Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C080009.5 |
| Conread position: | 471-676 |
| Cow position: | chr14:15027814-15028029 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 86, 35 |
| Conread position: | 471-716 |
| Cow position: | chr14:19813430-19813688 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 109, 34 |
| Conread position: | 473-716 |
| Cow position: | chr14:40017064-40016804 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 474-689 |
| Cow position: | chr14:5495188-5495399 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 474-689 |
| Cow position: | chr14:24935006-24935220 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 105, 32 |
| Conread position: | 474-705 |
| Cow position: | chr14:3752095-3751853 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 83, 32 |
| Conread position: | 474-716 |
| Cow position: | chr14:15828578-15828829 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 486-716 |
| Cow position: | chr14:17144647-17144885 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 70, 19 |
| Conread position: | 486-723 |
| Cow position: | chr14:21555007-21555261 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 70, 19 |
| Conread position: | 493-705 |
| Cow position: | chr14:22912458-22912680 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 87, 12 |
| Conread position: | 493-789 |
| Cow position: | chr14:32920551-32920844 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 493-826 |
| Cow position: | chr14:7939859-7940185 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 505-833 |
| Cow position: | chr14:10082843-10082518 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 510-790 |
| Cow position: | chr14:37116238-37115965 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 510-833 |
| Cow position: | chr14:26473748-26474055 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 34 |
| Conread position: | 511-705 |
| Cow position: | chr14:11963466-11963260 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 69, 201 |
| Conread position: | 513-689 |
| Cow position: | chr14:40025788-40025978 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 524-813 |
| Cow position: | chr14:7950594-7950883 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 56, 95 |
| Conread position: | 524-814 |
| Cow position: | chr14:16813695-16813969 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 238, 58 |
| Conread position: | 531-716 |
| Cow position: | chr14:1786805-1786606 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 559-790 |
| Cow position: | chr14:121382-121604 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 641-867 |
| Cow position: | chr14:8032941-8033163 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 70 |
| Conread position: | 658-826 |
| Cow position: | chr14:24445461-24445628 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 659-906 |
| Cow position: | chr14:5363275-5363035 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 223, 19 |
| Conread position: | 659-910 |
| Cow position: | chr14:26622139-26622402 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 103 |
| Conread position: | 659-911 |
| Cow position: | chr14:43081706-43081969 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 104 |
| Conread position: | 660-811 |
| Cow position: | chr14:12337360-12337508 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 663-858 |
| Cow position: | chr14:9228921-9229119 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 663-911 |
| Cow position: | chr14:25934497-25934756 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 663-912 |
| Cow position: | chr14:24206625-24206371 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 670-912 |
| Cow position: | chr14:15963639-15963896 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 93 |
| Conread position: | 721-826 |
| Cow position: | chr14:3751654-3751549 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.