• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-LyN1-MLN01C080083.5
        

               
Conread position:
               
220-1010
               

               
Cow position:
               
chr5:10841044-10840203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 284
               

               
Conread position:
               
232-1035
               

               
Cow position:
               
chr5:10921290-10922131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
847
               

               
Alignm identity:
               
598
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
269-1023
               

               
Cow position:
               
chr5:28015517-28016330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
275-990
               

               
Cow position:
               
chr5:14782700-14781990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 16
               

               
Conread position:
               
300-950
               

               
Cow position:
               
chr5:25901943-25901273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 21
               

               
Conread position:
               
310-986
               

               
Cow position:
               
chr5:13531367-13530694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
22, 111
               

               
Conread position:
               
315-1000
               

               
Cow position:
               
chr5:46686072-46685376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 9
               

               
Conread position:
               
320-1027
               

               
Cow position:
               
chr5:28332065-28331351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
116, 12
               

               
Conread position:
               
321-1013
               

               
Cow position:
               
chr5:29673783-29674472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
330-998
               

               
Cow position:
               
chr5:4349449-4348750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 557
               

               
Conread position:
               
331-760
               

               
Cow position:
               
chr5:58462297-58462725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 98
               

               
Conread position:
               
331-784
               

               
Cow position:
               
chr5:60446377-60445917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
332-622
               

               
Cow position:
               
chr5:3200899-3201191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
332-622
               

               
Cow position:
               
chr5:25022426-25022721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 93
               

               
Conread position:
               
332-669
               

               
Cow position:
               
chr5:14877581-14877240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 301
               

               
Conread position:
               
332-724
               

               
Cow position:
               
chr5:58150055-58149668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
26, 132
               

               
Conread position:
               
332-730
               

               
Cow position:
               
chr5:28948193-28947779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 268
               

               
Conread position:
               
332-736
               

               
Cow position:
               
chr5:43989642-43990030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
300, 64
               

               
Conread position:
               
332-795
               

               
Cow position:
               
chr5:57336864-57336383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 0
               

               
Conread position:
               
332-854
               

               
Cow position:
               
chr5:7276383-7276927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 412
               

               
Conread position:
               
332-854
               

               
Cow position:
               
chr5:45180543-45179992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
332-990
               

               
Cow position:
               
chr5:25929140-25928457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 129
               

               
Conread position:
               
332-1035
               

               
Cow position:
               
chr5:12920948-12921683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 300
               

               
Conread position:
               
332-1035
               

               
Cow position:
               
chr5:48025827-48026554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 81
               

               
Conread position:
               
332-1038
               

               
Cow position:
               
chr5:7395808-7396532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 110
               

               
Conread position:
               
336-623
               

               
Cow position:
               
chr5:34472619-34472335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 8
               

               
Conread position:
               
336-900
               

               
Cow position:
               
chr5:23957773-23957185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 0
               

               
Conread position:
               
337-493
               

               
Cow position:
               
chr5:57832603-57832445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
337-523
               

               
Cow position:
               
chr5:1229334-1229516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
337-537
               

               
Cow position:
               
chr5:32365321-32365517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
337-539
               

               
Cow position:
               
chr5:16910532-16910330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
127, 97
               

               
Conread position:
               
337-539
               

               
Cow position:
               
chr5:21786140-21785940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
337-544
               

               
Cow position:
               
chr5:23846421-23846214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
152, 116
               

               
Conread position:
               
337-546
               

               
Cow position:
               
chr5:7809903-7809697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
182, 146
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr5:15723930-15723700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 68
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr5:38737352-38737575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
337-601
               

               
Cow position:
               
chr5:26100267-26100532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 24
               

               
Conread position:
               
337-618
               

               
Cow position:
               
chr5:57928817-57928536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 111
               

               
Conread position:
               
337-623
               

               
Cow position:
               
chr5:29826923-29827208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 99
               

               
Conread position:
               
337-623
               

               
Cow position:
               
chr5:57124065-57124342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
337-623
               

               
Cow position:
               
chr5:58550534-58550823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
337-642
               

               
Cow position:
               
chr5:34218993-34218703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
135, 63
               

               
Conread position:
               
337-642
               

               
Cow position:
               
chr5:40347726-40347420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 0
               

               
Conread position:
               
337-642
               

               
Cow position:
               
chr5:58000242-58000542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 225
               

               
Conread position:
               
337-672
               

               
Cow position:
               
chr5:15361718-15362059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
337-708
               

               
Cow position:
               
chr5:38285850-38286222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
287, 99
               

               
Conread position:
               
337-712
               

               
Cow position:
               
chr5:54695247-54694862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 297
               

               
Conread position:
               
337-714
               

               
Cow position:
               
chr5:28026013-28026398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 78
               

               
Conread position:
               
337-714
               

               
Cow position:
               
chr5:42043454-42043836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
144, 39
               

               
Conread position:
               
337-716
               

               
Cow position:
               
chr5:57614622-57614246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
295, 82
               

               
Conread position:
               
337-726
               

               
Cow position:
               
chr5:48409911-48409504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
337-732
               

               
Cow position:
               
chr5:70127344-70127734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
337-752
               

               
Cow position:
               
chr5:31750909-31751329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 220
               

               
Conread position:
               
337-760
               

               
Cow position:
               
chr5:12680035-12679588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 280
               

               
Conread position:
               
337-770
               

               
Cow position:
               
chr5:73457728-73458167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 33
               

               
Conread position:
               
337-783
               

               
Cow position:
               
chr5:3628253-3627797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 117
               

               
Conread position:
               
337-783
               

               
Cow position:
               
chr5:25232588-25232131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 177
               

               
Conread position:
               
337-784
               

               
Cow position:
               
chr5:59278698-59279158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 146
               

               
Conread position:
               
337-806
               

               
Cow position:
               
chr5:30844384-30844873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 15
               

               
Conread position:
               
337-811
               

               
Cow position:
               
chr5:61232251-61231761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
54, 154
               

               
Conread position:
               
337-820
               

               
Cow position:
               
chr5:30360895-30360393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 124
               

               
Conread position:
               
337-857
               

               
Cow position:
               
chr5:27655306-27655839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 30
               

               
Conread position:
               
337-915
               

               
Cow position:
               
chr5:50604777-50604198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 116
               

               
Conread position:
               
337-915
               

               
Cow position:
               
chr5:70531854-70531311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 19
               

               
Conread position:
               
337-919
               

               
Cow position:
               
chr5:23233060-23233642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 58
               

               
Conread position:
               
337-949
               

               
Cow position:
               
chr5:3252582-3251959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 97
               

               
Conread position:
               
337-953
               

               
Cow position:
               
chr5:11956930-11956294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
90, 78
               

               
Conread position:
               
337-955
               

               
Cow position:
               
chr5:6189457-6190094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 60
               

               
Conread position:
               
337-960
               

               
Cow position:
               
chr5:12502616-12501962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 29
               

               
Conread position:
               
337-960
               

               
Cow position:
               
chr5:47697640-47696993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
337-966
               

               
Cow position:
               
chr5:48534416-48535065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 19
               

               
Conread position:
               
337-989
               

               
Cow position:
               
chr5:40791400-40792073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 78
               

               
Conread position:
               
337-989
               

               
Cow position:
               
chr5:58013252-58012563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 64
               

               
Conread position:
               
337-990
               

               
Cow position:
               
chr5:55833293-55832597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
74, 94
               

               
Conread position:
               
337-990
               

               
Cow position:
               
chr5:67653886-67654565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 104
               

               
Conread position:
               
337-999
               

               
Cow position:
               
chr5:29768631-29769310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 51
               

               
Conread position:
               
337-1016
               

               
Cow position:
               
chr5:9091864-9091159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 502
               

               
Conread position:
               
337-1020
               

               
Cow position:
               
chr5:34299426-34300151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 19
               

               
Conread position:
               
337-1020
               

               
Cow position:
               
chr5:54622178-54622885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 142
               

               
Conread position:
               
337-1022
               

               
Cow position:
               
chr5:22554688-22555388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
283, 221
               

               
Conread position:
               
337-1023
               

               
Cow position:
               
chr5:32965508-32964786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 243
               

               
Conread position:
               
337-1023
               

               
Cow position:
               
chr5:59770603-59771321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 27
               

               
Conread position:
               
337-1026
               

               
Cow position:
               
chr5:49755771-49755035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
337-1026
               

               
Cow position:
               
chr5:54721213-54721929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 126
               

               
Conread position:
               
337-1026
               

               
Cow position:
               
chr5:68337939-68337242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 140
               

               
Conread position:
               
337-1027
               

               
Cow position:
               
chr5:18884027-18883332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 81
               

               
Conread position:
               
337-1027
               

               
Cow position:
               
chr5:26057686-26058398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
337-1027
               

               
Cow position:
               
chr5:49131761-49132469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 31
               

               
Conread position:
               
337-1027
               

               
Cow position:
               
chr5:57364224-57363520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
285, 142
               

               
Conread position:
               
337-1035
               

               
Cow position:
               
chr5:64845703-64844982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 99
               

               
Conread position:
               
337-1041
               

               
Cow position:
               
chr5:24644315-24643582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 292
               

               
Conread position:
               
338-494
               

               
Cow position:
               
chr5:23667594-23667432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
338-526
               

               
Cow position:
               
chr5:70401461-70401648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
338-572
               

               
Cow position:
               
chr5:54858493-54858272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
176, 68
               

               
Conread position:
               
338-673
               

               
Cow position:
               
chr5:39448876-39448539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 116
               

               
Conread position:
               
338-766
               

               
Cow position:
               
chr5:24219696-24220145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 174
               

               
Conread position:
               
338-1023
               

               
Cow position:
               
chr5:31916204-31916885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 62
               

               
Conread position:
               
338-1027
               

               
Cow position:
               
chr5:32165359-32164658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 145
               

               
Conread position:
               
339-448
               

               
Cow position:
               
chr5:6840692-6840582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
339-450
               

               
Cow position:
               
chr5:40759281-40759171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
339-471
               

               
Cow position:
               
chr5:71621743-71621611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-472
               

               
Cow position:
               
chr5:56786106-56786239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-478
               

               
Cow position:
               
chr5:43381886-43382025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-492
               

               
Cow position:
               
chr5:58141686-58141533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-498
               

               
Cow position:
               
chr5:73486366-73486207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-579
               

               
Cow position:
               
chr5:27005654-27005888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
339-592
               

               
Cow position:
               
chr5:32775369-32775622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 107
               

               
Conread position:
               
339-595
               

               
Cow position:
               
chr5:47342270-47342526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-598
               

               
Cow position:
               
chr5:26512101-26511842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-614
               

               
Cow position:
               
chr5:74036074-74036349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-630
               

               
Cow position:
               
chr5:27549903-27549612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 269
               

               
Conread position:
               
339-639
               

               
Cow position:
               
chr5:10773547-10773248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 210
               

               
Conread position:
               
339-642
               

               
Cow position:
               
chr5:35207214-35206916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 63
               

               
Conread position:
               
339-642
               

               
Cow position:
               
chr5:59083668-59083369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 132
               

               
Conread position:
               
339-644
               

               
Cow position:
               
chr5:10513717-10513411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
339-644
               

               
Cow position:
               
chr5:13808117-13807816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
339-644
               

               
Cow position:
               
chr5:50688369-50688675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 0
               

               
Conread position:
               
339-645
               

               
Cow position:
               
chr5:2706334-2706023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
339-669
               

               
Cow position:
               
chr5:31284652-31284978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 0
               

               
Conread position:
               
339-673
               

               
Cow position:
               
chr5:11153902-11153564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
339-704
               

               
Cow position:
               
chr5:445077-445450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 22
               

               
Conread position:
               
339-705
               

               
Cow position:
               
chr5:37084317-37083939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 294
               

               
Conread position:
               
339-707
               

               
Cow position:
               
chr5:46003093-46002712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
339-708
               

               
Cow position:
               
chr5:21522179-21521795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
339-714
               

               
Cow position:
               
chr5:8177665-8178051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 264
               

               
Conread position:
               
339-731
               

               
Cow position:
               
chr5:18704215-18704621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
339-734
               

               
Cow position:
               
chr5:18119922-18119509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
339-737
               

               
Cow position:
               
chr5:4755170-4754756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 33
               

               
Conread position:
               
339-745
               

               
Cow position:
               
chr5:413147-412730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 85
               

               
Conread position:
               
339-757
               

               
Cow position:
               
chr5:27196523-27196096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 402
               

               
Conread position:
               
339-767
               

               
Cow position:
               
chr5:41980032-41980466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 49
               

               
Conread position:
               
339-771
               

               
Cow position:
               
chr5:32953883-32954333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 0
               

               
Conread position:
               
339-817
               

               
Cow position:
               
chr5:26076643-26076143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 79
               

               
Conread position:
               
339-818
               

               
Cow position:
               
chr5:42507316-42507817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 234
               

               
Conread position:
               
339-821
               

               
Cow position:
               
chr5:34525964-34526460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 140
               

               
Conread position:
               
339-889
               

               
Cow position:
               
chr5:6615736-6615163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
339-899
               

               
Cow position:
               
chr5:56932261-56931706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 245
               

               
Conread position:
               
339-914
               

               
Cow position:
               
chr5:39245727-39245143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
339-915
               

               
Cow position:
               
chr5:12729581-12729004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 263
               

               
Conread position:
               
339-915
               

               
Cow position:
               
chr5:26625271-26624674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 118
               

               
Conread position:
               
339-915
               

               
Cow position:
               
chr5:30156915-30157516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
339-915
               

               
Cow position:
               
chr5:38661888-38662488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
339-915
               

               
Cow position:
               
chr5:72346560-72345942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 261
               

               
Conread position:
               
339-949
               

               
Cow position:
               
chr5:37610385-37609752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 234
               

               
Conread position:
               
339-956
               

               
Cow position:
               
chr5:1641235-1640602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 414
               

               
Conread position:
               
339-990
               

               
Cow position:
               
chr5:18558846-18558168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 526
               

               
Conread position:
               
339-996
               

               
Cow position:
               
chr5:34701906-34702561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
339-1000
               

               
Cow position:
               
chr5:41391288-41391982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 114
               

               
Conread position:
               
339-1012
               

               
Cow position:
               
chr5:8997471-8996748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 234
               

               
Conread position:
               
339-1014
               

               
Cow position:
               
chr5:52823650-52822943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 648
               

               
Conread position:
               
339-1019
               

               
Cow position:
               
chr5:7141544-7140830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 62
               

               
Conread position:
               
339-1019
               

               
Cow position:
               
chr5:23353302-23354010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 113
               

               
Conread position:
               
339-1020
               

               
Cow position:
               
chr5:32755887-32755180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 244
               

               
Conread position:
               
339-1020
               

               
Cow position:
               
chr5:34191480-34192191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 25
               

               
Conread position:
               
339-1023
               

               
Cow position:
               
chr5:4016325-4015598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 371
               

               
Conread position:
               
339-1023
               

               
Cow position:
               
chr5:11632429-11631711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
339-1023
               

               
Cow position:
               
chr5:30581893-30582600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 143
               

               
Conread position:
               
339-1023
               

               
Cow position:
               
chr5:37734930-37735649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 542
               

               
Conread position:
               
339-1023
               

               
Cow position:
               
chr5:46671163-46671877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 255
               

               
Conread position:
               
339-1023
               

               
Cow position:
               
chr5:49221936-49221225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
339-1023
               

               
Cow position:
               
chr5:54928363-54927648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 701
               

               
Conread position:
               
339-1023
               

               
Cow position:
               
chr5:54930691-54929976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 701
               

               
Conread position:
               
339-1023
               

               
Cow position:
               
chr5:64779447-64778727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 37
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:4434948-4434227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:5105781-5106500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 107
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:6585904-6585177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 583
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:6772124-6772842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 502
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:9003554-9002833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 445
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:12133159-12133870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 43
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:19979359-19978637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 266
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:23829613-23828920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 294
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:37379640-37380363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 537
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:46666630-46667351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:46779074-46779791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 30
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:47470937-47471673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 242
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:48805893-48805192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 17
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:51166750-51166033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 112
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:52830239-52829509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 529
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:54786550-54785831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 95
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:58198567-58199286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 112
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:58771313-58770595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 504
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:59064001-59064720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 112
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:59145931-59146654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 155
               

               
Conread position:
               
339-1026
               

               
Cow position:
               
chr5:72856430-72857152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
339-1027
               

               
Cow position:
               
chr5:10066994-10066272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
339-1027
               

               
Cow position:
               
chr5:46735723-46734999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 549
               

               
Conread position:
               
339-1027
               

               
Cow position:
               
chr5:51745779-51746496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 0
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:443754-443023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 560
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:1339367-1338635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 423
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:2917022-2917747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 103
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:2976342-2977071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 630
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:3501571-3500842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 234
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:3788784-3789509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 609
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:3970079-3970808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
540
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 543
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:4387741-4388467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 138
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:4963819-4963100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 15
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:5716497-5715803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 387
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:5925404-5924691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 403
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:6152271-6151546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 82
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:10543111-10542390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 15
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:14543745-14543015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 361
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:14637022-14636293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 0
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:18249615-18250333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 670
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:24101207-24101936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 160
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:24298570-24299299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 218
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:29633985-29634715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 0
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:29743000-29742275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 249
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:41066581-41067296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 464
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:44709823-44709086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 260
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:46626709-46625991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 74
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:49117794-49117065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 113
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:49521276-49521989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 36
               

               
Conread position:
               
339-1035
               

               
Cow position:
               
chr5:58191477-58192201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 80
               

               
Conread position:
               
339-1041
               

               
Cow position:
               
chr5:47561000-47560269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 132
               

               
Conread position:
               
340-575
               

               
Cow position:
               
chr5:4353162-4353394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
340-623
               

               
Cow position:
               
chr5:34146370-34146093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
95, 56
               

               
Conread position:
               
340-630
               

               
Cow position:
               
chr5:64010297-64010014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
340-736
               

               
Cow position:
               
chr5:10097495-10097105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
331, 155
               

               
Conread position:
               
340-856
               

               
Cow position:
               
chr5:57920483-57921015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 190
               

               
Conread position:
               
340-912
               

               
Cow position:
               
chr5:42745332-42745919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 182
               

               
Conread position:
               
340-913
               

               
Cow position:
               
chr5:31098696-31098093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 102
               

               
Conread position:
               
340-981
               

               
Cow position:
               
chr5:41468157-41468804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 35
               

               
Conread position:
               
340-1026
               

               
Cow position:
               
chr5:63312956-63312247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 16
               

               
Conread position:
               
341-1026
               

               
Cow position:
               
chr5:27178206-27178912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 467
               

               
Conread position:
               
341-1045
               

               
Cow position:
               
chr5:48226015-48225284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 289
               

               
Conread position:
               
343-915
               

               
Cow position:
               
chr5:31120646-31120051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 585
               

               
Conread position:
               
344-598
               

               
Cow position:
               
chr5:31920294-31920540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
346-592
               

               
Cow position:
               
chr5:28235196-28234953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 124
               

               
Conread position:
               
347-576
               

               
Cow position:
               
chr5:31134432-31134203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
348-576
               

               
Cow position:
               
chr5:27490529-27490753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
348-628
               

               
Cow position:
               
chr5:51817909-51818184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
348-1035
               

               
Cow position:
               
chr5:10854262-10853548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 225
               

               
Conread position:
               
349-854
               

               
Cow position:
               
chr5:54361865-54362393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 102
               

               
Conread position:
               
350-623
               

               
Cow position:
               
chr5:1643338-1643612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 148
               

               
Conread position:
               
350-736
               

               
Cow position:
               
chr5:73220620-73220217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 110
               

               
Conread position:
               
351-633
               

               
Cow position:
               
chr5:41332978-41333270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
353-478
               

               
Cow position:
               
chr5:41524988-41524862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
355-1037
               

               
Cow position:
               
chr5:41952501-41951778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 140
               

               
Conread position:
               
356-535
               

               
Cow position:
               
chr5:28861593-28861416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
356-577
               

               
Cow position:
               
chr5:41357287-41357065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
356-752
               

               
Cow position:
               
chr5:28222654-28222253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
356-990
               

               
Cow position:
               
chr5:73443976-73444641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 237
               

               
Conread position:
               
356-1024
               

               
Cow position:
               
chr5:27690571-27691255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 57
               

               
Conread position:
               
357-546
               

               
Cow position:
               
chr5:41927129-41926940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
357-747
               

               
Cow position:
               
chr5:5859533-5859948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 0
               

               
Conread position:
               
360-990
               

               
Cow position:
               
chr5:52606044-52605383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 136
               

               
Conread position:
               
360-1026
               

               
Cow position:
               
chr5:60570-59873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 258
               

               
Conread position:
               
361-615
               

               
Cow position:
               
chr5:40933015-40933258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
126, 189
               

               
Conread position:
               
361-755
               

               
Cow position:
               
chr5:10813786-10814197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 0
               

               
Conread position:
               
361-781
               

               
Cow position:
               
chr5:15316312-15316744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 22
               

               
Conread position:
               
364-540
               

               
Cow position:
               
chr5:18570707-18570531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
151, 111
               

               
Conread position:
               
364-605
               

               
Cow position:
               
chr5:55914486-55914732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
364-630
               

               
Cow position:
               
chr5:54783967-54784235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
364-1011
               

               
Cow position:
               
chr5:27481848-27482498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
366-610
               

               
Cow position:
               
chr5:49911328-49911567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
369-723
               

               
Cow position:
               
chr5:23684793-23684430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
260, 17
               

               
Conread position:
               
369-1026
               

               
Cow position:
               
chr5:42282757-42283440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 180
               

               
Conread position:
               
371-766
               

               
Cow position:
               
chr5:32089201-32088793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
372-1026
               

               
Cow position:
               
chr5:6456074-6455386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 0
               

               
Conread position:
               
375-577
               

               
Cow position:
               
chr5:46649675-46649879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
375-929
               

               
Cow position:
               
chr5:66909697-66910276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 5
               

               
Conread position:
               
377-1023
               

               
Cow position:
               
chr5:18900930-18901593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 76
               

               
Conread position:
               
379-872
               

               
Cow position:
               
chr5:3440933-3441431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
379-1023
               

               
Cow position:
               
chr5:49489600-49490250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 74
               

               
Conread position:
               
380-1038
               

               
Cow position:
               
chr5:62435723-62436409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 638
               

               
Conread position:
               
381-752
               

               
Cow position:
               
chr5:58244197-58243809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 202
               

               
Conread position:
               
381-1035
               

               
Cow position:
               
chr5:17646474-17645796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 114
               

               
Conread position:
               
381-1035
               

               
Cow position:
               
chr5:69519214-69519886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 47
               

               
Conread position:
               
385-1020
               

               
Cow position:
               
chr5:9235798-9235141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 135
               

               
Conread position:
               
385-1023
               

               
Cow position:
               
chr5:30293921-30294577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 344
               

               
Conread position:
               
388-983
               

               
Cow position:
               
chr5:55683478-55684099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
247, 36
               

               
Conread position:
               
389-1020
               

               
Cow position:
               
chr5:62376999-62377636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 91
               

               
Conread position:
               
390-787
               

               
Cow position:
               
chr5:45838526-45838104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
400-606
               

               
Cow position:
               
chr5:55630392-55630598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
171, 24
               

               
Conread position:
               
404-626
               

               
Cow position:
               
chr5:9425664-9425885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
404-783
               

               
Cow position:
               
chr5:44482226-44482622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
404-956
               

               
Cow position:
               
chr5:57984219-57983648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 32
               

               
Conread position:
               
404-997
               

               
Cow position:
               
chr5:10299089-10299716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 0
               

               
Conread position:
               
405-838
               

               
Cow position:
               
chr5:16126668-16127123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 183
               

               
Conread position:
               
414-1023
               

               
Cow position:
               
chr5:5936935-5937579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 22
               

               
Conread position:
               
415-964
               

               
Cow position:
               
chr5:37625493-37626074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 0
               

               
Conread position:
               
415-1005
               

               
Cow position:
               
chr5:47360851-47361458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 98
               

               
Conread position:
               
420-912
               

               
Cow position:
               
chr5:34905361-34905839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
215, 16
               

               
Conread position:
               
421-1009
               

               
Cow position:
               
chr5:56961200-56961817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 151
               

               
Conread position:
               
421-1026
               

               
Cow position:
               
chr5:23754703-23754079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 57
               

               
Conread position:
               
424-645
               

               
Cow position:
               
chr5:50899126-50899348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
424-990
               

               
Cow position:
               
chr5:41229402-41228808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 158
               

               
Conread position:
               
424-1026
               

               
Cow position:
               
chr5:50202365-50201725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 574
               

               
Conread position:
               
424-1035
               

               
Cow position:
               
chr5:26466285-26466910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 193
               

               
Conread position:
               
428-783
               

               
Cow position:
               
chr5:16960772-16960404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
204, 175
               

               
Conread position:
               
436-896
               

               
Cow position:
               
chr5:14631594-14631127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
197, 19
               

               
Conread position:
               
438-783
               

               
Cow position:
               
chr5:6840566-6840203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
444-624
               

               
Cow position:
               
chr5:61040837-61041011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
445-1022
               

               
Cow position:
               
chr5:13701734-13702324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
187, 102
               

               
Conread position:
               
455-736
               

               
Cow position:
               
chr5:46796358-46796660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
455-812
               

               
Cow position:
               
chr5:26120115-26120482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
185, 40
               

               
Conread position:
               
455-1035
               

               
Cow position:
               
chr5:54124764-54125357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 403
               

               
Conread position:
               
459-669
               

               
Cow position:
               
chr5:29432910-29432701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
187, 16
               

               
Conread position:
               
463-1035
               

               
Cow position:
               
chr5:21188902-21189504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 89
               

               
Conread position:
               
464-1035
               

               
Cow position:
               
chr5:48575133-48574541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 358
               

               
Conread position:
               
465-1026
               

               
Cow position:
               
chr5:710469-709875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 573
               

               
Conread position:
               
471-642
               

               
Cow position:
               
chr5:41293501-41293665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
162, 23
               

               
Conread position:
               
471-747
               

               
Cow position:
               
chr5:41524583-41524302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
160, 59
               

               
Conread position:
               
471-1035
               

               
Cow position:
               
chr5:58003926-58004515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 59
               

               
Conread position:
               
473-825
               

               
Cow position:
               
chr5:38379077-38378716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
160, 22
               

               
Conread position:
               
473-1026
               

               
Cow position:
               
chr5:18666997-18667584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 154
               

               
Conread position:
               
473-1035
               

               
Cow position:
               
chr5:18119285-18118689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
475-1004
               

               
Cow position:
               
chr5:294957-295520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 411
               

               
Conread position:
               
476-712
               

               
Cow position:
               
chr5:47755661-47755910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
476-859
               

               
Cow position:
               
chr5:37424419-37424827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 269
               

               
Conread position:
               
476-1027
               

               
Cow position:
               
chr5:53076174-53075592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 36
               

               
Conread position:
               
478-644
               

               
Cow position:
               
chr5:1382565-1382732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
482-896
               

               
Cow position:
               
chr5:50675888-50675450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
482-1042
               

               
Cow position:
               
chr5:24633339-24632748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 21
               

               
Conread position:
               
486-1026
               

               
Cow position:
               
chr5:62160214-62159650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 39
               

               
Conread position:
               
489-783
               

               
Cow position:
               
chr5:49970545-49970857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
492-1023
               

               
Cow position:
               
chr5:42675996-42676517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 30
               

               
Conread position:
               
492-1026
               

               
Cow position:
               
chr5:6031694-6032251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 88
               

               
Conread position:
               
494-973
               

               
Cow position:
               
chr5:2203680-2203167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
494-1014
               

               
Cow position:
               
chr5:46817388-46816838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 17
               

               
Conread position:
               
496-725
               

               
Cow position:
               
chr5:45702772-45703014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
496-803
               

               
Cow position:
               
chr5:70348120-70348443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
497-1035
               

               
Cow position:
               
chr5:51684920-51684331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 516
               

               
Conread position:
               
499-777
               

               
Cow position:
               
chr5:14655443-14655144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
499-1014
               

               
Cow position:
               
chr5:15761653-15761105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 272
               

               
Conread position:
               
500-733
               

               
Cow position:
               
chr5:15676633-15676885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
503-1035
               

               
Cow position:
               
chr5:31634141-31634722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 393
               

               
Conread position:
               
504-915
               

               
Cow position:
               
chr5:6986764-6986331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 375
               

               
Conread position:
               
505-1027
               

               
Cow position:
               
chr5:49565300-49565842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 255
               

               
Conread position:
               
514-770
               

               
Cow position:
               
chr5:63200029-63200302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
514-1035
               

               
Cow position:
               
chr5:73486166-73485600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 56
               

               
Conread position:
               
516-994
               

               
Cow position:
               
chr5:1229539-1230048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 140
               

               
Conread position:
               
516-1027
               

               
Cow position:
               
chr5:22857893-22857355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 49
               

               
Conread position:
               
518-915
               

               
Cow position:
               
chr5:11357861-11358282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
519-1038
               

               
Cow position:
               
chr5:13258338-13258875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
113, 242
               

               
Conread position:
               
519-1040
               

               
Cow position:
               
chr5:53834390-53834943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 523
               

               
Conread position:
               
523-624
               

               
Cow position:
               
chr5:32814551-32814654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
523-1023
               

               
Cow position:
               
chr5:29256471-29255941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 232
               

               
Conread position:
               
523-1035
               

               
Cow position:
               
chr5:34670343-34669803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 41
               

               
Conread position:
               
525-1026
               

               
Cow position:
               
chr5:31709040-31709577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
528-1043
               

               
Cow position:
               
chr5:35446871-35446335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 236
               

               
Conread position:
               
534-831
               

               
Cow position:
               
chr5:2699422-2699101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
534-990
               

               
Cow position:
               
chr5:8479042-8479518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
98, 342
               

               
Conread position:
               
534-1035
               

               
Cow position:
               
chr5:6125411-6124877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 515
               

               
Conread position:
               
542-1038
               

               
Cow position:
               
chr5:33776008-33775498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 211
               

               
Conread position:
               
545-985
               

               
Cow position:
               
chr5:70401647-70402115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
545-1034
               

               
Cow position:
               
chr5:29458685-29459177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 195
               

               
Conread position:
               
546-1013
               

               
Cow position:
               
chr5:14905288-14904815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 252
               

               
Conread position:
               
550-1027
               

               
Cow position:
               
chr5:4629555-4630038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
552-1048
               

               
Cow position:
               
chr5:27173492-27174010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 37
               

               
Conread position:
               
553-901
               

               
Cow position:
               
chr5:39935859-39936207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
84, 54
               

               
Conread position:
               
553-1037
               

               
Cow position:
               
chr5:56442047-56442545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 92
               

               
Conread position:
               
553-1054
               

               
Cow position:
               
chr5:6735858-6735339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
555-982
               

               
Cow position:
               
chr5:38848813-38848352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
555-1026
               

               
Cow position:
               
chr5:54136866-54136361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
565-1027
               

               
Cow position:
               
chr5:41954503-41954028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
68, 133
               

               
Conread position:
               
566-1026
               

               
Cow position:
               
chr5:64958989-64958505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 183
               

               
Conread position:
               
567-1019
               

               
Cow position:
               
chr5:71737898-71738381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
60, 290
               

               
Conread position:
               
569-1035
               

               
Cow position:
               
chr5:46676399-46676899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
573-1016
               

               
Cow position:
               
chr5:46649898-46650364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 124
               

               
Conread position:
               
573-1026
               

               
Cow position:
               
chr5:17026868-17027342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 213
               

               
Conread position:
               
573-1026
               

               
Cow position:
               
chr5:25912523-25912995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 221
               

               
Conread position:
               
574-938
               

               
Cow position:
               
chr5:65597221-65597614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 269
               

               
Conread position:
               
575-994
               

               
Cow position:
               
chr5:41357044-41356598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
58, 258
               

               
Conread position:
               
579-1035
               

               
Cow position:
               
chr5:3544104-3544582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 360
               

               
Conread position:
               
585-946
               

               
Cow position:
               
chr5:62759335-62758944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
47, 162
               

               
Conread position:
               
585-949
               

               
Cow position:
               
chr5:28571350-28571745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
61, 271
               

               
Conread position:
               
585-1023
               

               
Cow position:
               
chr5:31920890-31921332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 94
               

               
Conread position:
               
586-983
               

               
Cow position:
               
chr5:46470939-46470517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
49, 40
               

               
Conread position:
               
586-1026
               

               
Cow position:
               
chr5:1059764-1059290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
587-990
               

               
Cow position:
               
chr5:5682707-5682268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
587-1013
               

               
Cow position:
               
chr5:23667378-23666931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
587-1026
               

               
Cow position:
               
chr5:24577240-24577713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
587-1048
               

               
Cow position:
               
chr5:26135469-26134969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 248
               

               
Conread position:
               
590-1026
               

               
Cow position:
               
chr5:20108220-20107753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 428
               

               
Conread position:
               
592-1026
               

               
Cow position:
               
chr5:6572430-6571974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
41, 252
               

               
Conread position:
               
595-1023
               

               
Cow position:
               
chr5:10262470-10262002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 5
               

               
Conread position:
               
596-1035
               

               
Cow position:
               
chr5:55630877-55631350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
608-915
               

               
Cow position:
               
chr5:13630669-13630338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
615-1020
               

               
Cow position:
               
chr5:18491238-18491679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
634-1036
               

               
Cow position:
               
chr5:71457189-71456761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 378
               

               
Conread position:
               
643-1023
               

               
Cow position:
               
chr5:47854700-47855101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 160
               

               
Conread position:
               
651-917
               

               
Cow position:
               
chr5:54867904-54868181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 250
               

               
Conread position:
               
652-908
               

               
Cow position:
               
chr5:39216363-39216088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
652-915
               

               
Cow position:
               
chr5:2695928-2695646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
652-1023
               

               
Cow position:
               
chr5:10772951-10772556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
652-1023
               

               
Cow position:
               
chr5:44617019-44617419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
652-1026
               

               
Cow position:
               
chr5:21827701-21828097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
652-1026
               

               
Cow position:
               
chr5:34683486-34683085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 330
               

               
Conread position:
               
652-1026
               

               
Cow position:
               
chr5:36370118-36369715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
652-1026
               

               
Cow position:
               
chr5:54952248-54951845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
652-1067
               

               
Cow position:
               
chr5:36907188-36906743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 441
               

               
Conread position:
               
657-994
               

               
Cow position:
               
chr5:24154191-24154542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
17, 107
               

               
Conread position:
               
661-1015
               

               
Cow position:
               
chr5:41488560-41488936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
661-1035
               

               
Cow position:
               
chr5:51501774-51502170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 195
               

               
Conread position:
               
663-1004
               

               
Cow position:
               
chr5:1382873-1383232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
668-1023
               

               
Cow position:
               
chr5:25920876-25920513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
668-1023
               

               
Cow position:
               
chr5:29661496-29661137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
672-915
               

               
Cow position:
               
chr5:23642311-23642062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 193
               

               
Conread position:
               
672-915
               

               
Cow position:
               
chr5:52646651-52646401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 193
               

               
Conread position:
               
672-1020
               

               
Cow position:
               
chr5:30301759-30302114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 90
               

               
Conread position:
               
672-1026
               

               
Cow position:
               
chr5:41548633-41548273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
30, 78
               

               
Conread position:
               
672-1026
               

               
Cow position:
               
chr5:47342775-47343150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 154
               

               
Conread position:
               
672-1026
               

               
Cow position:
               
chr5:47872205-47871831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 158
               

               
Conread position:
               
672-1027
               

               
Cow position:
               
chr5:41411537-41411161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 300
               

               
Conread position:
               
672-1035
               

               
Cow position:
               
chr5:15454678-15455050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
672-1036
               

               
Cow position:
               
chr5:29223358-29222978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
673-1050
               

               
Cow position:
               
chr5:27549588-27549214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
674-915
               

               
Cow position:
               
chr5:69770983-69771218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
674-1026
               

               
Cow position:
               
chr5:19970129-19969765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
675-1027
               

               
Cow position:
               
chr5:18405147-18404780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 173
               

               
Conread position:
               
677-963
               

               
Cow position:
               
chr5:59072138-59071829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
677-1037
               

               
Cow position:
               
chr5:29762831-29763195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
39, 153
               

               
Conread position:
               
686-1014
               

               
Cow position:
               
chr5:26073865-26073523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
688-915
               

               
Cow position:
               
chr5:14942899-14942660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
688-1026
               

               
Cow position:
               
chr5:24158852-24159212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
688-1041
               

               
Cow position:
               
chr5:21187851-21188225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 367
               

               
Conread position:
               
693-1020
               

               
Cow position:
               
chr5:50899565-50899904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
693-1037
               

               
Cow position:
               
chr5:7552707-7553053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
697-1026
               

               
Cow position:
               
chr5:23648499-23648153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
40, 190
               

               
Conread position:
               
700-1035
               

               
Cow position:
               
chr5:54088668-54088999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
179, 18
               

               
Conread position:
               
713-964
               

               
Cow position:
               
chr5:46588056-46587791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
68, 171
               

               
Conread position:
               
713-993
               

               
Cow position:
               
chr5:32811079-32810781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
713-1023
               

               
Cow position:
               
chr5:26096233-26096550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 88
               

               
Conread position:
               
713-1023
               

               
Cow position:
               
chr5:41548059-41547743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
67, 127
               

               
Conread position:
               
713-1026
               

               
Cow position:
               
chr5:6576644-6576315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
713-1026
               

               
Cow position:
               
chr5:45179898-45179570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 184
               

               
Conread position:
               
713-1027
               

               
Cow position:
               
chr5:23845594-23845274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 186
               

               
Conread position:
               
713-1034
               

               
Cow position:
               
chr5:46707594-46707922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 108
               

               
Conread position:
               
713-1035
               

               
Cow position:
               
chr5:8178087-8178420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
67, 97
               

               
Conread position:
               
713-1035
               

               
Cow position:
               
chr5:27907514-27907182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
713-1035
               

               
Cow position:
               
chr5:64061276-64061613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 184
               

               
Conread position:
               
714-994
               

               
Cow position:
               
chr5:34524288-34523995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
714-998
               

               
Cow position:
               
chr5:2704613-2704302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
714-1020
               

               
Cow position:
               
chr5:45704968-45705282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 69
               

               
Conread position:
               
714-1023
               

               
Cow position:
               
chr5:34677851-34678150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
62, 130
               

               
Conread position:
               
714-1026
               

               
Cow position:
               
chr5:31560194-31560530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
714-1035
               

               
Cow position:
               
chr5:68593382-68593706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
715-880
               

               
Cow position:
               
chr5:39750071-39749900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
715-984
               

               
Cow position:
               
chr5:51294012-51293726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 169
               

               
Conread position:
               
715-988
               

               
Cow position:
               
chr5:27613192-27613463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
715-1023
               

               
Cow position:
               
chr5:28947454-28947137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
65, 108
               

               
Conread position:
               
715-1026
               

               
Cow position:
               
chr5:43991233-43991559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
718-1035
               

               
Cow position:
               
chr5:34708722-34709055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
719-1026
               

               
Cow position:
               
chr5:75755539-75755849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
720-915
               

               
Cow position:
               
chr5:10479748-10479546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
723-1023
               

               
Cow position:
               
chr5:17387459-17387143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
723-1023
               

               
Cow position:
               
chr5:54397552-54397253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
188, 67
               

               
Conread position:
               
723-1023
               

               
Cow position:
               
chr5:58461739-58461419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
723-1026
               

               
Cow position:
               
chr5:72046705-72046387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
57, 233
               

               
Conread position:
               
723-1041
               

               
Cow position:
               
chr5:59083251-59082909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 299
               

               
Conread position:
               
727-1035
               

               
Cow position:
               
chr5:54336867-54337188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
728-956
               

               
Cow position:
               
chr5:38737992-38738236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
728-1026
               

               
Cow position:
               
chr5:4754170-4753856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
728-1035
               

               
Cow position:
               
chr5:15677024-15677345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 309
               

               
Conread position:
               
729-1026
               

               
Cow position:
               
chr5:12212497-12212810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
733-1037
               

               
Cow position:
               
chr5:18703457-18703144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
47, 117
               

               
Conread position:
               
736-1026
               

               
Cow position:
               
chr5:41524029-41523718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
738-1026
               

               
Cow position:
               
chr5:57336391-57336087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
739-983
               

               
Cow position:
               
chr5:46000196-45999944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
739-1023
               

               
Cow position:
               
chr5:76099056-76098756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
739-1026
               

               
Cow position:
               
chr5:26052705-26053008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
739-1038
               

               
Cow position:
               
chr5:57936148-57935820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
743-904
               

               
Cow position:
               
chr5:37608285-37608452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
743-1026
               

               
Cow position:
               
chr5:445457-445756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
743-1035
               

               
Cow position:
               
chr5:27196082-27195776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
744-1026
               

               
Cow position:
               
chr5:12337253-12337551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
745-916
               

               
Cow position:
               
chr5:742762-742590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
745-1013
               

               
Cow position:
               
chr5:40929038-40928762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
750-1035
               

               
Cow position:
               
chr5:55722514-55722815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
752-1027
               

               
Cow position:
               
chr5:24220985-24221273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
753-1026
               

               
Cow position:
               
chr5:41586262-41586551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
756-1035
               

               
Cow position:
               
chr5:42743784-42744076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 140
               

               
Conread position:
               
773-914
               

               
Cow position:
               
chr5:40891737-40891599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
775-908
               

               
Cow position:
               
chr5:58350618-58350751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
776-990
               

               
Cow position:
               
chr5:18126642-18126856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 42
               

               
Conread position:
               
778-926
               

               
Cow position:
               
chr5:1772055-1771913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
778-984
               

               
Cow position:
               
chr5:27903427-27903634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
778-989
               

               
Cow position:
               
chr5:21524072-21524293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
778-990
               

               
Cow position:
               
chr5:41603300-41603523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
778-1020
               

               
Cow position:
               
chr5:58245351-58245603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
778-1022
               

               
Cow position:
               
chr5:39362891-39363144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 247
               

               
Conread position:
               
778-1026
               

               
Cow position:
               
chr5:1395439-1395185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
778-1026
               

               
Cow position:
               
chr5:4683481-4683224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
133, 180
               

               
Conread position:
               
778-1026
               

               
Cow position:
               
chr5:16085790-16085533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
135, 57
               

               
Conread position:
               
778-1026
               

               
Cow position:
               
chr5:35207261-35207519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
778-1035
               

               
Cow position:
               
chr5:13807732-13807472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
135, 203
               

               
Conread position:
               
778-1035
               

               
Cow position:
               
chr5:14551582-14551315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
778-1035
               

               
Cow position:
               
chr5:24088033-24087764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
778-1035
               

               
Cow position:
               
chr5:29558616-29558879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
99, 77
               

               
Conread position:
               
778-1035
               

               
Cow position:
               
chr5:32088753-32088493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
113, 48
               

               
Conread position:
               
778-1035
               

               
Cow position:
               
chr5:44275620-44275881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
778-1037
               

               
Cow position:
               
chr5:28223459-28223727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
780-915
               

               
Cow position:
               
chr5:25927417-25927282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
781-1026
               

               
Cow position:
               
chr5:6694556-6694811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
781-1037
               

               
Cow position:
               
chr5:15723294-15723027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
781-1041
               

               
Cow position:
               
chr5:33536639-33536903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
129, 64
               

               
Conread position:
               
782-1025
               

               
Cow position:
               
chr5:34559172-34559421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
130, 57
               

               
Conread position:
               
782-1035
               

               
Cow position:
               
chr5:66337887-66338137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
783-1026
               

               
Cow position:
               
chr5:6044025-6044275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
784-1035
               

               
Cow position:
               
chr5:4165656-4165913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
75, 179
               

               
Conread position:
               
788-1035
               

               
Cow position:
               
chr5:72007853-72007607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
790-1023
               

               
Cow position:
               
chr5:16895115-16894877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
122, 225
               

               
Conread position:
               
792-1041
               

               
Cow position:
               
chr5:59782729-59782465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
794-1035
               

               
Cow position:
               
chr5:7175333-7175584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
795-1026
               

               
Cow position:
               
chr5:75755081-75754847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
796-1035
               

               
Cow position:
               
chr5:8529688-8529931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
121, 93
               

               
Conread position:
               
797-1035
               

               
Cow position:
               
chr5:34527615-34527852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
798-1035
               

               
Cow position:
               
chr5:60446472-60446718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
799-1041
               

               
Cow position:
               
chr5:1105832-1105586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
803-1026
               

               
Cow position:
               
chr5:58353262-58353482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
804-976
               

               
Cow position:
               
chr5:40357899-40357716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
805-1035
               

               
Cow position:
               
chr5:45941944-45941712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
806-1014
               

               
Cow position:
               
chr5:46796955-46797165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
806-1026
               

               
Cow position:
               
chr5:43437895-43437665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
107, 171
               

               
Conread position:
               
814-1026
               

               
Cow position:
               
chr5:28012912-28013134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
814-1027
               

               
Cow position:
               
chr5:55087908-55088132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
815-1023
               

               
Cow position:
               
chr5:7498929-7498711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
816-1027
               

               
Cow position:
               
chr5:16053712-16053909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
822-1035
               

               
Cow position:
               
chr5:35180192-35180415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
825-1035
               

               
Cow position:
               
chr5:280113-279894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
830-1021
               

               
Cow position:
               
chr5:50923773-50923573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
83, 187
               

               
Conread position:
               
830-1023
               

               
Cow position:
               
chr5:1344824-1344617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
32, 162
               

               
Conread position:
               
838-1023
               

               
Cow position:
               
chr5:2395229-2395034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
846-1035
               

               
Cow position:
               
chr5:43984171-43984370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
851-1026
               

               
Cow position:
               
chr5:6219036-6219221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
858-1027
               

               
Cow position:
               
chr5:39448441-39448269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
864-1035
               

               
Cow position:
               
chr5:14558353-14558172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
872-1026
               

               
Cow position:
               
chr5:39749329-39749165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 134
               

               
Conread position:
               
872-1037
               

               
Cow position:
               
chr5:37384422-37384247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
875-1026
               

               
Cow position:
               
chr5:1780456-1780305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 132
               

               
Conread position:
               
878-1027
               

               
Cow position:
               
chr5:39816181-39816026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
878-1035
               

               
Cow position:
               
chr5:40828260-40828094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
878-1035
               

               
Cow position:
               
chr5:66256757-66256918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
886-1026
               

               
Cow position:
               
chr5:10479509-10479369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
894-1041
               

               
Cow position:
               
chr5:40346954-40346811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
902-1035
               

               
Cow position:
               
chr5:47600921-47601053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
903-1035
               

               
Cow position:
               
chr5:54868370-54868502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
910-1043
               

               
Cow position:
               
chr5:31217253-31217388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
911-1023
               

               
Cow position:
               
chr5:14630768-14630656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.