Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C080009.5 |
| Conread position: | 442-777 |
| Cow position: | chr28:11209885-11209541 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 447-831 |
| Cow position: | chr28:5709753-5709373 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 58 |
| Conread position: | 460-705 |
| Cow position: | chr28:30048419-30048158 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 104, 45 |
| Conread position: | 473-705 |
| Cow position: | chr28:1464427-1464666 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 12 |
| Conread position: | 474-703 |
| Cow position: | chr28:9696960-9697195 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 475-684 |
| Cow position: | chr28:5978484-5978699 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 81, 30 |
| Conread position: | 484-716 |
| Cow position: | chr28:26861328-26861086 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 96, 21 |
| Conread position: | 486-705 |
| Cow position: | chr28:26290555-26290774 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 486-716 |
| Cow position: | chr28:1521357-1521122 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 494-716 |
| Cow position: | chr28:11772593-11772358 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 65, 11 |
| Conread position: | 495-705 |
| Cow position: | chr28:28417612-28417836 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 524-828 |
| Cow position: | chr28:34697566-34697257 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 589-912 |
| Cow position: | chr28:11095602-11095920 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 66 |
| Conread position: | 625-826 |
| Cow position: | chr28:4564201-4564008 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 658-910 |
| Cow position: | chr28:1656625-1656360 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 54, 104 |
| Conread position: | 659-831 |
| Cow position: | chr28:1286606-1286787 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 104 |
| Conread position: | 659-831 |
| Cow position: | chr28:18714323-18714155 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 659-912 |
| Cow position: | chr28:11279433-11279700 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 33 |
Show alignments to all cow chromosomes.