position: | 307-550 |
| Cow position: | chr25:33665716-33665967 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 105, 45 |
| Conread position: | 307-563 |
| Cow position: | chr25:23345180-23345451 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 307-600 |
| Cow position: | chr25:12942543-12942849 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 79 |
| Conread position: | 307-795 |
| Cow position: | chr25:34656289-34656801 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 307-817 |
| Cow position: | chr25:14016322-14015799 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 76 |
| Conread position: | 307-821 |
| Cow position: | chr25:20629728-20629195 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 52 |
| Conread position: | 307-834 |
| Cow position: | chr25:17468541-17469088 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 79 |
| Conread position: | 307-835 |
| Cow position: | chr25:18060443-18060989 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 307-837 |
| Cow position: | chr25:33243977-33243479 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 341 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 309, 11 |
| Conread position: | 307-842 |
| Cow position: | chr25:11375191-11375749 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 80 |
| Conread position: | 307-842 |
| Cow position: | chr25:18027468-18028034 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 84 |
| Conread position: | 307-860 |
| Cow position: | chr25:25506807-25506229 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 80 |
| Conread position: | 307-860 |
| Cow position: | chr25:26279414-26278856 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 80 |
| Conread position: | 307-865 |
| Cow position: | chr25:13781187-13780612 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 80 |
| Conread position: | 307-865 |
| Cow position: | chr25:18889859-18890440 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 80 |
| Conread position: | 307-865 |
| Cow position: | chr25:34346860-34347417 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 80 |
| Conread position: | 307-878 |
| Cow position: | chr25:11933373-11933962 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 48 |
| Conread position: | 307-879 |
| Cow position: | chr25:8675073-8674487 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 80 |
| Conread position: | 307-879 |
| Cow position: | chr25:32580123-32579543 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 79 |
| Conread position: | 307-879 |
| Cow position: | chr25:35362272-35362861 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 149 |
| Conread position: | 307-885 |
| Cow position: | chr25:26922374-26921783 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 104 |
| Conread position: | 308-879 |
| Cow position: | chr25:20776742-20777340 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 47 |
| Conread position: | 309-713 |
| Cow position: | chr25:36240711-36240278 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 408 |
| Conread position: | 309-865 |
| Cow position: | chr25:22147650-22147070 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 78 |
| Conread position: | 309-879 |
| Cow position: | chr25:19917239-19916647 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 78 |
| Conread position: | 313-843 |
| Cow position: | chr25:18275682-18276224 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 74 |
| Conread position: | 313-865 |
| Cow position: | chr25:18255215-18255780 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 75 |
| Conread position: | 313-892 |
| Cow position: | chr25:12759448-12760065 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 64 |
| Conread position: | 322-865 |
| Cow position: | chr25:18093161-18092597 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 66 |
| Conread position: | 332-879 |
| Cow position: | chr25:17589416-17589985 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 55 |
| Conread position: | 336-879 |
| Cow position: | chr25:17560477-17561034 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 406-865 |
| Cow position: | chr25:26867272-26866797 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 389 |
| Conread position: | 421-614 |
| Cow position: | chr25:18173393-18173200 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-617 |
| Cow position: | chr25:18302818-18302625 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 448-856 |
| Cow position: | chr25:18411285-18411699 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 58 |
| Conread position: | 448-859 |
| Cow position: | chr25:19288351-19288766 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 455-877 |
| Cow position: | chr25:20494346-20493926 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 287 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 156, 57 |
| Conread position: | 465-875 |
| Cow position: | chr25:24172014-24171588 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 268 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 132, 225 |
| Conread position: | 476-879 |
| Cow position: | chr25:17562945-17563343 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 99 |
| Conread position: | 514-816 |
| Cow position: | chr25:21902002-21901705 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 103, 12 |
| Conread position: | 549-878 |
| Cow position: | chr25:23345804-23346128 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 58, 137 |
| Conread position: | 606-879 |
| Cow position: | chr25:18302612-18302332 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 76, 136 |
| Conread position: | 609-798 |
| Cow position: | chr25:12943603-12943796 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 8, 174 |
| Conread position: | 630-846 |
| Cow position: | chr25:18173146-18172937 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 636-865 |
| Cow position: | chr25:34014541-34014771 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 45, 104 |
Show alignments to all cow chromosomes.