Cow genome map

Conread name: Ss1.1-LyN1-MLN01C080009.5

Conread position: 441-682
Cow position: chr21:4509661-4509910 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 442-906
Cow position: chr21:24429336-24428847 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 64

Conread position: 472-716
Cow position: chr21:30090311-30090555 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 15, 34

Conread position: 473-681
Cow position: chr21:41505827-41506045 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 33

Conread position: 474-705
Cow position: chr21:9975173-9975411 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 83, 7

Conread position: 475-705
Cow position: chr21:32432764-32432520 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 31

Conread position: 475-716
Cow position: chr21:39736671-39736417 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 105, 6

Conread position: 481-831
Cow position: chr21:26576211-26575862 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 24

Conread position: 482-704
Cow position: chr21:21565343-21565108 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 8, 25

Conread position: 482-705
Cow position: chr21:11734675-11734917 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 25

Conread position: 482-705
Cow position: chr21:14780497-14780269 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 82, 23

Conread position: 485-705
Cow position: chr21:10838150-10838383 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 74, 20

Conread position: 486-684
Cow position: chr21:41374721-41374519 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 19

Conread position: 486-705
Cow position: chr21:7125434-7125661 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 78, 19

Conread position: 486-705
Cow position: chr21:8906840-8907070 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 19

Conread position: 489-716
Cow position: chr21:41838533-41838295 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 16

Conread position: 490-825
Cow position: chr21:2854407-2854753 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 15

Conread position: 494-688
Cow position: chr21:25817960-25818163 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 11

Conread position: 494-705
Cow position: chr21:10813591-10813806 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 13

Conread position: 496-705
Cow position: chr21:8913026-8913247 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 9

Conread position: 500-792
Cow position: chr21:2523669-2523382 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 27, 7

Conread position: 501-705
Cow position: chr21:9293217-9293436 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 506-705
Cow position: chr21:24983386-24983179 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 78, 110

Conread position: 510-716
Cow position: chr21:39277687-39277488 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 524-845
Cow position: chr21:3789734-3790057 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 262

Conread position: 535-836
Cow position: chr21:1597782-1598096 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 214

Conread position: 538-833
Cow position: chr21:13391621-13391326 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 101

Conread position: 558-830
Cow position: chr21:2988304-2988572 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 20

Conread position: 642-911
Cow position: chr21:7074188-7074458 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 99, 22

Conread position: 658-831
Cow position: chr21:44721912-44721741 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 659-791
Cow position: chr21:42475273-42475402 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 659-816
Cow position: chr21:23639708-23639861 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 15, 19

Conread position: 659-821
Cow position: chr21:41548131-41548292 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 659-831
Cow position: chr21:15249845-15249670 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 74

Conread position: 659-865
Cow position: chr21:8851077-8850874 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 178, 72

Conread position: 659-867
Cow position: chr21:6134684-6134892 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 172, 73

Conread position: 659-899
Cow position: chr21:24735413-24735657 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 178, 72

Conread position: 659-906
Cow position: chr21:6326687-6326936 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 177, 193

Conread position: 659-912
Cow position: chr21:20786035-20786292 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 53, 83

Conread position: 673-824
Cow position: chr21:4510115-4510266 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 721-877
Cow position: chr21:41093747-41093593 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 48

Conread position: 725-867
Cow position: chr21:39326502-39326644 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 113, 75

Show alignments to all cow chromosomes.