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Cow genome map

           
Conread name:
           
Ss1.1-LyN1-MLN01C080083.5
        

               
Conread position:
               
7-1030
               

               
Cow position:
               
chr26:3536555-3537612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1058
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
626, 0
               

               
Conread position:
               
271-805
               

               
Cow position:
               
chr26:31793423-31793981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
304-903
               

               
Cow position:
               
chr26:21535092-21535716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 0
               

               
Conread position:
               
328-642
               

               
Cow position:
               
chr26:27252321-27252638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
61, 181
               

               
Conread position:
               
332-594
               

               
Cow position:
               
chr26:4601433-4601173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
332-1026
               

               
Cow position:
               
chr26:5679289-5680018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 123
               

               
Conread position:
               
332-1035
               

               
Cow position:
               
chr26:17394133-17393404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 268
               

               
Conread position:
               
332-1049
               

               
Cow position:
               
chr26:35394309-35393589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
336-493
               

               
Cow position:
               
chr26:31139511-31139354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
336-905
               

               
Cow position:
               
chr26:11289919-11290501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 89
               

               
Conread position:
               
336-1026
               

               
Cow position:
               
chr26:9114799-9115524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 671
               

               
Conread position:
               
337-465
               

               
Cow position:
               
chr26:13771945-13771815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
337-508
               

               
Cow position:
               
chr26:6793173-6793345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
337-532
               

               
Cow position:
               
chr26:2245444-2245250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
182, 74
               

               
Conread position:
               
337-569
               

               
Cow position:
               
chr26:1884062-1883830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 100
               

               
Conread position:
               
337-714
               

               
Cow position:
               
chr26:2605169-2604790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 221
               

               
Conread position:
               
337-816
               

               
Cow position:
               
chr26:18035665-18036161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 297
               

               
Conread position:
               
337-825
               

               
Cow position:
               
chr26:26306509-26306025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
337-853
               

               
Cow position:
               
chr26:8654562-8654035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 133
               

               
Conread position:
               
337-915
               

               
Cow position:
               
chr26:6320874-6321470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 140
               

               
Conread position:
               
337-917
               

               
Cow position:
               
chr26:14365467-14364866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 162
               

               
Conread position:
               
337-982
               

               
Cow position:
               
chr26:33950603-33949931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
337-990
               

               
Cow position:
               
chr26:17329270-17329959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 114
               

               
Conread position:
               
337-998
               

               
Cow position:
               
chr26:9841642-9840938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 101
               

               
Conread position:
               
337-1011
               

               
Cow position:
               
chr26:12668215-12668904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 248
               

               
Conread position:
               
337-1013
               

               
Cow position:
               
chr26:21011904-21012590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 15
               

               
Conread position:
               
337-1023
               

               
Cow position:
               
chr26:25341153-25340455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
337-1026
               

               
Cow position:
               
chr26:3699735-3700445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 96
               

               
Conread position:
               
338-673
               

               
Cow position:
               
chr26:8087834-8088173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 270
               

               
Conread position:
               
338-990
               

               
Cow position:
               
chr26:4548374-4549060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 62
               

               
Conread position:
               
338-1028
               

               
Cow position:
               
chr26:30625843-30625126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
339-448
               

               
Cow position:
               
chr26:6425764-6425873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-510
               

               
Cow position:
               
chr26:4441187-4441358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-526
               

               
Cow position:
               
chr26:35561976-35562163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-539
               

               
Cow position:
               
chr26:2417630-2417430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-546
               

               
Cow position:
               
chr26:3906017-3906225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
339-612
               

               
Cow position:
               
chr26:18781774-18781501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-616
               

               
Cow position:
               
chr26:30785540-30785817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-623
               

               
Cow position:
               
chr26:6844748-6844463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
339-644
               

               
Cow position:
               
chr26:367397-367703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
339-673
               

               
Cow position:
               
chr26:3027852-3027513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 0
               

               
Conread position:
               
339-713
               

               
Cow position:
               
chr26:19348729-19348348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
339-728
               

               
Cow position:
               
chr26:21823866-21823465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 103
               

               
Conread position:
               
339-733
               

               
Cow position:
               
chr26:1638270-1637859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 65
               

               
Conread position:
               
339-744
               

               
Cow position:
               
chr26:23590423-23590844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 147
               

               
Conread position:
               
339-745
               

               
Cow position:
               
chr26:4122433-4122857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 0
               

               
Conread position:
               
339-759
               

               
Cow position:
               
chr26:2671009-2670571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
339-799
               

               
Cow position:
               
chr26:34271836-34272295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 393
               

               
Conread position:
               
339-898
               

               
Cow position:
               
chr26:4752816-4753396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 508
               

               
Conread position:
               
339-910
               

               
Cow position:
               
chr26:14896767-14897361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 135
               

               
Conread position:
               
339-911
               

               
Cow position:
               
chr26:2349406-2348810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
339-1014
               

               
Cow position:
               
chr26:8884613-8885317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 271
               

               
Conread position:
               
339-1015
               

               
Cow position:
               
chr26:17326927-17327640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 286
               

               
Conread position:
               
339-1016
               

               
Cow position:
               
chr26:9559112-9558404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 137
               

               
Conread position:
               
339-1022
               

               
Cow position:
               
chr26:2201299-2202009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 278
               

               
Conread position:
               
339-1023
               

               
Cow position:
               
chr26:1087957-1088660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 189
               

               
Conread position:
               
339-1023
               

               
Cow position:
               
chr26:1347217-1346511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 149
               

               
Conread position:
               
339-1023
               

               
Cow position:
               
chr26:35423265-35423980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 103
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr26:1389753-1390468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 30
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr26:18804598-18803883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 402
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr26:18856886-18857601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 207
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr26:28707294-28706577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 698
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr26:34264729-34265450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr26:35122477-35121757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 706
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr26:8872611-8873340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 98
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr26:12585771-12585043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 30
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr26:13807261-13806534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 408
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr26:14488488-14487766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 91
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr26:23889177-23889902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 72
               

               
Conread position:
               
339-1036
               

               
Cow position:
               
chr26:4729558-4728829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
339-1037
               

               
Cow position:
               
chr26:30586581-30585861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 465
               

               
Conread position:
               
339-1048
               

               
Cow position:
               
chr26:27987829-27987091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 212
               

               
Conread position:
               
340-554
               

               
Cow position:
               
chr26:46783-46569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
154, 198
               

               
Conread position:
               
343-623
               

               
Cow position:
               
chr26:31143478-31143196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 135
               

               
Conread position:
               
348-758
               

               
Cow position:
               
chr26:3705419-3705844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 139
               

               
Conread position:
               
350-1035
               

               
Cow position:
               
chr26:17429699-17428980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 681
               

               
Conread position:
               
356-1026
               

               
Cow position:
               
chr26:3230251-3230952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 129
               

               
Conread position:
               
362-1043
               

               
Cow position:
               
chr26:3754830-3755517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 60
               

               
Conread position:
               
364-642
               

               
Cow position:
               
chr26:19490003-19490284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
366-622
               

               
Cow position:
               
chr26:27940928-27941184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
366-990
               

               
Cow position:
               
chr26:17994202-17993548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 578
               

               
Conread position:
               
367-1041
               

               
Cow position:
               
chr26:11362890-11362191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 502
               

               
Conread position:
               
379-915
               

               
Cow position:
               
chr26:18934584-18934026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 140
               

               
Conread position:
               
379-1035
               

               
Cow position:
               
chr26:26285668-26286355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 72
               

               
Conread position:
               
383-622
               

               
Cow position:
               
chr26:25189554-25189792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
383-642
               

               
Cow position:
               
chr26:22619203-22619462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
384-959
               

               
Cow position:
               
chr26:35520591-35519979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
191, 48
               

               
Conread position:
               
396-593
               

               
Cow position:
               
chr26:8281082-8280894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
399-1020
               

               
Cow position:
               
chr26:4324865-4324241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 35
               

               
Conread position:
               
403-1035
               

               
Cow position:
               
chr26:10699662-10699017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 107
               

               
Conread position:
               
404-1027
               

               
Cow position:
               
chr26:1620484-1621134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 49
               

               
Conread position:
               
406-1020
               

               
Cow position:
               
chr26:20496367-20497010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
407-988
               

               
Cow position:
               
chr26:35335379-35334764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 339
               

               
Conread position:
               
411-642
               

               
Cow position:
               
chr26:35559666-35559442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
221, 90
               

               
Conread position:
               
418-990
               

               
Cow position:
               
chr26:34034533-34035134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 37
               

               
Conread position:
               
428-1026
               

               
Cow position:
               
chr26:13183165-13183796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 354
               

               
Conread position:
               
443-1026
               

               
Cow position:
               
chr26:35191675-35191062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 10
               

               
Conread position:
               
455-625
               

               
Cow position:
               
chr26:2389673-2389838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
455-733
               

               
Cow position:
               
chr26:6425912-6426211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
458-1023
               

               
Cow position:
               
chr26:34014718-34015320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 541
               

               
Conread position:
               
459-770
               

               
Cow position:
               
chr26:26312748-26313071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
461-645
               

               
Cow position:
               
chr26:19564451-19564265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
461-1035
               

               
Cow position:
               
chr26:31139047-31138455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 9
               

               
Conread position:
               
472-1026
               

               
Cow position:
               
chr26:799632-799058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 368
               

               
Conread position:
               
475-1026
               

               
Cow position:
               
chr26:30594728-30594143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
485-834
               

               
Cow position:
               
chr26:12258869-12258498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 89
               

               
Conread position:
               
494-673
               

               
Cow position:
               
chr26:3565158-3564974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
507-1036
               

               
Cow position:
               
chr26:386634-387176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 20
               

               
Conread position:
               
518-1026
               

               
Cow position:
               
chr26:4440809-4440280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 178
               

               
Conread position:
               
525-961
               

               
Cow position:
               
chr26:22660326-22659870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 309
               

               
Conread position:
               
528-642
               

               
Cow position:
               
chr26:615686-615572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
530-792
               

               
Cow position:
               
chr26:6031126-6030872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
138, 102
               

               
Conread position:
               
532-915
               

               
Cow position:
               
chr26:2244536-2244141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 204
               

               
Conread position:
               
532-1020
               

               
Cow position:
               
chr26:14173037-14173543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 266
               

               
Conread position:
               
532-1020
               

               
Cow position:
               
chr26:15891936-15892454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 432
               

               
Conread position:
               
532-1042
               

               
Cow position:
               
chr26:21350467-21351003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 38
               

               
Conread position:
               
541-1026
               

               
Cow position:
               
chr26:10490215-10490725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
543-1026
               

               
Cow position:
               
chr26:1884977-1885496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
545-999
               

               
Cow position:
               
chr26:18801186-18800705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 63
               

               
Conread position:
               
549-778
               

               
Cow position:
               
chr26:18773289-18773042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
549-1039
               

               
Cow position:
               
chr26:16781157-16781674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 165
               

               
Conread position:
               
551-1026
               

               
Cow position:
               
chr26:3863097-3862593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
552-1035
               

               
Cow position:
               
chr26:8809858-8810349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 97
               

               
Conread position:
               
558-758
               

               
Cow position:
               
chr26:3199564-3199346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
559-725
               

               
Cow position:
               
chr26:20186294-20186469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
569-1026
               

               
Cow position:
               
chr26:35561066-35560577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 470
               

               
Conread position:
               
573-1026
               

               
Cow position:
               
chr26:8083825-8084312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
573-1026
               

               
Cow position:
               
chr26:22691389-22691872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 402
               

               
Conread position:
               
575-912
               

               
Cow position:
               
chr26:7506712-7506351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
575-1042
               

               
Cow position:
               
chr26:11269232-11269724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
588-1026
               

               
Cow position:
               
chr26:9100964-9100508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 197
               

               
Conread position:
               
597-853
               

               
Cow position:
               
chr26:7381563-7381844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 226
               

               
Conread position:
               
598-1026
               

               
Cow position:
               
chr26:1343269-1342809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
639-924
               

               
Cow position:
               
chr26:1614195-1614495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
35, 138
               

               
Conread position:
               
639-961
               

               
Cow position:
               
chr26:10011195-10011542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
660-1042
               

               
Cow position:
               
chr26:3924369-3923982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 101
               

               
Conread position:
               
661-1020
               

               
Cow position:
               
chr26:46552-46170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 314
               

               
Conread position:
               
661-1027
               

               
Cow position:
               
chr26:26238101-26238486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 184
               

               
Conread position:
               
669-960
               

               
Cow position:
               
chr26:14290915-14291211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 228
               

               
Conread position:
               
672-899
               

               
Cow position:
               
chr26:11262853-11263084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 154
               

               
Conread position:
               
672-906
               

               
Cow position:
               
chr26:2221891-2221650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
672-1020
               

               
Cow position:
               
chr26:22621337-22621689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
82, 65
               

               
Conread position:
               
672-1023
               

               
Cow position:
               
chr26:25392907-25393270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
672-1026
               

               
Cow position:
               
chr26:3833144-3833520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
672-1035
               

               
Cow position:
               
chr26:17182200-17182556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
678-1026
               

               
Cow position:
               
chr26:8739301-8738931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
678-1035
               

               
Cow position:
               
chr26:1915458-1915834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 154
               

               
Conread position:
               
678-1035
               

               
Cow position:
               
chr26:9694680-9694302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 341
               

               
Conread position:
               
681-990
               

               
Cow position:
               
chr26:19795172-19795503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 185
               

               
Conread position:
               
684-1038
               

               
Cow position:
               
chr26:3186882-3187254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 332
               

               
Conread position:
               
688-1026
               

               
Cow position:
               
chr26:7559490-7559130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
708-1026
               

               
Cow position:
               
chr26:20255784-20256109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
713-1014
               

               
Cow position:
               
chr26:3157272-3157589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
713-1014
               

               
Cow position:
               
chr26:6038525-6038220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
76, 84
               

               
Conread position:
               
713-1023
               

               
Cow position:
               
chr26:3564883-3564556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
713-1026
               

               
Cow position:
               
chr26:15145651-15145980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
713-1035
               

               
Cow position:
               
chr26:6844063-6843725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
713-1035
               

               
Cow position:
               
chr26:15199185-15199522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 186
               

               
Conread position:
               
714-885
               

               
Cow position:
               
chr26:2965373-2965197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
714-981
               

               
Cow position:
               
chr26:20186480-20186752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 224
               

               
Conread position:
               
714-1027
               

               
Cow position:
               
chr26:12126392-12126085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
716-1041
               

               
Cow position:
               
chr26:21858760-21859086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
720-1027
               

               
Cow position:
               
chr26:21823425-21823118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 156
               

               
Conread position:
               
723-1037
               

               
Cow position:
               
chr26:3556931-3556621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 45
               

               
Conread position:
               
726-905
               

               
Cow position:
               
chr26:3689662-3689845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
728-915
               

               
Cow position:
               
chr26:1637585-1637395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 155
               

               
Conread position:
               
728-1026
               

               
Cow position:
               
chr26:17287985-17288299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
733-1035
               

               
Cow position:
               
chr26:13773230-13773546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
734-990
               

               
Cow position:
               
chr26:9063266-9063534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 64
               

               
Conread position:
               
739-1026
               

               
Cow position:
               
chr26:9069744-9070048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
42, 123
               

               
Conread position:
               
739-1042
               

               
Cow position:
               
chr26:12662548-12662240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
740-1023
               

               
Cow position:
               
chr26:6429770-6430066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
742-1004
               

               
Cow position:
               
chr26:3199557-3199835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
743-994
               

               
Cow position:
               
chr26:34030748-34031008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
746-1027
               

               
Cow position:
               
chr26:18928472-18928760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
35, 136
               

               
Conread position:
               
750-909
               

               
Cow position:
               
chr26:756416-756254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
750-1035
               

               
Cow position:
               
chr26:23590889-23591190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
30, 110
               

               
Conread position:
               
752-1020
               

               
Cow position:
               
chr26:799877-800158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
752-1029
               

               
Cow position:
               
chr26:24238902-24239188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
753-1026
               

               
Cow position:
               
chr26:20218458-20218729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
756-1037
               

               
Cow position:
               
chr26:22831836-22831542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
761-1035
               

               
Cow position:
               
chr26:2740405-2740111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
774-1023
               

               
Cow position:
               
chr26:26611680-26611939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
774-1026
               

               
Cow position:
               
chr26:20019325-20019587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
778-1014
               

               
Cow position:
               
chr26:18877035-18877280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
135, 52
               

               
Conread position:
               
778-1026
               

               
Cow position:
               
chr26:7459736-7459476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
778-1026
               

               
Cow position:
               
chr26:9835696-9835957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
778-1035
               

               
Cow position:
               
chr26:11369925-11370188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
779-1027
               

               
Cow position:
               
chr26:19536294-19536544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
127, 82
               

               
Conread position:
               
783-1026
               

               
Cow position:
               
chr26:6030745-6030505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
215, 81
               

               
Conread position:
               
789-1027
               

               
Cow position:
               
chr26:19792149-19791909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
114, 79
               

               
Conread position:
               
789-1035
               

               
Cow position:
               
chr26:29433471-29433727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
805-1035
               

               
Cow position:
               
chr26:30786184-30786422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
112, 19
               

               
Conread position:
               
806-1026
               

               
Cow position:
               
chr26:3027183-3026954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
808-1035
               

               
Cow position:
               
chr26:30725660-30725422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
810-1026
               

               
Cow position:
               
chr26:17169090-17169316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
819-1035
               

               
Cow position:
               
chr26:2670548-2670325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
98, 72
               

               
Conread position:
               
834-1026
               

               
Cow position:
               
chr26:30753055-30752853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
835-1014
               

               
Cow position:
               
chr26:7677019-7677208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
835-1035
               

               
Cow position:
               
chr26:6476392-6476182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
837-1026
               

               
Cow position:
               
chr26:11297116-11296918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
76, 188
               

               
Conread position:
               
864-1026
               

               
Cow position:
               
chr26:11537139-11537311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
873-1031
               

               
Cow position:
               
chr26:16864597-16864765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
894-1016
               

               
Cow position:
               
chr26:23600676-23600554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 59
               
Show alignments to all cow chromosomes.