Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C080009.5 |
| Conread position: | 474-672 |
| Cow position: | chrX:25201052-25200841 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 486-705 |
| Cow position: | chrX:15328064-15327831 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 94, 20 |
| Conread position: | 486-716 |
| Cow position: | chrX:7544561-7544807 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 22, 176 |
| Conread position: | 493-825 |
| Cow position: | chrX:29036192-29035860 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 54 |
| Conread position: | 505-826 |
| Cow position: | chrX:46813570-46813249 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 41 |
| Conread position: | 533-826 |
| Cow position: | chrX:28858847-28859150 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 553-821 |
| Cow position: | chrX:32751888-32751614 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 107, 41 |
| Conread position: | 558-833 |
| Cow position: | chrX:44745259-44744980 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 173, 20 |
| Conread position: | 587-826 |
| Cow position: | chrX:22437110-22436872 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 10 |
| Conread position: | 595-723 |
| Cow position: | chrX:47119677-47119550 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 33 |
| Conread position: | 599-776 |
| Cow position: | chrX:30026789-30026616 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 634-897 |
| Cow position: | chrX:29815804-29816062 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 204, 9 |
| Conread position: | 642-911 |
| Cow position: | chrX:45569851-45570124 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 195, 111 |
| Conread position: | 658-831 |
| Cow position: | chrX:45823706-45823887 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 34 |
| Conread position: | 659-863 |
| Cow position: | chrX:16893608-16893810 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 659-906 |
| Cow position: | chrX:38129227-38128970 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 659-911 |
| Cow position: | chrX:25266802-25267068 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 53, 85 |
| Conread position: | 660-862 |
| Cow position: | chrX:34626563-34626361 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 176, 6 |
| Conread position: | 660-911 |
| Cow position: | chrX:40315871-40316128 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 176, 72 |
| Conread position: | 664-906 |
| Cow position: | chrX:33159071-33159319 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 173, 5 |
| Conread position: | 669-906 |
| Cow position: | chrX:1742913-1742672 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 711-911 |
| Cow position: | chrX:12835050-12835257 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 126, 42 |
| Conread position: | 714-912 |
| Cow position: | chrX:31910683-31910482 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 122, 26 |
| Conread position: | 719-912 |
| Cow position: | chrX:34767706-34767511 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 10 |
| Conread position: | 732-906 |
| Cow position: | chrX:16895883-16895704 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 104, 0 |
Show alignments to all cow chromosomes.