Cow genome map

Conread name: Ss1.1-LyN1-MLN01C060033.5

Conread position: 13-243
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 93, 37

Conread position: 13-245
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 58, 105

Conread position: 13-265
Cow position:
Alignm length: 269
Alignm identity: 186
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 249

Conread position: 13-301
Cow position:
Alignm length: 300
Alignm identity: 213
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 65, 69

Conread position: 13-315
Cow position:
Alignm length: 305
Alignm identity: 190
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 36, 63

Conread position: 13-321
Cow position:
Alignm length: 325
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 13-321
Cow position:
Alignm length: 309
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 0

Conread position: 13-321
Cow position:
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 60

Conread position: 13-321
Cow position:
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 13-321
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 129

Conread position: 13-326
Cow position:
Alignm length: 320
Alignm identity: 209
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 78

Conread position: 15-321
Cow position:
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 254

Conread position: 17-321
Cow position:
Alignm length: 315
Alignm identity: 217
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 54, 117

Conread position: 21-322
Cow position:
Alignm length: 319
Alignm identity: 231
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 57, 12

Conread position: 31-262
Cow position:
Alignm length: 233
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 178, 19

Conread position: 31-294
Cow position:
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 19

Conread position: 31-298
Cow position:
Alignm length: 269
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 19

Conread position: 31-319
Cow position:
Alignm length: 290
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 174, 18

Conread position: 31-321
Cow position:
Alignm length: 291
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 18

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 18

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 19

Conread position: 31-321
Cow position:
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 19

Conread position: 31-326
Cow position:
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 19

Conread position: 32-296
Cow position:
Alignm length: 267
Alignm identity: 180
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 186, 30

Conread position: 38-250
Cow position:
Alignm length: 217
Alignm identity: 167
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 167, 12

Conread position: 38-281
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 142, 12

Conread position: 38-315
Cow position:
Alignm length: 282
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 12

Conread position: 38-315
Cow position:
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 12

Conread position: 38-321
Cow position:
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 12

Conread position: 57-295
Cow position:
Alignm length: 241
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 153, 88

Conread position: 62-321
Cow position:
Alignm length: 261
Alignm identity: 182
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 147, 174

Conread position: 64-178
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 68-321
Cow position:
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 219

Conread position: 69-315
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 137, 27

Conread position: 70-187
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 70-206
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 70-242
Cow position:
Alignm length: 174
Alignm identity: 148
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 27

Conread position: 70-273
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 113, 175

Conread position: 70-292
Cow position:
Alignm length: 223
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 70-297
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 134, 0

Conread position: 70-298
Cow position:
Alignm length: 230
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 183

Conread position: 70-303
Cow position:
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 222

Conread position: 70-303
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 180, 54

Conread position: 70-303
Cow position:
Alignm length: 236
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 115

Conread position: 70-303
Cow position:
Alignm length: 235
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 54

Conread position: 70-303
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 114, 171

Conread position: 70-306
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 134, 75

Conread position: 70-306
Cow position:
Alignm length: 238
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 70-315
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 148, 35

Conread position: 70-315
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 138, 222

Conread position: 70-315
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 130, 0

Conread position: 70-315
Cow position:
Alignm length: 248
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 45

Conread position: 70-319
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 121, 0

Conread position: 70-320
Cow position:
Alignm length: 253
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 39

Conread position: 70-320
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 112, 27

Conread position: 70-320
Cow position:
Alignm length: 259
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 140, 7

Conread position: 70-321
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 69, 0

Conread position: 70-321
Cow position:
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 98

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 103

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-321
Cow position:
Alignm length: 254
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 105

Conread position: 70-321
Cow position:
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 70-321
Cow position:
Alignm length: 254
Alignm identity: 188
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 139, 199

Conread position: 70-339
Cow position:
Alignm length: 273
Alignm identity: 198
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 139, 5

Conread position: 71-315
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 82, 199

Conread position: 72-250
Cow position:
Alignm length: 180
Alignm identity: 146
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 137, 0

Conread position: 72-295
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 136, 0

Conread position: 72-303
Cow position:
Alignm length: 233
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 72-320
Cow position:
Alignm length: 250
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 72-321
Cow position:
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 72-321
Cow position:
Alignm length: 252
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 72-321
Cow position:
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 72-321
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 136, 221

Conread position: 74-321
Cow position:
Alignm length: 249
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 179

Conread position: 81-321
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 46

Conread position: 81-326
Cow position:
Alignm length: 251
Alignm identity: 180
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 82, 53

Conread position: 82-321
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 118, 0

Conread position: 85-321
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 120, 0

Conread position: 85-321
Cow position:
Alignm length: 238
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 89-321
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 93-321
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 15, 144

Conread position: 97-257
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 14, 127

Conread position: 97-315
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 30, 175

Conread position: 101-266
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 57

Conread position: 102-293
Cow position:
Alignm length: 194
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 129

Conread position: 102-296
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 61

Conread position: 102-321
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 85

Conread position: 103-315
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 8, 162

Conread position: 103-318
Cow position:
Alignm length: 217
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 114-319
Cow position:
Alignm length: 207
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 162

Conread position: 117-327
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 119-315
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 90, 136

Conread position: 119-320
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 90, 0

Conread position: 129-281
Cow position:
Alignm length: 154
Alignm identity: 127
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 81, 70

Conread position: 139-321
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 143-321
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 145-315
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 140

Conread position: 150-303
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 72

Conread position: 307-523
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 115, 76

Conread position: 307-702
Cow position:
Alignm length: 417
Alignm identity: 284
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 114, 60

Conread position: 307-817
Cow position:
Alignm length: 538
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 83

Conread position: 307-828
Cow position:
Alignm length: 551
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 81

Conread position: 307-857
Cow position:
Alignm length: 580
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 18

Conread position: 307-857
Cow position:
Alignm length: 581
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 71

Conread position: 307-860
Cow position:
Alignm length: 583
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 80

Conread position: 307-865
Cow position:
Alignm length: 581
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 76

Conread position: 307-865
Cow position:
Alignm length: 587
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 21

Conread position: 307-865
Cow position:
Alignm length: 582
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 307-865
Cow position:
Alignm length: 588
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 80

Conread position: 307-865
Cow position:
Alignm length: 588
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 307-865
Cow position:
Alignm length: 595
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 82

Conread position: 307-879
Cow position:
Alignm length: 604
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 80

Conread position: 307-879
Cow position:
Alignm length: 600
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 80

Conread position: 307-879
Cow position:
Alignm length: 586
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 80

Conread position: 308-842
Cow position:
Alignm length: 580
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 44

Conread position: 309-539
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 113, 74

Conread position: 328-865
Cow position:
Alignm length: 567
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 70

Conread position: 339-875
Cow position:
Alignm length: 555
Alignm identity: 349
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 64, 44

Conread position: 368-879
Cow position:
Alignm length: 543
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 19

Conread position: 410-804
Cow position:
Alignm length: 408
Alignm identity: 269
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 162, 177

Conread position: 421-873
Cow position:
Alignm length: 465
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 54

Conread position: 427-576
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 500-861
Cow position:
Alignm length: 372
Alignm identity: 244
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 216

Conread position: 501-865
Cow position:
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 37

Conread position: 507-877
Cow position:
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 78

Conread position: 629-842
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 153

Conread position: 658-858
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 121

Conread position: 680-850
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 92

Show alignments to all cow chromosomes.