Cow genome map

Conread name: Ss1.1-LyN1-MLN01C080009.5

Conread position: 441-898
Cow position: chr16:32884450-32884920 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 65

Conread position: 441-906
Cow position: chr16:15125744-15126215 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 64

Conread position: 441-906
Cow position: chr16:33426336-33426818 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 64

Conread position: 442-906
Cow position: chr16:6160590-6160115 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 447-906
Cow position: chr16:33594712-33595189 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 60

Conread position: 476-705
Cow position: chr16:42046638-42046880 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 28

Conread position: 478-705
Cow position: chr16:56872391-56872150 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 30

Conread position: 482-709
Cow position: chr16:41581307-41581543 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 98, 23

Conread position: 484-705
Cow position: chr16:26790984-26791231 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 21

Conread position: 485-716
Cow position: chr16:39219961-39220198 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 79, 20

Conread position: 486-705
Cow position: chr16:3929706-3929935 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 71, 19

Conread position: 486-705
Cow position: chr16:6084040-6083808 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 19

Conread position: 486-705
Cow position: chr16:9569584-9569809 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 19

Conread position: 486-716
Cow position: chr16:16430099-16429860 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 92, 19

Conread position: 486-716
Cow position: chr16:16436245-16436007 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 94, 18

Conread position: 492-705
Cow position: chr16:35035570-35035798 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 67, 13

Conread position: 494-684
Cow position: chr16:17597694-17597887 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 11

Conread position: 494-780
Cow position: chr16:24571508-24571224 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 86

Conread position: 495-705
Cow position: chr16:43164782-43165004 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 10

Conread position: 499-701
Cow position: chr16:6087607-6087390 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 21

Conread position: 505-702
Cow position: chr16:3592982-3593192 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 505-799
Cow position: chr16:9252776-9252473 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 37, 42

Conread position: 506-705
Cow position: chr16:33986431-33986217 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 523-828
Cow position: chr16:30800002-30800333 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 97

Conread position: 524-765
Cow position: chr16:52928631-52928382 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 120

Conread position: 524-780
Cow position: chr16:9575151-9574876 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 524-824
Cow position: chr16:15879106-15878809 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 34, 96

Conread position: 524-825
Cow position: chr16:49898736-49898422 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 524-826
Cow position: chr16:54011338-54011638 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 56, 85

Conread position: 541-825
Cow position: chr16:46403701-46403984 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 103, 16

Conread position: 551-825
Cow position: chr16:33129479-33129220 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 193, 0

Conread position: 551-826
Cow position: chr16:45572716-45572991 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 262

Conread position: 566-767
Cow position: chr16:43501989-43501790 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 25, 100

Conread position: 579-716
Cow position: chr16:34760705-34760566 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 611-825
Cow position: chr16:5249382-5249595 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 186, 135

Conread position: 642-911
Cow position: chr16:19937439-19937714 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 52, 22

Conread position: 642-912
Cow position: chr16:26065651-26065925 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 79, 22

Conread position: 659-861
Cow position: chr16:8786705-8786497 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 0

Conread position: 659-912
Cow position: chr16:10444395-10444647 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 177, 118

Conread position: 659-912
Cow position: chr16:27974613-27974354 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 660-857
Cow position: chr16:32029464-32029671 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 102

Conread position: 683-802
Cow position: chr16:32173398-32173514 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 713-912
Cow position: chr16:22252708-22252911 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 120, 40

Conread position: 720-858
Cow position: chr16:7770468-7770607 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 33

Conread position: 720-912
Cow position: chr16:23495606-23495409 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 85

Conread position: 722-906
Cow position: chr16:13470025-13469842 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 58

Show alignments to all cow chromosomes.