Cow genome map

Conread name: Ss1.1-LyN1-MLN01C060033.5

Conread position: 13-196
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 13-262
Cow position:
Alignm length: 262
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 37

Conread position: 13-295
Cow position:
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 66

Conread position: 13-298
Cow position:
Alignm length: 298
Alignm identity: 199
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 5

Conread position: 13-317
Cow position:
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 269

Conread position: 13-317
Cow position:
Alignm length: 320
Alignm identity: 230
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 58, 239

Conread position: 13-321
Cow position:
Alignm length: 326
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 132

Conread position: 13-321
Cow position:
Alignm length: 337
Alignm identity: 233
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 179

Conread position: 13-321
Cow position:
Alignm length: 323
Alignm identity: 217
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 14-281
Cow position:
Alignm length: 277
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 172

Conread position: 19-315
Cow position:
Alignm length: 303
Alignm identity: 202
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 59, 161

Conread position: 31-226
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 178, 19

Conread position: 31-282
Cow position:
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 37

Conread position: 31-282
Cow position:
Alignm length: 253
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 19

Conread position: 31-297
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 19

Conread position: 31-298
Cow position:
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 19

Conread position: 31-306
Cow position:
Alignm length: 277
Alignm identity: 200
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 186, 18

Conread position: 31-315
Cow position:
Alignm length: 288
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 31-315
Cow position:
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 31-315
Cow position:
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 41

Conread position: 31-321
Cow position:
Alignm length: 293
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 19

Conread position: 31-321
Cow position:
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 31-321
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 20

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 19

Conread position: 31-321
Cow position:
Alignm length: 294
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 19

Conread position: 31-321
Cow position:
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 31-321
Cow position:
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 19

Conread position: 31-321
Cow position:
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 32-321
Cow position:
Alignm length: 292
Alignm identity: 203
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 92, 18

Conread position: 38-315
Cow position:
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 12

Conread position: 38-321
Cow position:
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 12

Conread position: 38-321
Cow position:
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 12

Conread position: 40-311
Cow position:
Alignm length: 274
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 30

Conread position: 53-280
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 62

Conread position: 62-260
Cow position:
Alignm length: 200
Alignm identity: 156
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 147, 17

Conread position: 62-321
Cow position:
Alignm length: 261
Alignm identity: 188
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 148, 21

Conread position: 65-315
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 20, 10

Conread position: 66-265
Cow position:
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 66-321
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 69-286
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 73, 62

Conread position: 70-178
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 70-204
Cow position:
Alignm length: 135
Alignm identity: 111
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 70-215
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 70-229
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 139, 0

Conread position: 70-263
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 70-273
Cow position:
Alignm length: 205
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 18

Conread position: 70-292
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-295
Cow position:
Alignm length: 231
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 70-315
Cow position:
Alignm length: 248
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 127

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 140, 163

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 168

Conread position: 70-321
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 184

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 206

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 27

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 71-291
Cow position:
Alignm length: 223
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 101

Conread position: 71-302
Cow position:
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 171

Conread position: 71-319
Cow position:
Alignm length: 250
Alignm identity: 169
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 234, 25

Conread position: 72-266
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 39, 62

Conread position: 72-282
Cow position:
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 72-298
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 72-313
Cow position:
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 162

Conread position: 72-321
Cow position:
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 75-314
Cow position:
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 22

Conread position: 76-307
Cow position:
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 77-315
Cow position:
Alignm length: 239
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 132, 0

Conread position: 78-315
Cow position:
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 81

Conread position: 80-240
Cow position:
Alignm length: 163
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 70, 25

Conread position: 89-321
Cow position:
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 103-319
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 105-306
Cow position:
Alignm length: 203
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 142

Conread position: 130-280
Cow position:
Alignm length: 152
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 131-321
Cow position:
Alignm length: 195
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 106

Conread position: 132-321
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 100

Conread position: 137-321
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 147-336
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 181, 57

Conread position: 179-319
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 185-321
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 70

Conread position: 305-812
Cow position:
Alignm length: 528
Alignm identity: 349
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 106, 82

Conread position: 307-430
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 307-430
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 307-600
Cow position:
Alignm length: 302
Alignm identity: 203
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 83

Conread position: 307-616
Cow position:
Alignm length: 313
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 11

Conread position: 307-768
Cow position:
Alignm length: 491
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 80

Conread position: 307-823
Cow position:
Alignm length: 535
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 307-830
Cow position:
Alignm length: 553
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 80

Conread position: 307-842
Cow position:
Alignm length: 565
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 29

Conread position: 307-842
Cow position:
Alignm length: 556
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 32

Conread position: 307-865
Cow position:
Alignm length: 588
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 26

Conread position: 307-865
Cow position:
Alignm length: 588
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 307-868
Cow position:
Alignm length: 583
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 80

Conread position: 307-869
Cow position:
Alignm length: 593
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 307-879
Cow position:
Alignm length: 601
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 80

Conread position: 307-879
Cow position:
Alignm length: 595
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 80

Conread position: 307-879
Cow position:
Alignm length: 610
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 84

Conread position: 307-879
Cow position:
Alignm length: 608
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 80

Conread position: 307-879
Cow position:
Alignm length: 602
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 81

Conread position: 307-879
Cow position:
Alignm length: 590
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 81

Conread position: 307-882
Cow position:
Alignm length: 598
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 80

Conread position: 308-879
Cow position:
Alignm length: 603
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 25

Conread position: 313-830
Cow position:
Alignm length: 534
Alignm identity: 349
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 14

Conread position: 318-670
Cow position:
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 60

Conread position: 322-817
Cow position:
Alignm length: 524
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 65

Conread position: 330-764
Cow position:
Alignm length: 457
Alignm identity: 301
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 92, 53

Conread position: 421-590
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 109, 0

Conread position: 421-825
Cow position:
Alignm length: 420
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 84

Conread position: 422-618
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 180, 94

Conread position: 423-750
Cow position:
Alignm length: 343
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 18

Conread position: 429-805
Cow position:
Alignm length: 390
Alignm identity: 259
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 187, 67

Conread position: 444-835
Cow position:
Alignm length: 419
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 27

Conread position: 449-620
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 155, 161

Conread position: 494-879
Cow position:
Alignm length: 404
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 298

Conread position: 496-860
Cow position:
Alignm length: 378
Alignm identity: 240
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 47

Conread position: 502-614
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 502-614
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 538-865
Cow position:
Alignm length: 335
Alignm identity: 229
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 58, 41

Conread position: 538-879
Cow position:
Alignm length: 350
Alignm identity: 239
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 52

Conread position: 606-859
Cow position:
Alignm length: 260
Alignm identity: 192
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 23, 12

Conread position: 607-879
Cow position:
Alignm length: 282
Alignm identity: 189
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 10, 169

Conread position: 616-878
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 143, 13

Conread position: 648-840
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 7, 135

Show alignments to all cow chromosomes.