Cow genome map

Conread name: Ss1.1-LyN1-MLN01C060033.5

Conread position: 11-315
Cow position:
Alignm length: 313
Alignm identity: 208
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 225

Conread position: 12-313
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 63, 139

Conread position: 13-303
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 40, 177

Conread position: 13-315
Cow position:
Alignm length: 316
Alignm identity: 220
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 190

Conread position: 13-315
Cow position:
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 13-321
Cow position:
Alignm length: 319
Alignm identity: 219
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 61, 288

Conread position: 13-321
Cow position:
Alignm length: 314
Alignm identity: 218
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 130, 62

Conread position: 13-321
Cow position:
Alignm length: 326
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 13-321
Cow position:
Alignm length: 312
Alignm identity: 199
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 40

Conread position: 13-321
Cow position:
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 13-321
Cow position:
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 31-175
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 31-192
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 19

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 18

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 18

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 19

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 18

Conread position: 31-321
Cow position:
Alignm length: 291
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 19

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 19

Conread position: 31-321
Cow position:
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 18

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 18

Conread position: 35-290
Cow position:
Alignm length: 257
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 182, 63

Conread position: 35-321
Cow position:
Alignm length: 299
Alignm identity: 203
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 213

Conread position: 38-199
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 87, 12

Conread position: 38-314
Cow position:
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 38-320
Cow position:
Alignm length: 286
Alignm identity: 186
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 192, 45

Conread position: 38-321
Cow position:
Alignm length: 288
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 17

Conread position: 38-321
Cow position:
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 12

Conread position: 38-321
Cow position:
Alignm length: 286
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 76, 12

Conread position: 68-317
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 141, 7

Conread position: 68-321
Cow position:
Alignm length: 267
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 69-315
Cow position:
Alignm length: 248
Alignm identity: 178
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 143, 131

Conread position: 70-216
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 133, 126

Conread position: 70-228
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 74

Conread position: 70-256
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 139, 5

Conread position: 70-263
Cow position:
Alignm length: 195
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-279
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 139, 36

Conread position: 70-280
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 70-283
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-289
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 123

Conread position: 70-296
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 134, 0

Conread position: 70-301
Cow position:
Alignm length: 233
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 47

Conread position: 70-303
Cow position:
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 70-315
Cow position:
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 107

Conread position: 70-315
Cow position:
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 30

Conread position: 70-315
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 140, 98

Conread position: 70-321
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 174

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 170

Conread position: 70-321
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 9, 13

Conread position: 70-321
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 5

Conread position: 70-321
Cow position:
Alignm length: 254
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 26

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 134, 196

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 109

Conread position: 70-321
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 57, 96

Conread position: 70-321
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 70, 0

Conread position: 70-321
Cow position:
Alignm length: 268
Alignm identity: 199
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 136, 27

Conread position: 70-326
Cow position:
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-340
Cow position:
Alignm length: 274
Alignm identity: 193
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 39, 46

Conread position: 72-220
Cow position:
Alignm length: 150
Alignm identity: 123
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 136, 0

Conread position: 72-222
Cow position:
Alignm length: 152
Alignm identity: 122
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 137, 0

Conread position: 72-232
Cow position:
Alignm length: 162
Alignm identity: 131
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 137, 0

Conread position: 72-278
Cow position:
Alignm length: 208
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 72-312
Cow position:
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 72-321
Cow position:
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 72-323
Cow position:
Alignm length: 253
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 74-303
Cow position:
Alignm length: 232
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 102

Conread position: 81-264
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 127, 0

Conread position: 81-321
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 7

Conread position: 81-321
Cow position:
Alignm length: 242
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 83-316
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 84-238
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 23

Conread position: 91-315
Cow position:
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 91-339
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 119, 111

Conread position: 102-287
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 103, 0

Conread position: 102-306
Cow position:
Alignm length: 207
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 103-315
Cow position:
Alignm length: 218
Alignm identity: 168
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 107, 30

Conread position: 103-326
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 8, 91

Conread position: 110-303
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 99, 81

Conread position: 117-321
Cow position:
Alignm length: 209
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 118-302
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 66

Conread position: 119-315
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 117, 0

Conread position: 119-321
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 90, 0

Conread position: 121-234
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 129-326
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 106

Conread position: 130-281
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 130-321
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 125

Conread position: 137-282
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 138-321
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 139-321
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 148-321
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 9

Conread position: 150-321
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 277-744
Cow position:
Alignm length: 496
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 110

Conread position: 307-550
Cow position:
Alignm length: 257
Alignm identity: 188
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 105, 45

Conread position: 307-563
Cow position:
Alignm length: 273
Alignm identity: 187
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 21, 71

Conread position: 307-600
Cow position:
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 79

Conread position: 307-795
Cow position:
Alignm length: 517
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 49

Conread position: 307-817
Cow position:
Alignm length: 535
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 76

Conread position: 307-821
Cow position:
Alignm length: 544
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 52

Conread position: 307-834
Cow position:
Alignm length: 552
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 79

Conread position: 307-835
Cow position:
Alignm length: 558
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 32

Conread position: 307-837
Cow position:
Alignm length: 537
Alignm identity: 341
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 309, 11

Conread position: 307-842
Cow position:
Alignm length: 562
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 80

Conread position: 307-842
Cow position:
Alignm length: 571
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 84

Conread position: 307-860
Cow position:
Alignm length: 583
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 80

Conread position: 307-860
Cow position:
Alignm length: 573
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 80

Conread position: 307-865
Cow position:
Alignm length: 585
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 80

Conread position: 307-865
Cow position:
Alignm length: 587
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 307-865
Cow position:
Alignm length: 574
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 80

Conread position: 307-878
Cow position:
Alignm length: 608
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 48

Conread position: 307-879
Cow position:
Alignm length: 601
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 80

Conread position: 307-879
Cow position:
Alignm length: 600
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 79

Conread position: 307-879
Cow position:
Alignm length: 594
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 149

Conread position: 307-885
Cow position:
Alignm length: 597
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 104

Conread position: 308-879
Cow position:
Alignm length: 606
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 47

Conread position: 309-713
Cow position:
Alignm length: 437
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 408

Conread position: 309-865
Cow position:
Alignm length: 586
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 78

Conread position: 309-879
Cow position:
Alignm length: 602
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 78

Conread position: 313-843
Cow position:
Alignm length: 549
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 74

Conread position: 313-865
Cow position:
Alignm length: 574
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 75

Conread position: 313-892
Cow position:
Alignm length: 619
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 64

Conread position: 322-865
Cow position:
Alignm length: 572
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 66

Conread position: 332-879
Cow position:
Alignm length: 578
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 55

Conread position: 336-879
Cow position:
Alignm length: 570
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 51

Conread position: 406-865
Cow position:
Alignm length: 478
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 389

Conread position: 421-614
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 424-617
Cow position:
Alignm length: 194
Alignm identity: 150
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 448-856
Cow position:
Alignm length: 429
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 58

Conread position: 448-859
Cow position:
Alignm length: 423
Alignm identity: 283
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 29, 15

Conread position: 455-877
Cow position:
Alignm length: 434
Alignm identity: 287
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 156, 57

Conread position: 465-875
Cow position:
Alignm length: 431
Alignm identity: 268
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 132, 225

Conread position: 476-879
Cow position:
Alignm length: 410
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 99

Conread position: 514-816
Cow position:
Alignm length: 310
Alignm identity: 207
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 103, 12

Conread position: 549-878
Cow position:
Alignm length: 340
Alignm identity: 235
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 137

Conread position: 606-879
Cow position:
Alignm length: 284
Alignm identity: 205
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 76, 136

Conread position: 609-798
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 8, 174

Conread position: 630-846
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 22

Conread position: 636-865
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 45, 104

Show alignments to all cow chromosomes.