Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C080009.5 |
| Conread position: | 441-699 |
| Cow position: | chr22:26039809-26040084 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 34, 67 |
| Conread position: | 447-578 |
| Cow position: | chr22:28533053-28532921 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 39, 59 |
| Conread position: | 447-767 |
| Cow position: | chr22:5459225-5459553 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 474-704 |
| Cow position: | chr22:21977298-21977512 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 88, 30 |
| Conread position: | 476-705 |
| Cow position: | chr22:4012863-4013091 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 94, 29 |
| Conread position: | 481-716 |
| Cow position: | chr22:1916269-1916033 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 24 |
| Conread position: | 486-672 |
| Cow position: | chr22:40886445-40886253 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 486-705 |
| Cow position: | chr22:14796828-14796596 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 78, 13 |
| Conread position: | 486-749 |
| Cow position: | chr22:43026213-43025954 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 138, 19 |
| Conread position: | 487-716 |
| Cow position: | chr22:11165784-11166024 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 493-705 |
| Cow position: | chr22:956560-956339 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 86, 12 |
| Conread position: | 493-716 |
| Cow position: | chr22:10695347-10695120 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 493-716 |
| Cow position: | chr22:21015288-21015054 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 87, 12 |
| Conread position: | 494-684 |
| Cow position: | chr22:23235309-23235111 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 505-781 |
| Cow position: | chr22:6555542-6555270 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 42 |
| Conread position: | 512-711 |
| Cow position: | chr22:27429296-27429505 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 68, 107 |
| Conread position: | 514-828 |
| Cow position: | chr22:10468206-10467877 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 129 |
| Conread position: | 515-846 |
| Cow position: | chr22:43969685-43969362 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 518-704 |
| Cow position: | chr22:11169269-11169453 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 535-711 |
| Cow position: | chr22:4016735-4016926 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 587-826 |
| Cow position: | chr22:6193303-6193547 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 106, 73 |
| Conread position: | 634-826 |
| Cow position: | chr22:45604919-45605111 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 173, 57 |
| Conread position: | 663-906 |
| Cow position: | chr22:5653594-5653834 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 173, 115 |
| Conread position: | 666-906 |
| Cow position: | chr22:28532795-28532557 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 188 |
| Conread position: | 667-912 |
| Cow position: | chr22:26040098-26040341 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 68 |
| Conread position: | 714-912 |
| Cow position: | chr22:26851190-26851391 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 119, 39 |
| Conread position: | 721-912 |
| Cow position: | chr22:3246863-3246666 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 116, 107 |
Show alignments to all cow chromosomes.