Cow genome map

Conread name: Ss1.1-LyN1-MLN01C080083.5

Conread position: 191-1026
Cow position: chr12:1405022-1405887 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 444, 390

Conread position: 228-449
Cow position: chr12:466021-465806 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 13

Conread position: 284-1026
Cow position: chr12:21664801-21665576 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 273

Conread position: 330-1050
Cow position: chr12:21484111-21484865 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 160

Conread position: 332-539
Cow position: chr12:29499484-29499278 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 118

Conread position: 332-630
Cow position: chr12:6078398-6078084 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 90, 152

Conread position: 332-669
Cow position: chr12:36212969-36213311 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 0

Conread position: 332-1035
Cow position: chr12:758128-758853 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 15

Conread position: 336-975
Cow position: chr12:1407550-1408207 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 150

Conread position: 337-481
Cow position: chr12:33122096-33122239 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 131, 0

Conread position: 337-511
Cow position: chr12:41594751-41594925 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 61, 65

Conread position: 337-553
Cow position: chr12:23160180-23159964 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 151, 174

Conread position: 337-622
Cow position: chr12:23492004-23491729 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 337-630
Cow position: chr12:40538882-40538590 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 121, 113

Conread position: 337-711
Cow position: chr12:1499869-1500248 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 282, 40

Conread position: 337-724
Cow position: chr12:47775404-47775787 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 121, 86

Conread position: 337-737
Cow position: chr12:47167847-47168262 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 275
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 195, 267

Conread position: 337-766
Cow position: chr12:21658540-21658968 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 296
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 50, 24

Conread position: 337-776
Cow position: chr12:35110480-35110926 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 299
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 296, 76

Conread position: 337-783
Cow position: chr12:542698-542236 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 299
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 76

Conread position: 337-825
Cow position: chr12:42192954-42193444 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 325
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 101

Conread position: 337-838
Cow position: chr12:13259138-13259659 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 116

Conread position: 337-859
Cow position: chr12:21392306-21391761 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 502

Conread position: 337-860
Cow position: chr12:22565759-22566299 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 77

Conread position: 337-965
Cow position: chr12:8628478-8627837 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 299

Conread position: 337-990
Cow position: chr12:23377886-23378533 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 106

Conread position: 337-1004
Cow position: chr12:7962019-7961328 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 66

Conread position: 337-1016
Cow position: chr12:20846856-20847562 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 236

Conread position: 337-1023
Cow position: chr12:3094906-3094185 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 264

Conread position: 337-1023
Cow position: chr12:5712689-5713404 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 61

Conread position: 337-1027
Cow position: chr12:8137251-8136547 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 94

Conread position: 337-1027
Cow position: chr12:17981138-17981828 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 123

Conread position: 337-1027
Cow position: chr12:23100318-23099604 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 111

Conread position: 337-1027
Cow position: chr12:25143983-25143287 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 449
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 121, 63

Conread position: 337-1036
Cow position: chr12:30686459-30687192 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 49

Conread position: 338-598
Cow position: chr12:30141142-30141396 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 115, 108

Conread position: 338-601
Cow position: chr12:21309335-21309071 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 11, 113

Conread position: 338-1014
Cow position: chr12:47802899-47803581 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 86

Conread position: 338-1026
Cow position: chr12:20460000-20459282 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 415

Conread position: 338-1027
Cow position: chr12:32284619-32285313 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 110

Conread position: 339-439
Cow position: chr12:31330186-31330086 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 339-449
Cow position: chr12:16802322-16802212 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 339-478
Cow position: chr12:32012035-32011893 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 339-508
Cow position: chr12:24993247-24993078 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 339-524
Cow position: chr12:4200337-4200518 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 147, 0

Conread position: 339-542
Cow position: chr12:22571563-22571766 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 339-552
Cow position: chr12:27479499-27479711 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 339-553
Cow position: chr12:15940400-15940192 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 94

Conread position: 339-568
Cow position: chr12:31424075-31423846 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 339-593
Cow position: chr12:34964578-34964326 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 339-627
Cow position: chr12:25260794-25260505 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 339-631
Cow position: chr12:21430683-21430975 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 156

Conread position: 339-644
Cow position: chr12:15539518-15539824 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 112

Conread position: 339-669
Cow position: chr12:22518192-22517857 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-673
Cow position: chr12:36405948-36405609 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 112

Conread position: 339-707
Cow position: chr12:1469405-1469025 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-707
Cow position: chr12:3363662-3364043 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 339-713
Cow position: chr12:24030009-24029630 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 140

Conread position: 339-714
Cow position: chr12:21091051-21090673 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 72

Conread position: 339-744
Cow position: chr12:22480277-22479858 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 295

Conread position: 339-764
Cow position: chr12:46163459-46163902 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 0

Conread position: 339-786
Cow position: chr12:1107737-1108223 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 294

Conread position: 339-907
Cow position: chr12:27853226-27852630 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 339-910
Cow position: chr12:1437648-1438223 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 302

Conread position: 339-910
Cow position: chr12:45144776-45145367 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 220

Conread position: 339-911
Cow position: chr12:8675344-8674751 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 232

Conread position: 339-914
Cow position: chr12:34176084-34176683 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 0

Conread position: 339-915
Cow position: chr12:21201512-21202106 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 394

Conread position: 339-925
Cow position: chr12:5328189-5327581 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 143

Conread position: 339-942
Cow position: chr12:42232029-42232666 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-982
Cow position: chr12:27930072-27929395 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-1004
Cow position: chr12:6106628-6105936 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 199

Conread position: 339-1004
Cow position: chr12:35548406-35547713 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 91

Conread position: 339-1012
Cow position: chr12:1886632-1885913 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 112

Conread position: 339-1014
Cow position: chr12:1512044-1511336 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 0

Conread position: 339-1014
Cow position: chr12:17718021-17718728 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 135

Conread position: 339-1014
Cow position: chr12:25266613-25265905 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 294

Conread position: 339-1023
Cow position: chr12:20995037-20994330 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 91

Conread position: 339-1023
Cow position: chr12:22593478-22594191 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 90

Conread position: 339-1023
Cow position: chr12:32656275-32656986 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 112

Conread position: 339-1026
Cow position: chr12:62488-61767 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 0

Conread position: 339-1026
Cow position: chr12:1775195-1774474 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 95

Conread position: 339-1026
Cow position: chr12:12929183-12928470 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 112

Conread position: 339-1026
Cow position: chr12:14569095-14568384 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-1026
Cow position: chr12:21719452-21718732 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 205

Conread position: 339-1026
Cow position: chr12:23138606-23137888 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 147

Conread position: 339-1026
Cow position: chr12:27958806-27958085 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 0

Conread position: 339-1026
Cow position: chr12:28764282-28763575 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 280

Conread position: 339-1026
Cow position: chr12:31028097-31027380 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 147

Conread position: 339-1026
Cow position: chr12:38893082-38893804 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 339-1026
Cow position: chr12:39929888-39930605 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-1035
Cow position: chr12:10358418-10359146 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 150

Conread position: 339-1035
Cow position: chr12:11100968-11101697 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-1035
Cow position: chr12:12755435-12754708 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-1035
Cow position: chr12:18585396-18586122 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 173

Conread position: 339-1035
Cow position: chr12:21057975-21057264 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 98

Conread position: 339-1035
Cow position: chr12:21610312-21611052 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 83

Conread position: 339-1035
Cow position: chr12:21904092-21904806 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 85

Conread position: 339-1035
Cow position: chr12:22202948-22202232 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 451

Conread position: 339-1035
Cow position: chr12:22747934-22748665 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-1035
Cow position: chr12:24980441-24981156 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 504

Conread position: 339-1035
Cow position: chr12:37561728-37562453 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 507

Conread position: 339-1035
Cow position: chr12:41338507-41337783 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 85

Conread position: 339-1035
Cow position: chr12:42605456-42604735 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 468

Conread position: 339-1038
Cow position: chr12:27506929-27506197 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-1060
Cow position: chr12:42856809-42856057 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 152

Conread position: 340-640
Cow position: chr12:26822404-26822707 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 340-1013
Cow position: chr12:35312170-35311481 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 111

Conread position: 341-1023
Cow position: chr12:25097542-25096828 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 104

Conread position: 341-1035
Cow position: chr12:3717548-3716824 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 106

Conread position: 341-1035
Cow position: chr12:27993822-27994550 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 0

Conread position: 343-610
Cow position: chr12:21561449-21561704 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 348-1026
Cow position: chr12:21074563-21075268 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 148

Conread position: 350-511
Cow position: chr12:8843209-8843048 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 351-859
Cow position: chr12:19861429-19861933 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 102

Conread position: 353-673
Cow position: chr12:21211481-21211807 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 357-707
Cow position: chr12:536831-536469 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 0

Conread position: 360-770
Cow position: chr12:24993082-24992654 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 0

Conread position: 361-1026
Cow position: chr12:19156112-19155421 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 198

Conread position: 364-622
Cow position: chr12:41464046-41463787 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 88

Conread position: 368-1041
Cow position: chr12:17968745-17969425 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 56

Conread position: 371-612
Cow position: chr12:34050994-34051234 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 371-783
Cow position: chr12:8641546-8641960 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 283
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 248, 46

Conread position: 371-783
Cow position: chr12:24696298-24696727 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 186

Conread position: 376-601
Cow position: chr12:16674767-16674996 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 379-557
Cow position: chr12:6479549-6479374 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 379-1023
Cow position: chr12:10486240-10486881 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 422
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 54, 96

Conread position: 379-1035
Cow position: chr12:10930836-10931535 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 380-790
Cow position: chr12:21945803-21946224 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 132

Conread position: 381-630
Cow position: chr12:32354036-32354283 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 75

Conread position: 385-1035
Cow position: chr12:250548-249871 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 413

Conread position: 390-990
Cow position: chr12:17662744-17663353 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 178

Conread position: 405-783
Cow position: chr12:26870093-26870490 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 106

Conread position: 405-1027
Cow position: chr12:8773454-8774105 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 87

Conread position: 410-839
Cow position: chr12:1490949-1491410 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 411-1035
Cow position: chr12:25148825-25148169 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 9

Conread position: 421-958
Cow position: chr12:487475-488029 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 351
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 75

Conread position: 423-1012
Cow position: chr12:30501444-30502060 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 568

Conread position: 424-933
Cow position: chr12:552011-551471 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 49

Conread position: 436-672
Cow position: chr12:33689481-33689724 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 15

Conread position: 436-1026
Cow position: chr12:1476842-1476222 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 543

Conread position: 442-621
Cow position: chr12:9018055-9018239 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 443-858
Cow position: chr12:32986359-32986777 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 69

Conread position: 445-1002
Cow position: chr12:35367231-35367816 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 445-1037
Cow position: chr12:2285097-2285720 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 264

Conread position: 455-747
Cow position: chr12:31329781-31329473 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 88

Conread position: 456-966
Cow position: chr12:42797853-42798376 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 342
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 190, 27

Conread position: 461-617
Cow position: chr12:33283537-33283384 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 461-990
Cow position: chr12:36432118-36431574 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 347
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 105, 45

Conread position: 461-990
Cow position: chr12:36486900-36486356 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 340
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 45

Conread position: 461-1023
Cow position: chr12:36371483-36370908 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 353
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 105, 39

Conread position: 465-910
Cow position: chr12:41288184-41288646 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 293
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 176, 27

Conread position: 471-1014
Cow position: chr12:32757548-32758125 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 477-623
Cow position: chr12:36204608-36204754 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 80

Conread position: 477-1037
Cow position: chr12:21314574-21313980 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 375

Conread position: 487-713
Cow position: chr12:23159642-23159410 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 145, 22

Conread position: 487-916
Cow position: chr12:1174139-1173684 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 309
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 159, 26

Conread position: 489-1020
Cow position: chr12:19871084-19871650 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 220

Conread position: 490-1026
Cow position: chr12:1056637-1056068 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 390

Conread position: 490-1026
Cow position: chr12:5106928-5107498 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 492-1027
Cow position: chr12:1006888-1007457 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 538

Conread position: 497-854
Cow position: chr12:27614294-27614674 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 499-1023
Cow position: chr12:32011902-32011340 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 21

Conread position: 500-982
Cow position: chr12:35161488-35162018 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 500-1039
Cow position: chr12:35162644-35163231 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 503-764
Cow position: chr12:42194518-42194796 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 130, 268

Conread position: 512-1023
Cow position: chr12:32848471-32848996 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 17

Conread position: 516-990
Cow position: chr12:32219994-32220505 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 33

Conread position: 518-965
Cow position: chr12:8626209-8626667 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 300
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 106, 116

Conread position: 519-1041
Cow position: chr12:19197948-19198488 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 68

Conread position: 525-909
Cow position: chr12:19040519-19040928 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 534-1026
Cow position: chr12:21251397-21250874 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 182

Conread position: 545-1026
Cow position: chr12:8842126-8841618 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 277

Conread position: 553-990
Cow position: chr12:21862494-21862033 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 302

Conread position: 560-1035
Cow position: chr12:48416804-48416293 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 219

Conread position: 570-990
Cow position: chr12:15230978-15231435 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 415

Conread position: 570-998
Cow position: chr12:15796901-15797327 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 308
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 146, 63

Conread position: 571-1023
Cow position: chr12:9988736-9988250 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 573-770
Cow position: chr12:35473582-35473367 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 573-854
Cow position: chr12:5777176-5776871 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 0

Conread position: 573-938
Cow position: chr12:23521209-23520819 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 573-1023
Cow position: chr12:8839206-8839690 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 477

Conread position: 583-1037
Cow position: chr12:11582134-11582612 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 242

Conread position: 584-1026
Cow position: chr12:15925787-15925313 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 264

Conread position: 590-853
Cow position: chr12:1343425-1343708 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 263

Conread position: 592-854
Cow position: chr12:21303401-21303687 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 593-1026
Cow position: chr12:3180389-3180849 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 107

Conread position: 603-1023
Cow position: chr12:36288029-36287578 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 245

Conread position: 604-1026
Cow position: chr12:33925713-33925257 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 639-1020
Cow position: chr12:2242960-2242556 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 133

Conread position: 639-1027
Cow position: chr12:24557604-24558017 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 198

Conread position: 652-839
Cow position: chr12:21010441-21010235 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 652-942
Cow position: chr12:40306337-40306655 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 257

Conread position: 652-995
Cow position: chr12:28737563-28737931 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 246
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 19, 159

Conread position: 652-1014
Cow position: chr12:7673939-7674330 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 652-1014
Cow position: chr12:21889005-21888614 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 652-1026
Cow position: chr12:258767-259170 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 652-1026
Cow position: chr12:16302301-16301898 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 652-1026
Cow position: chr12:31829412-31829009 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 652-1026
Cow position: chr12:46112080-46111677 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 652-1035
Cow position: chr12:32147590-32147180 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 89

Conread position: 652-1035
Cow position: chr12:43681042-43681454 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 652-1041
Cow position: chr12:32340219-32339801 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 654-1027
Cow position: chr12:27436103-27435724 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 130

Conread position: 661-842
Cow position: chr12:23512125-23511931 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 668-847
Cow position: chr12:29486411-29486219 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 668-966
Cow position: chr12:41595303-41595602 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 72, 52

Conread position: 668-1023
Cow position: chr12:30141490-30141854 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 232
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 121

Conread position: 672-842
Cow position: chr12:29128297-29128116 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 91

Conread position: 672-918
Cow position: chr12:32900856-32901111 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 224

Conread position: 672-1023
Cow position: chr12:14423414-14423786 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 365

Conread position: 672-1026
Cow position: chr12:5226313-5226674 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 118

Conread position: 672-1026
Cow position: chr12:22517787-22517414 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 102

Conread position: 672-1027
Cow position: chr12:5110996-5110625 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 161

Conread position: 672-1035
Cow position: chr12:15939797-15939429 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 170

Conread position: 672-1035
Cow position: chr12:21211848-21212232 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 316

Conread position: 672-1035
Cow position: chr12:28013167-28012782 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 672-1035
Cow position: chr12:33296693-33297079 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 672-1038
Cow position: chr12:25313648-25313261 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 32

Conread position: 677-838
Cow position: chr12:1789575-1789402 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 683-1026
Cow position: chr12:15820813-15821161 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 684-994
Cow position: chr12:42795000-42795323 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 31, 68

Conread position: 695-995
Cow position: chr12:21497805-21497487 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 68

Conread position: 709-1023
Cow position: chr12:15760148-15760478 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 224
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 71, 26

Conread position: 713-1015
Cow position: chr12:41973662-41973343 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 713-1026
Cow position: chr12:21452866-21452537 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 713-1037
Cow position: chr12:28571496-28571827 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 15

Conread position: 713-1040
Cow position: chr12:36213390-36213732 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 714-1035
Cow position: chr12:24029367-24029033 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 123

Conread position: 715-990
Cow position: chr12:23159388-23159107 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 96

Conread position: 715-1026
Cow position: chr12:10075775-10076098 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 115

Conread position: 715-1035
Cow position: chr12:22979778-22979444 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 115

Conread position: 723-1035
Cow position: chr12:36569223-36568896 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 62, 0

Conread position: 725-1026
Cow position: chr12:1093025-1093340 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 105

Conread position: 728-915
Cow position: chr12:11559297-11559103 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 168

Conread position: 730-1023
Cow position: chr12:23294363-23294670 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 167

Conread position: 731-1026
Cow position: chr12:36445517-36445826 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 50, 21

Conread position: 739-1035
Cow position: chr12:31329193-31328880 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 744-1023
Cow position: chr12:21432482-21432777 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 35, 226

Conread position: 748-948
Cow position: chr12:20317459-20317663 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 150

Conread position: 748-1029
Cow position: chr12:12178082-12177798 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 127, 30

Conread position: 750-1026
Cow position: chr12:2228719-2229011 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 752-1035
Cow position: chr12:13043091-13042792 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 29, 0

Conread position: 774-1035
Cow position: chr12:22480303-22480574 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 137, 0

Conread position: 778-964
Cow position: chr12:18936011-18936207 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 133, 0

Conread position: 778-1012
Cow position: chr12:26870074-26869829 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 132, 162

Conread position: 778-1020
Cow position: chr12:24447686-24447434 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 133, 43

Conread position: 778-1035
Cow position: chr12:24205717-24205979 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 133, 61

Conread position: 780-915
Cow position: chr12:43602072-43601937 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 780-1026
Cow position: chr12:34176739-34176995 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 131, 0

Conread position: 781-1027
Cow position: chr12:15720377-15720127 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 99

Conread position: 781-1029
Cow position: chr12:19496189-19495934 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 792-999
Cow position: chr12:21089743-21089526 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 121, 185

Conread position: 792-1035
Cow position: chr12:31261213-31260960 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 119, 0

Conread position: 792-1037
Cow position: chr12:8172106-8172356 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 63, 12

Conread position: 801-1040
Cow position: chr12:23474958-23475205 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 804-1004
Cow position: chr12:19852468-19852675 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 109, 14

Conread position: 805-963
Cow position: chr12:21672562-21672730 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 805-1014
Cow position: chr12:3070067-3070286 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 108, 40

Conread position: 806-995
Cow position: chr12:39283307-39283107 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 111, 0

Conread position: 808-1027
Cow position: chr12:22686709-22686928 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 79, 172

Conread position: 809-1026
Cow position: chr12:14214274-14214501 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 104, 0

Conread position: 810-994
Cow position: chr12:1108333-1108519 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 170

Conread position: 818-1035
Cow position: chr12:6186924-6186700 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 821-1023
Cow position: chr12:3364112-3364324 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 91, 185

Conread position: 824-1023
Cow position: chr12:21946225-21946426 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 73, 103

Conread position: 824-1023
Cow position: chr12:25838511-25838720 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 830-1026
Cow position: chr12:10988591-10988795 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 67

Conread position: 833-1035
Cow position: chr12:23441702-23441490 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 864-1026
Cow position: chr12:10790978-10790806 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 864-1026
Cow position: chr12:17787373-17787201 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 887-1026
Cow position: chr12:29485361-29485220 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 910-1035
Cow position: chr12:5904856-5904981 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 910-1035
Cow position: chr12:27852326-27852201 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 912-1023
Cow position: chr12:5274038-5273927 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.