Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C080009.5 |
| Conread position: | 442-723 |
| Cow position: | chr18:22652684-22652379 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 447-723 |
| Cow position: | chr18:48218978-48219265 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 31, 122 |
| Conread position: | 447-902 |
| Cow position: | chr18:11234334-11234793 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 38 |
| Conread position: | 473-716 |
| Cow position: | chr18:39547375-39547625 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 484-723 |
| Cow position: | chr18:311291-311054 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 92, 21 |
| Conread position: | 486-703 |
| Cow position: | chr18:56037096-56036864 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 78, 18 |
| Conread position: | 489-705 |
| Cow position: | chr18:32048262-32048030 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 75, 16 |
| Conread position: | 492-781 |
| Cow position: | chr18:4504047-4503761 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 50, 55 |
| Conread position: | 512-798 |
| Cow position: | chr18:42288874-42288569 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 174 |
| Conread position: | 520-791 |
| Cow position: | chr18:2783446-2783171 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 523-829 |
| Cow position: | chr18:1387207-1387519 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 524-823 |
| Cow position: | chr18:46864444-46864139 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 551-766 |
| Cow position: | chr18:10051185-10050974 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 564-790 |
| Cow position: | chr18:43820495-43820717 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 30, 42 |
| Conread position: | 577-826 |
| Cow position: | chr18:23431262-23431024 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 590-912 |
| Cow position: | chr18:35508456-35508141 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 27 |
| Conread position: | 596-837 |
| Cow position: | chr18:38329614-38329851 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 602-826 |
| Cow position: | chr18:49899333-49899114 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 659-872 |
| Cow position: | chr18:4940455-4940660 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 179, 68 |
| Conread position: | 659-902 |
| Cow position: | chr18:44505335-44505080 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 52, 102 |
| Conread position: | 659-911 |
| Cow position: | chr18:21549248-21548988 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 664-911 |
| Cow position: | chr18:5226870-5226631 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 218, 48 |
| Conread position: | 674-830 |
| Cow position: | chr18:51809237-51809086 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 37 |
| Conread position: | 674-911 |
| Cow position: | chr18:51822273-51822034 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 37 |
| Conread position: | 680-906 |
| Cow position: | chr18:51786165-51785941 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 151, 31 |
| Conread position: | 714-876 |
| Cow position: | chr18:5770766-5770928 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 720-912 |
| Cow position: | chr18:38904838-38905035 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 116, 33 |
| Conread position: | 739-844 |
| Cow position: | chr18:8111014-8110909 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.