Cow genome map

Conread name: Ss1.1-LyN1-MLN01C110032.5

Conread position: 196-656
Cow position:
Alignm length: 469
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 248

Conread position: 197-380
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 144

Conread position: 197-655
Cow position:
Alignm length: 477
Alignm identity: 318
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 250, 29

Conread position: 197-657
Cow position:
Alignm length: 469
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 113

Conread position: 197-660
Cow position:
Alignm length: 475
Alignm identity: 310
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 10, 114

Conread position: 197-660
Cow position:
Alignm length: 475
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 87

Conread position: 197-662
Cow position:
Alignm length: 476
Alignm identity: 321
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 174, 95

Conread position: 197-669
Cow position:
Alignm length: 481
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 17

Conread position: 197-687
Cow position:
Alignm length: 505
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 92

Conread position: 197-688
Cow position:
Alignm length: 503
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 118

Conread position: 200-333
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 200-654
Cow position:
Alignm length: 488
Alignm identity: 326
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 256, 122

Conread position: 200-660
Cow position:
Alignm length: 469
Alignm identity: 302
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 95, 84

Conread position: 205-333
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 205-596
Cow position:
Alignm length: 414
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 30

Conread position: 205-660
Cow position:
Alignm length: 478
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 148

Conread position: 205-660
Cow position:
Alignm length: 457
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 12

Conread position: 205-688
Cow position:
Alignm length: 507
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 105

Conread position: 207-633
Cow position:
Alignm length: 438
Alignm identity: 276
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 88, 77

Conread position: 207-637
Cow position:
Alignm length: 440
Alignm identity: 285
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 101, 33

Conread position: 207-660
Cow position:
Alignm length: 464
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-660
Cow position:
Alignm length: 455
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 7

Conread position: 207-660
Cow position:
Alignm length: 467
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 114

Conread position: 207-660
Cow position:
Alignm length: 466
Alignm identity: 304
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 29, 23

Conread position: 207-660
Cow position:
Alignm length: 467
Alignm identity: 312
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 109

Conread position: 207-660
Cow position:
Alignm length: 465
Alignm identity: 302
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 203, 123

Conread position: 207-660
Cow position:
Alignm length: 460
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 174

Conread position: 207-660
Cow position:
Alignm length: 468
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 65

Conread position: 207-660
Cow position:
Alignm length: 456
Alignm identity: 292
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 238, 114

Conread position: 207-660
Cow position:
Alignm length: 466
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 77

Conread position: 207-660
Cow position:
Alignm length: 464
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 93

Conread position: 207-660
Cow position:
Alignm length: 466
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 162

Conread position: 207-660
Cow position:
Alignm length: 459
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 183

Conread position: 207-660
Cow position:
Alignm length: 463
Alignm identity: 295
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 61

Conread position: 207-660
Cow position:
Alignm length: 468
Alignm identity: 287
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 166

Conread position: 207-676
Cow position:
Alignm length: 487
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-686
Cow position:
Alignm length: 491
Alignm identity: 314
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 93, 77

Conread position: 207-687
Cow position:
Alignm length: 497
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 63

Conread position: 207-687
Cow position:
Alignm length: 488
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 77

Conread position: 207-687
Cow position:
Alignm length: 498
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 77

Conread position: 207-687
Cow position:
Alignm length: 493
Alignm identity: 317
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 74, 82

Conread position: 207-687
Cow position:
Alignm length: 505
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 162

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 162

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 85

Conread position: 207-719
Cow position:
Alignm length: 524
Alignm identity: 332
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 222, 156

Conread position: 207-720
Cow position:
Alignm length: 522
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 150

Conread position: 211-654
Cow position:
Alignm length: 463
Alignm identity: 293
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 249, 99

Conread position: 211-687
Cow position:
Alignm length: 492
Alignm identity: 316
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 238, 158

Conread position: 212-454
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 127, 0

Conread position: 213-658
Cow position:
Alignm length: 459
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 169

Conread position: 221-649
Cow position:
Alignm length: 444
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 149

Conread position: 222-660
Cow position:
Alignm length: 449
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 62

Conread position: 222-660
Cow position:
Alignm length: 452
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 62

Conread position: 223-455
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 227-359
Cow position:
Alignm length: 134
Alignm identity: 109
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 232-660
Cow position:
Alignm length: 441
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 131

Conread position: 233-682
Cow position:
Alignm length: 464
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 70

Conread position: 235-660
Cow position:
Alignm length: 444
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 125

Conread position: 235-660
Cow position:
Alignm length: 431
Alignm identity: 264
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 166, 134

Conread position: 237-455
Cow position:
Alignm length: 228
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 71

Conread position: 249-660
Cow position:
Alignm length: 425
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 28

Conread position: 258-687
Cow position:
Alignm length: 438
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 105

Conread position: 259-688
Cow position:
Alignm length: 454
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 27

Conread position: 369-652
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 92

Conread position: 383-658
Cow position:
Alignm length: 297
Alignm identity: 221
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 76, 256

Conread position: 384-616
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 154, 73

Conread position: 391-660
Cow position:
Alignm length: 290
Alignm identity: 206
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 71, 0

Conread position: 397-654
Cow position:
Alignm length: 269
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 96

Conread position: 406-657
Cow position:
Alignm length: 266
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 89

Conread position: 434-660
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 450-687
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 456-679
Cow position:
Alignm length: 228
Alignm identity: 155
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 457-660
Cow position:
Alignm length: 207
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 116

Conread position: 459-658
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 31, 19

Conread position: 459-660
Cow position:
Alignm length: 202
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 459-660
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 85, 0

Conread position: 459-660
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 88

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 79, 57

Conread position: 459-660
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 85

Conread position: 459-660
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 74, 85

Conread position: 459-660
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 79, 153

Conread position: 459-660
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 459-660
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 84, 0

Conread position: 459-660
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 84, 0

Conread position: 459-660
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 125

Conread position: 459-660
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 94, 83

Conread position: 459-660
Cow position:
Alignm length: 204
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 47

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 83, 64

Conread position: 459-669
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 79, 39

Conread position: 459-677
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 119, 165

Conread position: 459-682
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 72, 210

Conread position: 459-682
Cow position:
Alignm length: 228
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 59

Conread position: 459-685
Cow position:
Alignm length: 231
Alignm identity: 157
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 85, 104

Conread position: 459-685
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 27, 0

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 459-687
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 219, 147

Conread position: 459-687
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 0

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 78, 0

Conread position: 459-687
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 24, 31

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 77, 36

Conread position: 459-687
Cow position:
Alignm length: 234
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 24

Conread position: 459-687
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 78, 0

Conread position: 459-687
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 78, 0

Conread position: 459-688
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 54

Conread position: 462-655
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 113

Conread position: 462-660
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 22

Conread position: 462-660
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 76, 165

Conread position: 462-660
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 81, 10

Conread position: 462-660
Cow position:
Alignm length: 199
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 462-688
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 17

Conread position: 462-688
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 216, 93

Conread position: 463-688
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 8

Conread position: 465-660
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 110

Conread position: 466-687
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 212, 101

Conread position: 473-660
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 474-688
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 71, 56

Conread position: 477-657
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 91

Conread position: 484-660
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 488-660
Cow position:
Alignm length: 179
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 489-660
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 35

Conread position: 498-688
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 499-656
Cow position:
Alignm length: 158
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 510-660
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 35, 60

Conread position: 527-687
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 52

Conread position: 535-687
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 143, 0

Conread position: 535-687
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 143, 0

Conread position: 535-688
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 147, 0

Conread position: 548-660
Cow position:
Alignm length: 113
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 548-687
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 130, 0

Conread position: 548-688
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 125, 0

Show alignments to all cow chromosomes.