Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C080009.5 |
| Conread position: | 438-906 |
| Cow position: | chr10:36035781-36036263 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 439-825 |
| Cow position: | chr10:31821020-31820639 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 70 |
| Conread position: | 447-826 |
| Cow position: | chr10:28022061-28021693 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 61 |
| Conread position: | 473-716 |
| Cow position: | chr10:24984346-24984595 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 107, 9 |
| Conread position: | 474-716 |
| Cow position: | chr10:58740774-58741031 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 475-672 |
| Cow position: | chr10:12738377-12738168 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 82, 30 |
| Conread position: | 486-705 |
| Cow position: | chr10:7745594-7745823 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 9 |
| Conread position: | 486-705 |
| Cow position: | chr10:16721607-16721833 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 88, 19 |
| Conread position: | 486-716 |
| Cow position: | chr10:18162581-18162818 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 486-826 |
| Cow position: | chr10:32323979-32324323 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 489-705 |
| Cow position: | chr10:27183833-27183606 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 90, 16 |
| Conread position: | 493-704 |
| Cow position: | chr10:50363340-50363551 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 105, 12 |
| Conread position: | 493-705 |
| Cow position: | chr10:27736808-27736585 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 495-723 |
| Cow position: | chr10:49707323-49707574 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 70, 10 |
| Conread position: | 500-716 |
| Cow position: | chr10:11417472-11417697 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 17 |
| Conread position: | 505-828 |
| Cow position: | chr10:17076762-17077074 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 40 |
| Conread position: | 510-828 |
| Cow position: | chr10:68351962-68351648 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 36 |
| Conread position: | 523-825 |
| Cow position: | chr10:8689943-8690253 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 524-826 |
| Cow position: | chr10:8231495-8231180 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 535-701 |
| Cow position: | chr10:67698662-67698829 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 535-787 |
| Cow position: | chr10:26932523-26932271 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 566-705 |
| Cow position: | chr10:19593619-19593753 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 568-705 |
| Cow position: | chr10:48640464-48640328 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 582-723 |
| Cow position: | chr10:7726073-7726214 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 582-743 |
| Cow position: | chr10:15515418-15515577 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 634-910 |
| Cow position: | chr10:48355080-48354814 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 96 |
| Conread position: | 642-883 |
| Cow position: | chr10:40717985-40718220 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 106, 18 |
| Conread position: | 656-912 |
| Cow position: | chr10:33720647-33720392 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 8 |
| Conread position: | 657-912 |
| Cow position: | chr10:66000654-66000909 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 658-899 |
| Cow position: | chr10:36211353-36211604 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 185 |
| Conread position: | 659-912 |
| Cow position: | chr10:32421192-32421458 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 98 |
| Conread position: | 659-912 |
| Cow position: | chr10:32912625-32912381 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 178, 38 |
| Conread position: | 659-912 |
| Cow position: | chr10:60611021-60611272 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 50 |
| Conread position: | 663-906 |
| Cow position: | chr10:349881-350132 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 664-826 |
| Cow position: | chr10:17441569-17441418 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 667-880 |
| Cow position: | chr10:32983441-32983665 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 715-910 |
| Cow position: | chr10:133461-133659 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 721-912 |
| Cow position: | chr10:21388281-21388475 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.