Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C080009.5 |
| Conread position: | 442-780 |
| Cow position: | chr15:27126900-27126567 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 447-787 |
| Cow position: | chr15:43561372-43561023 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 447-906 |
| Cow position: | chr15:45237461-45236980 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 475-716 |
| Cow position: | chr15:15752838-15753092 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 100, 30 |
| Conread position: | 481-699 |
| Cow position: | chr15:16598473-16598688 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 486-684 |
| Cow position: | chr15:45376562-45376361 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 92, 19 |
| Conread position: | 486-703 |
| Cow position: | chr15:18692178-18692409 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 486-716 |
| Cow position: | chr15:38381748-38381510 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 492-826 |
| Cow position: | chr15:39499657-39499992 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 66 |
| Conread position: | 493-705 |
| Cow position: | chr15:52447245-52447022 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 493-825 |
| Cow position: | chr15:26127324-26127653 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 65 |
| Conread position: | 512-705 |
| Cow position: | chr15:45040579-45040786 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 518-791 |
| Cow position: | chr15:27867495-27867764 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 24, 43 |
| Conread position: | 524-790 |
| Cow position: | chr15:8453235-8453508 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 40, 88 |
| Conread position: | 524-826 |
| Cow position: | chr15:45618131-45618425 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 524-829 |
| Cow position: | chr15:37365194-37364880 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 56, 155 |
| Conread position: | 525-912 |
| Cow position: | chr15:12864197-12863806 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 165 |
| Conread position: | 540-826 |
| Cow position: | chr15:15214371-15214085 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 585-716 |
| Cow position: | chr15:3702652-3702522 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 642-848 |
| Cow position: | chr15:10314214-10314013 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 659-831 |
| Cow position: | chr15:11620660-11620841 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 104 |
| Conread position: | 664-778 |
| Cow position: | chr15:11809458-11809571 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 681-818 |
| Cow position: | chr15:3727670-3727534 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 711-912 |
| Cow position: | chr15:44219288-44219494 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 81, 122 |
| Conread position: | 717-903 |
| Cow position: | chr15:18653046-18652859 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 63 |
Show alignments to all cow chromosomes.