Cow genome map

Conread name: Ss1.1-LyN1-MLN01C080009.5

Conread position: 470-703
Cow position: chr3:81576662-81576910 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 10

Conread position: 471-705
Cow position: chr3:23035129-23034885 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 85, 34

Conread position: 471-716
Cow position: chr3:24156593-24156336 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 36

Conread position: 473-705
Cow position: chr3:77692084-77691850 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 111, 32

Conread position: 473-716
Cow position: chr3:6950341-6950095 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 33

Conread position: 475-705
Cow position: chr3:81368388-81368154 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 7

Conread position: 475-717
Cow position: chr3:67824416-67824176 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 32

Conread position: 476-652
Cow position: chr3:70485525-70485701 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 29

Conread position: 486-705
Cow position: chr3:2119263-2119493 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 182
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 18

Conread position: 486-705
Cow position: chr3:48337556-48337781 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 78, 19

Conread position: 486-705
Cow position: chr3:48565889-48566123 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 19

Conread position: 486-716
Cow position: chr3:33158964-33158735 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 19

Conread position: 486-822
Cow position: chr3:81991991-81991636 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 44, 19

Conread position: 493-691
Cow position: chr3:24503602-24503394 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 13

Conread position: 493-803
Cow position: chr3:36747688-36747993 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 25

Conread position: 493-826
Cow position: chr3:9187935-9188249 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 50, 54

Conread position: 496-689
Cow position: chr3:5640748-5640953 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 10

Conread position: 506-911
Cow position: chr3:7146731-7146315 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 27

Conread position: 524-754
Cow position: chr3:60535566-60535805 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 56, 125

Conread position: 524-793
Cow position: chr3:21278258-21277993 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 50, 20

Conread position: 524-833
Cow position: chr3:29842417-29842741 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 290

Conread position: 525-826
Cow position: chr3:51414690-51415003 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 64

Conread position: 525-826
Cow position: chr3:74406569-74406879 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 39

Conread position: 526-776
Cow position: chr3:28716741-28716980 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 526-828
Cow position: chr3:54563496-54563811 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 51, 153

Conread position: 544-826
Cow position: chr3:62739963-62740241 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 36

Conread position: 558-755
Cow position: chr3:28630041-28629846 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 558-831
Cow position: chr3:59579092-59579361 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 21

Conread position: 568-906
Cow position: chr3:63495958-63496304 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 11

Conread position: 578-705
Cow position: chr3:44569696-44569823 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 593-790
Cow position: chr3:81527483-81527288 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 593-826
Cow position: chr3:60492177-60492410 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 659-803
Cow position: chr3:3643452-3643305 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 72

Conread position: 659-837
Cow position: chr3:74797250-74797069 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 135, 118

Conread position: 659-880
Cow position: chr3:58594688-58594914 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 180, 0

Conread position: 659-912
Cow position: chr3:14756484-14756219 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 102

Conread position: 659-912
Cow position: chr3:21715057-21714811 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 214, 50

Conread position: 660-863
Cow position: chr3:68661894-68661690 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 33, 131

Conread position: 663-912
Cow position: chr3:14185487-14185745 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 160

Conread position: 663-912
Cow position: chr3:40567006-40566739 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 696-906
Cow position: chr3:71470732-71470949 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 711-835
Cow position: chr3:5052835-5052959 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.