Cow genome map

Conread name: Ss1.1-LyN1-MLN01C080083.5

Conread position: 271-1020
Cow position: chr28:21379195-21379974 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 16

Conread position: 321-1027
Cow position: chr28:4457082-4457818 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 61

Conread position: 331-639
Cow position: chr28:34408759-34408451 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 218

Conread position: 331-990
Cow position: chr28:7021855-7021175 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 87

Conread position: 331-992
Cow position: chr28:3004761-3004065 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 93

Conread position: 332-445
Cow position: chr28:24670350-24670463 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 332-526
Cow position: chr28:25702152-25701959 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 105

Conread position: 332-566
Cow position: chr28:21105344-21105110 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 79, 106

Conread position: 332-642
Cow position: chr28:23024942-23025244 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 300, 170

Conread position: 332-1011
Cow position: chr28:28470782-28471495 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 550

Conread position: 332-1023
Cow position: chr28:1507635-1508363 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 511

Conread position: 332-1026
Cow position: chr28:7907785-7907059 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 159

Conread position: 332-1026
Cow position: chr28:23674582-23675300 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 118

Conread position: 332-1035
Cow position: chr28:6958992-6959725 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 150

Conread position: 332-1035
Cow position: chr28:10294559-10295295 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 239

Conread position: 332-1035
Cow position: chr28:20935654-20934916 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 0

Conread position: 336-1023
Cow position: chr28:5940249-5940970 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 0

Conread position: 336-1024
Cow position: chr28:6472674-6471956 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 586

Conread position: 337-466
Cow position: chr28:29759888-29759759 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 337-598
Cow position: chr28:6812551-6812294 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 59, 27

Conread position: 337-606
Cow position: chr28:34083781-34083513 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 147

Conread position: 337-620
Cow position: chr28:2122435-2122714 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 207, 0

Conread position: 337-623
Cow position: chr28:15575822-15576110 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 60, 68

Conread position: 337-630
Cow position: chr28:8787857-8788142 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 128, 64

Conread position: 337-641
Cow position: chr28:25040677-25040382 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 195, 66

Conread position: 337-644
Cow position: chr28:30920448-30920149 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 292, 88

Conread position: 337-673
Cow position: chr28:25563172-25563515 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 0

Conread position: 337-692
Cow position: chr28:15938422-15938057 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 303

Conread position: 337-777
Cow position: chr28:7654854-7654402 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 101

Conread position: 337-783
Cow position: chr28:25595667-25596131 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 0

Conread position: 337-817
Cow position: chr28:25026641-25027141 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 187

Conread position: 337-895
Cow position: chr28:10458330-10457737 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 125

Conread position: 337-906
Cow position: chr28:15004029-15004620 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 373
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 295, 99

Conread position: 337-985
Cow position: chr28:14492105-14492758 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 34

Conread position: 337-990
Cow position: chr28:3645211-3645885 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 119

Conread position: 337-990
Cow position: chr28:15352353-15351673 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 312

Conread position: 337-990
Cow position: chr28:28441513-28442182 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 20

Conread position: 337-1002
Cow position: chr28:25827340-25826656 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 45

Conread position: 337-1011
Cow position: chr28:32786657-32785958 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 74

Conread position: 337-1012
Cow position: chr28:3744741-3745429 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 17

Conread position: 337-1014
Cow position: chr28:24498814-24499525 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 279

Conread position: 337-1020
Cow position: chr28:17371814-17371164 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 433
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 181, 32

Conread position: 337-1023
Cow position: chr28:10576238-10575537 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 56

Conread position: 337-1023
Cow position: chr28:10643724-10643059 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 176

Conread position: 337-1023
Cow position: chr28:14511211-14511916 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 101

Conread position: 337-1023
Cow position: chr28:15428434-15429149 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 9

Conread position: 337-1026
Cow position: chr28:1025565-1024846 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 121

Conread position: 337-1026
Cow position: chr28:6474482-6473769 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 99

Conread position: 337-1027
Cow position: chr28:6230922-6230208 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 63

Conread position: 337-1027
Cow position: chr28:11544718-11544022 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 87

Conread position: 337-1027
Cow position: chr28:24621077-24620376 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 158

Conread position: 337-1035
Cow position: chr28:30960319-30961034 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 19

Conread position: 337-1037
Cow position: chr28:26923867-26923131 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 102

Conread position: 337-1047
Cow position: chr28:21568670-21569408 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 176

Conread position: 338-592
Cow position: chr28:21323854-21324098 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 98, 0

Conread position: 338-604
Cow position: chr28:33991988-33992251 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 108

Conread position: 338-622
Cow position: chr28:12227802-12227529 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 98, 0

Conread position: 338-627
Cow position: chr28:13724646-13724926 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 152, 60

Conread position: 338-964
Cow position: chr28:4929685-4929025 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 0

Conread position: 338-997
Cow position: chr28:10325836-10326513 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 62

Conread position: 338-998
Cow position: chr28:957645-958314 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 143

Conread position: 339-449
Cow position: chr28:16597114-16597224 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 339-490
Cow position: chr28:10579098-10578944 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 54

Conread position: 339-507
Cow position: chr28:7743908-7744075 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 132, 0

Conread position: 339-561
Cow position: chr28:14891719-14891940 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 339-570
Cow position: chr28:14110837-14111068 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 339-593
Cow position: chr28:24488902-24489148 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 339-595
Cow position: chr28:8381813-8382069 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 339-623
Cow position: chr28:5771995-5772273 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 339-631
Cow position: chr28:22040642-22040352 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 0

Conread position: 339-672
Cow position: chr28:12407447-12407110 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 91

Conread position: 339-707
Cow position: chr28:5337093-5336712 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 112

Conread position: 339-714
Cow position: chr28:12936645-12936257 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 339-741
Cow position: chr28:24591640-24592058 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 109

Conread position: 339-762
Cow position: chr28:1165119-1164684 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 132

Conread position: 339-763
Cow position: chr28:5569137-5569572 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 127

Conread position: 339-777
Cow position: chr28:3189265-3188810 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 294

Conread position: 339-783
Cow position: chr28:31849159-31848706 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 156

Conread position: 339-820
Cow position: chr28:5791743-5791240 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 92

Conread position: 339-827
Cow position: chr28:1215064-1214552 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-828
Cow position: chr28:15033312-15032799 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-838
Cow position: chr28:13880289-13880808 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 232

Conread position: 339-842
Cow position: chr28:7829273-7829799 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 112

Conread position: 339-842
Cow position: chr28:34582690-34583217 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 0

Conread position: 339-877
Cow position: chr28:12154609-12155168 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 18

Conread position: 339-889
Cow position: chr28:1196880-1197468 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 183

Conread position: 339-898
Cow position: chr28:2088339-2088922 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 552

Conread position: 339-911
Cow position: chr28:30534295-30533697 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 518

Conread position: 339-915
Cow position: chr28:12217523-12216923 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-915
Cow position: chr28:15604377-15604983 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-915
Cow position: chr28:28928602-28929198 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 439

Conread position: 339-1002
Cow position: chr28:9443502-9442829 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 27

Conread position: 339-1013
Cow position: chr28:2644481-2645187 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 576

Conread position: 339-1014
Cow position: chr28:482942-482234 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-1023
Cow position: chr28:1956135-1956847 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 246

Conread position: 339-1023
Cow position: chr28:5636817-5637534 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-1023
Cow position: chr28:5816418-5817105 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 114

Conread position: 339-1023
Cow position: chr28:8718206-8717469 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 184

Conread position: 339-1026
Cow position: chr28:444173-444895 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 339-1026
Cow position: chr28:1812193-1811497 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 316

Conread position: 339-1026
Cow position: chr28:5824601-5825336 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 642

Conread position: 339-1026
Cow position: chr28:6477986-6478705 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 184

Conread position: 339-1026
Cow position: chr28:6536030-6535311 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 183

Conread position: 339-1026
Cow position: chr28:9181636-9182356 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 203

Conread position: 339-1026
Cow position: chr28:10771856-10772563 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 74

Conread position: 339-1026
Cow position: chr28:12649996-12650705 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 451

Conread position: 339-1026
Cow position: chr28:16181141-16181855 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 36

Conread position: 339-1026
Cow position: chr28:17391181-17391920 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 0

Conread position: 339-1026
Cow position: chr28:21896061-21896768 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 198

Conread position: 339-1027
Cow position: chr28:11502464-11501734 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 457

Conread position: 339-1027
Cow position: chr28:15917757-15917039 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 25

Conread position: 339-1027
Cow position: chr28:28358017-28357296 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 0

Conread position: 339-1035
Cow position: chr28:785432-786157 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 339-1035
Cow position: chr28:4958735-4958011 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 17

Conread position: 339-1035
Cow position: chr28:5111952-5111228 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 91

Conread position: 339-1035
Cow position: chr28:5210888-5211617 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-1035
Cow position: chr28:5748940-5748210 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 294

Conread position: 339-1035
Cow position: chr28:6777238-6776507 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 541

Conread position: 339-1035
Cow position: chr28:7004793-7005524 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 94

Conread position: 339-1035
Cow position: chr28:7335755-7336479 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 156

Conread position: 339-1035
Cow position: chr28:7813446-7814139 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 150

Conread position: 339-1035
Cow position: chr28:10302606-10303333 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 210

Conread position: 339-1035
Cow position: chr28:13462730-13463459 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 230

Conread position: 339-1035
Cow position: chr28:17664200-17663453 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 74

Conread position: 339-1035
Cow position: chr28:18517378-18516649 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 137

Conread position: 339-1035
Cow position: chr28:20967903-20967173 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 339-1035
Cow position: chr28:22255432-22254706 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 528

Conread position: 339-1035
Cow position: chr28:24885627-24886356 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 112

Conread position: 339-1035
Cow position: chr28:26420234-26419505 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 182

Conread position: 339-1035
Cow position: chr28:29036878-29036156 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 64

Conread position: 339-1035
Cow position: chr28:29822954-29823681 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 141

Conread position: 339-1035
Cow position: chr28:30097644-30098372 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 483

Conread position: 339-1035
Cow position: chr28:33255088-33255816 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 136

Conread position: 339-1035
Cow position: chr28:33639336-33640064 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 502

Conread position: 339-1035
Cow position: chr28:34597013-34597741 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 97

Conread position: 339-1037
Cow position: chr28:25069599-25070345 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 235

Conread position: 339-1040
Cow position: chr28:34678427-34677708 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 243

Conread position: 340-552
Cow position: chr28:5767666-5767879 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 120, 0

Conread position: 340-783
Cow position: chr28:12700414-12700871 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 295
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 112

Conread position: 340-1027
Cow position: chr28:24302572-24301877 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 87

Conread position: 340-1041
Cow position: chr28:29436019-29435304 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 241

Conread position: 341-915
Cow position: chr28:5571404-5572009 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 57

Conread position: 343-1035
Cow position: chr28:21362278-21363004 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 362

Conread position: 343-1036
Cow position: chr28:23794790-23794083 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 93

Conread position: 347-1048
Cow position: chr28:4044995-4045711 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 17

Conread position: 348-611
Cow position: chr28:15686187-15686447 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 89

Conread position: 355-783
Cow position: chr28:20034904-20035317 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 295
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 32, 47

Conread position: 356-568
Cow position: chr28:34879632-34879848 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 187

Conread position: 356-911
Cow position: chr28:22230546-22229970 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 175

Conread position: 356-1023
Cow position: chr28:14665931-14666629 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 26

Conread position: 357-526
Cow position: chr28:25334095-25333926 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 360-759
Cow position: chr28:25761684-25762088 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 152

Conread position: 361-995
Cow position: chr28:32731211-32730580 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 58

Conread position: 364-528
Cow position: chr28:3461294-3461458 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 364-990
Cow position: chr28:3067682-3068336 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 103

Conread position: 365-1023
Cow position: chr28:17600190-17599501 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 47

Conread position: 367-895
Cow position: chr28:30305215-30304665 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 71

Conread position: 367-1023
Cow position: chr28:10480082-10479416 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 62

Conread position: 367-1027
Cow position: chr28:30966008-30966689 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 140

Conread position: 373-1023
Cow position: chr28:13606247-13606914 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 29

Conread position: 379-673
Cow position: chr28:1384658-1384370 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 45

Conread position: 383-1023
Cow position: chr28:10279664-10280324 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 226

Conread position: 385-673
Cow position: chr28:12170768-12170477 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 177, 48

Conread position: 388-990
Cow position: chr28:16041838-16041229 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 132

Conread position: 396-783
Cow position: chr28:12952032-12952423 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 252
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 239, 286

Conread position: 398-1027
Cow position: chr28:15600912-15600269 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 13

Conread position: 400-731
Cow position: chr28:34606426-34606761 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 229
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 228, 47

Conread position: 406-624
Cow position: chr28:7233947-7234157 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 406-1035
Cow position: chr28:4213726-4214386 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 228

Conread position: 410-964
Cow position: chr28:7443632-7443044 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 0

Conread position: 410-989
Cow position: chr28:32267005-32267577 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 377
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 25, 38

Conread position: 413-1026
Cow position: chr28:34730574-34731218 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 109

Conread position: 415-1014
Cow position: chr28:12997527-12998152 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 79

Conread position: 415-1026
Cow position: chr28:23310493-23309849 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 131

Conread position: 422-1023
Cow position: chr28:17603175-17602557 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 91

Conread position: 426-622
Cow position: chr28:3012943-3012757 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 31, 27

Conread position: 428-702
Cow position: chr28:7547591-7547876 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 207, 78

Conread position: 429-1026
Cow position: chr28:25849417-25850048 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 430-1026
Cow position: chr28:3626871-3627500 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 173

Conread position: 431-950
Cow position: chr28:23619826-23620364 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 11

Conread position: 433-1023
Cow position: chr28:28935103-28934479 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 436-698
Cow position: chr28:22498172-22498436 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 21, 15

Conread position: 444-762
Cow position: chr28:5867356-5867682 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 166, 51

Conread position: 446-911
Cow position: chr28:28184258-28184754 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 0

Conread position: 455-778
Cow position: chr28:3652129-3652462 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 143

Conread position: 455-1020
Cow position: chr28:6046679-6047276 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 116

Conread position: 456-713
Cow position: chr28:13373914-13373652 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 173

Conread position: 456-864
Cow position: chr28:2663074-2662646 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 291
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 175, 26

Conread position: 457-881
Cow position: chr28:24670678-24671129 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 253

Conread position: 458-989
Cow position: chr28:4376503-4375966 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 267

Conread position: 458-1025
Cow position: chr28:26563078-26563651 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 374
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 182, 72

Conread position: 463-669
Cow position: chr28:25796638-25796422 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 50

Conread position: 463-900
Cow position: chr28:12047646-12047189 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 285

Conread position: 464-673
Cow position: chr28:1836634-1836848 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 167, 0

Conread position: 465-1026
Cow position: chr28:5311866-5312461 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 0

Conread position: 477-1026
Cow position: chr28:15054064-15054643 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 477-1035
Cow position: chr28:17368993-17369549 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 317

Conread position: 516-1012
Cow position: chr28:601230-600710 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 54

Conread position: 520-820
Cow position: chr28:980317-979993 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 113, 193

Conread position: 520-1037
Cow position: chr28:19834054-19834596 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 114

Conread position: 521-1026
Cow position: chr28:7059178-7059717 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 522-990
Cow position: chr28:22200915-22201402 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 324
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 116, 75

Conread position: 527-1045
Cow position: chr28:14149949-14150494 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 533-990
Cow position: chr28:14229993-14229534 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 316
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 102, 34

Conread position: 537-672
Cow position: chr28:21767782-21767642 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 537-1026
Cow position: chr28:22580012-22580505 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 318
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 86, 50

Conread position: 537-1035
Cow position: chr28:21768329-21767808 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 330

Conread position: 540-1026
Cow position: chr28:25701965-25701461 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 43

Conread position: 541-1004
Cow position: chr28:13522655-13523148 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 62

Conread position: 545-1035
Cow position: chr28:7744075-7744594 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 550-758
Cow position: chr28:34880112-34880340 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 79, 163

Conread position: 553-1002
Cow position: chr28:1777545-1778022 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 305
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 6

Conread position: 556-1023
Cow position: chr28:9288410-9287909 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 561-1023
Cow position: chr28:17031102-17030614 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 142

Conread position: 569-1026
Cow position: chr28:10194609-10194118 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 570-1026
Cow position: chr28:13323130-13323620 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 574-1037
Cow position: chr28:21104969-21104481 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 23

Conread position: 593-1027
Cow position: chr28:10162258-10162712 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 100

Conread position: 603-1012
Cow position: chr28:25408660-25409103 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 398

Conread position: 616-1023
Cow position: chr28:18140653-18140230 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 274
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 85

Conread position: 644-1014
Cow position: chr28:5116986-5117373 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 235
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 326

Conread position: 652-822
Cow position: chr28:6319879-6320067 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 652-1023
Cow position: chr28:5770107-5770503 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 273
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 25, 241

Conread position: 653-1023
Cow position: chr28:7685851-7685458 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 183

Conread position: 653-1023
Cow position: chr28:30870165-30870558 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 34

Conread position: 655-890
Cow position: chr28:30329046-30328805 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 165

Conread position: 668-956
Cow position: chr28:6506554-6506863 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 101

Conread position: 668-989
Cow position: chr28:4816886-4817217 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 7

Conread position: 671-1026
Cow position: chr28:29473109-29473478 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 243
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 101

Conread position: 671-1047
Cow position: chr28:15687411-15687799 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 160

Conread position: 672-915
Cow position: chr28:331789-331534 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 232

Conread position: 672-1020
Cow position: chr28:1384344-1383972 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 672-1020
Cow position: chr28:5772533-5772889 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 71

Conread position: 672-1026
Cow position: chr28:34083159-34082783 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 672-1035
Cow position: chr28:16597261-16597643 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 184

Conread position: 674-990
Cow position: chr28:32301474-32301136 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 164

Conread position: 675-960
Cow position: chr28:23839134-23839411 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 155

Conread position: 675-975
Cow position: chr28:23025488-23025808 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 41, 0

Conread position: 675-1035
Cow position: chr28:5804383-5804762 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 677-1026
Cow position: chr28:24992603-24992974 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 677-1035
Cow position: chr28:7785106-7784727 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 68

Conread position: 678-950
Cow position: chr28:8971194-8971485 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 210

Conread position: 679-1026
Cow position: chr28:1198313-1198682 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 679-1035
Cow position: chr28:10473085-10473454 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 165

Conread position: 688-1020
Cow position: chr28:3001729-3001378 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 0

Conread position: 688-1026
Cow position: chr28:2280774-2280435 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 32, 237

Conread position: 698-1026
Cow position: chr28:15266244-15265895 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 126

Conread position: 710-1037
Cow position: chr28:13373382-13373049 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 68, 19

Conread position: 713-970
Cow position: chr28:33688756-33689012 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 156
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 68, 33

Conread position: 713-1038
Cow position: chr28:23615301-23615643 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 714-961
Cow position: chr28:34200875-34200622 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 121, 58

Conread position: 714-988
Cow position: chr28:15935719-15935441 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 168

Conread position: 714-1026
Cow position: chr28:8786471-8786803 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 66, 275

Conread position: 714-1026
Cow position: chr28:12936115-12935787 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 714-1035
Cow position: chr28:1944136-1943800 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 116

Conread position: 714-1037
Cow position: chr28:28723387-28723721 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 715-1035
Cow position: chr28:29807279-29806945 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 124

Conread position: 716-1002
Cow position: chr28:24488224-24487924 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 70, 181

Conread position: 719-1023
Cow position: chr28:14233929-14234231 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 197, 64

Conread position: 722-901
Cow position: chr28:1836960-1837140 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 89

Conread position: 727-956
Cow position: chr28:12169815-12170052 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 155, 97

Conread position: 732-1026
Cow position: chr28:6061104-6060814 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 48, 61

Conread position: 739-1026
Cow position: chr28:32588883-32589186 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 740-1026
Cow position: chr28:25828580-25828882 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 741-1026
Cow position: chr28:29223099-29222798 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 741-1035
Cow position: chr28:2223180-2222868 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 752-1035
Cow position: chr28:12429405-12429700 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 28, 130

Conread position: 754-1035
Cow position: chr28:5768155-5768446 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 97

Conread position: 772-1035
Cow position: chr28:3188793-3188521 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 141, 98

Conread position: 774-1045
Cow position: chr28:17209739-17209475 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 128, 7

Conread position: 778-915
Cow position: chr28:28340085-28340221 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 778-976
Cow position: chr28:19300285-19300487 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 135, 61

Conread position: 778-1014
Cow position: chr28:34879211-34878975 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 133, 40

Conread position: 778-1033
Cow position: chr28:5336576-5336311 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 77, 87

Conread position: 778-1035
Cow position: chr28:10578869-10578600 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 121, 230

Conread position: 778-1035
Cow position: chr28:15715201-15715467 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 134, 108

Conread position: 778-1035
Cow position: chr28:23868467-23868734 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 133, 0

Conread position: 778-1036
Cow position: chr28:24997683-24997411 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 132, 13

Conread position: 778-1043
Cow position: chr28:3652840-3653108 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 29

Conread position: 779-1035
Cow position: chr28:23543856-23544119 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 133, 51

Conread position: 780-1026
Cow position: chr28:31322425-31322671 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 133, 201

Conread position: 781-1026
Cow position: chr28:10870322-10870576 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 136, 0

Conread position: 792-1026
Cow position: chr28:12406919-12406677 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 159

Conread position: 797-1023
Cow position: chr28:25762082-25762300 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 48

Conread position: 798-1000
Cow position: chr28:15676884-15677096 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 798-1027
Cow position: chr28:23800515-23800750 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 33

Conread position: 799-1020
Cow position: chr28:16212079-16211854 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 821-1036
Cow position: chr28:7981687-7981466 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 96, 134

Conread position: 824-1026
Cow position: chr28:6319872-6319664 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 87, 116

Conread position: 826-1026
Cow position: chr28:12701144-12701354 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 827-1026
Cow position: chr28:9710876-9710667 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 830-1026
Cow position: chr28:24588965-24588759 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 833-1035
Cow position: chr28:1214497-1214285 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 149

Conread position: 839-1026
Cow position: chr28:7829847-7830045 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 847-1026
Cow position: chr28:30031640-30031829 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 862-1026
Cow position: chr28:30249439-30249613 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 876-1026
Cow position: chr28:4069281-4069439 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 81

Conread position: 878-1035
Cow position: chr28:13864889-13865047 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 913-1035
Cow position: chr28:29198851-29198973 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 916-1043
Cow position: chr28:24644837-24644965 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 123, 0

Show alignments to all cow chromosomes.