Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C080009.5 |
| Conread position: | 464-721 |
| Cow position: | chr20:41972425-41972166 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 54, 75 |
| Conread position: | 475-705 |
| Cow position: | chr20:31189278-31189510 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 86, 30 |
| Conread position: | 476-705 |
| Cow position: | chr20:12546433-12546203 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 28 |
| Conread position: | 486-699 |
| Cow position: | chr20:33895414-33895191 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 78, 19 |
| Conread position: | 486-705 |
| Cow position: | chr20:29588163-29588388 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 20 |
| Conread position: | 486-712 |
| Cow position: | chr20:34317260-34317477 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 486-716 |
| Cow position: | chr20:30962087-30962330 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 488-705 |
| Cow position: | chr20:35610168-35609944 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 76, 16 |
| Conread position: | 493-825 |
| Cow position: | chr20:17306813-17306479 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 275, 66 |
| Conread position: | 494-684 |
| Cow position: | chr20:40157267-40157468 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 494-705 |
| Cow position: | chr20:5896903-5897128 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 505-826 |
| Cow position: | chr20:34958876-34958562 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 523-838 |
| Cow position: | chr20:19466810-19466503 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 45, 59 |
| Conread position: | 525-906 |
| Cow position: | chr20:35705051-35704658 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 183 |
| Conread position: | 553-705 |
| Cow position: | chr20:33202079-33201926 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 571-826 |
| Cow position: | chr20:39440961-39441206 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 600-825 |
| Cow position: | chr20:37345561-37345786 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 631-826 |
| Cow position: | chr20:22402222-22402028 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 659-776 |
| Cow position: | chr20:19620858-19620740 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 659-845 |
| Cow position: | chr20:27997426-27997229 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 105 |
| Conread position: | 659-912 |
| Cow position: | chr20:34105910-34106163 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 177, 50 |
| Conread position: | 714-904 |
| Cow position: | chr20:23198373-23198182 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 65 |
Show alignments to all cow chromosomes.