Cow genome map

Conread name: Ss1.1-LyN1-MLN01C080009.5

Conread position: 412-833
Cow position: chr12:36597080-36596644 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 98

Conread position: 443-826
Cow position: chr12:28545075-28545451 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 270
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 49, 58

Conread position: 447-679
Cow position: chr12:39640023-39640261 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 121, 57

Conread position: 474-684
Cow position: chr12:27902761-27902544 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 32

Conread position: 474-716
Cow position: chr12:12025245-12025499 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 90, 16

Conread position: 475-689
Cow position: chr12:44476750-44476975 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 7

Conread position: 476-705
Cow position: chr12:45178173-45178417 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 31

Conread position: 485-689
Cow position: chr12:25433845-25434061 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 20

Conread position: 486-705
Cow position: chr12:6268669-6268439 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 93, 19

Conread position: 486-705
Cow position: chr12:27729619-27729852 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 70, 18

Conread position: 486-716
Cow position: chr12:33561539-33561779 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 19

Conread position: 486-828
Cow position: chr12:24176406-24176736 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 61

Conread position: 492-705
Cow position: chr12:6068688-6068913 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 72, 13

Conread position: 493-704
Cow position: chr12:11934505-11934726 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 87, 12

Conread position: 493-734
Cow position: chr12:10787354-10787608 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 66, 12

Conread position: 495-716
Cow position: chr12:44952288-44952519 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 9

Conread position: 500-711
Cow position: chr12:10354185-10353954 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 5

Conread position: 505-831
Cow position: chr12:12010539-12010221 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 510-826
Cow position: chr12:19383180-19382865 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 32, 36

Conread position: 515-824
Cow position: chr12:1435409-1435715 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 32

Conread position: 518-826
Cow position: chr12:15383465-15383161 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 24

Conread position: 524-757
Cow position: chr12:5963864-5964108 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 48, 151

Conread position: 524-767
Cow position: chr12:4475418-4475163 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 56, 0

Conread position: 524-780
Cow position: chr12:30189813-30190068 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 59, 9

Conread position: 524-865
Cow position: chr12:19189559-19189903 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 99

Conread position: 533-826
Cow position: chr12:13025285-13024966 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 146

Conread position: 541-831
Cow position: chr12:24545168-24544881 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 558-852
Cow position: chr12:12175561-12175865 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 123, 20

Conread position: 579-777
Cow position: chr12:39318228-39318031 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 629-826
Cow position: chr12:30922131-30922329 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 642-824
Cow position: chr12:32955082-32954904 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 657-911
Cow position: chr12:43226523-43226773 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 186, 101

Conread position: 659-857
Cow position: chr12:43972236-43972037 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 177, 10

Conread position: 659-912
Cow position: chr12:8540565-8540819 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 59

Conread position: 664-906
Cow position: chr12:34408693-34408445 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 97, 39

Show alignments to all cow chromosomes.