Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C080009.5 |
| Conread position: | 412-833 |
| Cow position: | |
| Alignm length: | 440 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 98 |
| Conread position: | 443-826 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 270 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 49, 58 |
| Conread position: | 447-679 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 474-684 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 32 |
| Conread position: | 474-716 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 90, 16 |
| Conread position: | 475-689 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 7 |
| Conread position: | 476-705 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 31 |
| Conread position: | 485-689 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 20 |
| Conread position: | 486-705 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 93, 19 |
| Conread position: | 486-705 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 70, 18 |
| Conread position: | 486-716 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 486-828 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 61 |
| Conread position: | 492-705 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 493-704 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 87, 12 |
| Conread position: | 493-734 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 66, 12 |
| Conread position: | 495-716 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 500-711 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 64, 5 |
| Conread position: | 505-831 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 510-826 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 32, 36 |
| Conread position: | 515-824 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 28, 32 |
| Conread position: | 518-826 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 524-757 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 48, 151 |
| Conread position: | 524-767 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 524-780 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 524-865 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 56, 99 |
| Conread position: | 533-826 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 47, 146 |
| Conread position: | 541-831 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 558-852 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 123, 20 |
| Conread position: | 579-777 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 629-826 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 642-824 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 657-911 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 186, 101 |
| Conread position: | 659-857 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 177, 10 |
| Conread position: | 659-912 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 82, 59 |
| Conread position: | 664-906 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 97, 39 |
Show alignments to all cow chromosomes.