Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C080009.5 |
| Conread position: | 443-826 |
| Cow position: | chr23:4353362-4352971 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 27 |
| Conread position: | 461-822 |
| Cow position: | chr23:10705232-10705589 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 473-716 |
| Cow position: | chr23:14321436-14321685 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 474-705 |
| Cow position: | chr23:15605854-15605609 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 82, 31 |
| Conread position: | 474-912 |
| Cow position: | chr23:36379782-36379330 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 31 |
| Conread position: | 475-716 |
| Cow position: | chr23:35715126-35714875 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 30 |
| Conread position: | 486-716 |
| Cow position: | chr23:8193658-8193417 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 68, 16 |
| Conread position: | 489-702 |
| Cow position: | chr23:19829672-19829897 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 75, 16 |
| Conread position: | 493-828 |
| Cow position: | chr23:20076670-20076322 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 494-705 |
| Cow position: | chr23:4530308-4530531 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 499-716 |
| Cow position: | chr23:36094659-36094443 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 43, 48 |
| Conread position: | 505-906 |
| Cow position: | chr23:4456079-4456492 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 510-846 |
| Cow position: | chr23:5914302-5914640 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 78, 48 |
| Conread position: | 524-780 |
| Cow position: | chr23:2501315-2501578 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 598-790 |
| Cow position: | chr23:31111247-31111437 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 95, 66 |
| Conread position: | 631-826 |
| Cow position: | chr23:2284693-2284499 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 109, 33 |
| Conread position: | 640-867 |
| Cow position: | chr23:21730260-21730489 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 107, 24 |
| Conread position: | 642-880 |
| Cow position: | chr23:39491900-39492136 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 92, 22 |
| Conread position: | 650-847 |
| Cow position: | chr23:6591231-6591036 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 149, 14 |
| Conread position: | 658-904 |
| Cow position: | chr23:38221284-38221044 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 170, 20 |
| Conread position: | 659-906 |
| Cow position: | chr23:4785701-4785446 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 659-911 |
| Cow position: | chr23:27010442-27010182 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 97 |
| Conread position: | 659-912 |
| Cow position: | chr23:4506591-4506328 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 126, 234 |
| Conread position: | 659-912 |
| Cow position: | chr23:14173865-14173596 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 107 |
| Conread position: | 660-911 |
| Cow position: | chr23:3552542-3552794 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 176, 120 |
| Conread position: | 669-911 |
| Cow position: | chr23:39092362-39092109 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 721-898 |
| Cow position: | chr23:22734657-22734481 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 58 |
Show alignments to all cow chromosomes.