Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C080009.5 |
| Conread position: | 473-702 |
| Cow position: | chr19:45999481-45999707 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 107, 32 |
| Conread position: | 473-716 |
| Cow position: | chr19:54835621-54835878 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 475-627 |
| Cow position: | chr19:11609841-11609678 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 482-705 |
| Cow position: | chr19:20712493-20712732 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 82, 24 |
| Conread position: | 484-703 |
| Cow position: | chr19:6443214-6442990 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 100, 21 |
| Conread position: | 486-716 |
| Cow position: | chr19:51619464-51619223 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 486-828 |
| Cow position: | chr19:21747066-21747415 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 155, 42 |
| Conread position: | 492-826 |
| Cow position: | chr19:22688928-22688596 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 50, 55 |
| Conread position: | 493-684 |
| Cow position: | chr19:23039522-23039727 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 86, 12 |
| Conread position: | 493-716 |
| Cow position: | chr19:25540229-25540463 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 87, 12 |
| Conread position: | 494-716 |
| Cow position: | chr19:49863615-49863831 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 83, 11 |
| Conread position: | 494-769 |
| Cow position: | chr19:26950956-26950682 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 505-764 |
| Cow position: | chr19:33517770-33517522 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 510-716 |
| Cow position: | chr19:39626583-39626365 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 519-832 |
| Cow position: | chr19:18937858-18937546 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 533-830 |
| Cow position: | chr19:24243758-24244053 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 47, 143 |
| Conread position: | 537-825 |
| Cow position: | chr19:2771837-2772107 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 542-705 |
| Cow position: | chr19:9881617-9881453 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 597-836 |
| Cow position: | chr19:8451075-8450825 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 68 |
| Conread position: | 598-826 |
| Cow position: | chr19:26678297-26678532 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 94, 66 |
| Conread position: | 612-826 |
| Cow position: | chr19:2602380-2602585 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 623-831 |
| Cow position: | chr19:14543959-14544166 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 634-825 |
| Cow position: | chr19:33734899-33735087 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 659-830 |
| Cow position: | chr19:49165069-49165251 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 110 |
| Conread position: | 659-912 |
| Cow position: | chr19:2679126-2679380 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 174, 19 |
| Conread position: | 659-912 |
| Cow position: | chr19:33743782-33743534 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 174, 14 |
| Conread position: | 660-826 |
| Cow position: | chr19:48049643-48049809 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 71, 97 |
| Conread position: | 663-912 |
| Cow position: | chr19:52753296-52753025 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 664-911 |
| Cow position: | chr19:7671528-7671281 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 169, 44 |
| Conread position: | 680-912 |
| Cow position: | chr19:40294271-40294027 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 124, 12 |
| Conread position: | 714-831 |
| Cow position: | chr19:2815781-2815668 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 721-912 |
| Cow position: | chr19:4924594-4924781 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 32 |
Show alignments to all cow chromosomes.