Cow genome map

Conread name: Ss1.1-LyN1-MLN01C110032.5

Conread position: 194-663
Cow position:
Alignm length: 477
Alignm identity: 276
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 166, 90

Conread position: 195-660
Cow position:
Alignm length: 478
Alignm identity: 313
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 28

Conread position: 197-359
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 77, 46

Conread position: 197-385
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 142, 150

Conread position: 197-645
Cow position:
Alignm length: 461
Alignm identity: 288
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 129, 121

Conread position: 197-658
Cow position:
Alignm length: 467
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 172

Conread position: 197-660
Cow position:
Alignm length: 479
Alignm identity: 304
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 98, 150

Conread position: 197-660
Cow position:
Alignm length: 491
Alignm identity: 327
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 25

Conread position: 197-660
Cow position:
Alignm length: 476
Alignm identity: 312
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 98, 87

Conread position: 197-660
Cow position:
Alignm length: 476
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 87

Conread position: 197-661
Cow position:
Alignm length: 490
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 36

Conread position: 197-687
Cow position:
Alignm length: 503
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 71

Conread position: 197-688
Cow position:
Alignm length: 518
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 119

Conread position: 197-689
Cow position:
Alignm length: 506
Alignm identity: 321
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 213, 172

Conread position: 198-621
Cow position:
Alignm length: 431
Alignm identity: 267
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 7, 59

Conread position: 200-660
Cow position:
Alignm length: 481
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 11

Conread position: 200-690
Cow position:
Alignm length: 505
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 79

Conread position: 203-660
Cow position:
Alignm length: 467
Alignm identity: 311
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 12, 167

Conread position: 204-660
Cow position:
Alignm length: 470
Alignm identity: 292
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 150, 117

Conread position: 204-687
Cow position:
Alignm length: 498
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 144

Conread position: 205-460
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 62, 0

Conread position: 207-335
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 207-335
Cow position:
Alignm length: 129
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 207-370
Cow position:
Alignm length: 164
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 207-631
Cow position:
Alignm length: 435
Alignm identity: 282
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 203, 151

Conread position: 207-636
Cow position:
Alignm length: 442
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-658
Cow position:
Alignm length: 473
Alignm identity: 301
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 242, 36

Conread position: 207-660
Cow position:
Alignm length: 466
Alignm identity: 300
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 201, 162

Conread position: 207-660
Cow position:
Alignm length: 466
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 81

Conread position: 207-660
Cow position:
Alignm length: 467
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 65

Conread position: 207-660
Cow position:
Alignm length: 464
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 77

Conread position: 207-660
Cow position:
Alignm length: 464
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 156

Conread position: 207-660
Cow position:
Alignm length: 459
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 63

Conread position: 207-660
Cow position:
Alignm length: 468
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-660
Cow position:
Alignm length: 469
Alignm identity: 312
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 255, 78

Conread position: 207-676
Cow position:
Alignm length: 479
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 123

Conread position: 207-687
Cow position:
Alignm length: 493
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-687
Cow position:
Alignm length: 497
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 10

Conread position: 207-687
Cow position:
Alignm length: 489
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 156

Conread position: 207-687
Cow position:
Alignm length: 494
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-687
Cow position:
Alignm length: 493
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 77

Conread position: 207-687
Cow position:
Alignm length: 496
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 156

Conread position: 207-687
Cow position:
Alignm length: 505
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 77

Conread position: 207-687
Cow position:
Alignm length: 506
Alignm identity: 331
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 77, 163

Conread position: 207-687
Cow position:
Alignm length: 492
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 253

Conread position: 207-687
Cow position:
Alignm length: 497
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 174

Conread position: 207-687
Cow position:
Alignm length: 493
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 162

Conread position: 207-687
Cow position:
Alignm length: 494
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 174

Conread position: 207-687
Cow position:
Alignm length: 489
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 30

Conread position: 207-687
Cow position:
Alignm length: 493
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-688
Cow position:
Alignm length: 491
Alignm identity: 311
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 137, 44

Conread position: 207-690
Cow position:
Alignm length: 494
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 133

Conread position: 207-690
Cow position:
Alignm length: 496
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 209-660
Cow position:
Alignm length: 464
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 154

Conread position: 209-687
Cow position:
Alignm length: 490
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 154

Conread position: 210-455
Cow position:
Alignm length: 247
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 136, 41

Conread position: 210-660
Cow position:
Alignm length: 460
Alignm identity: 300
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 218, 62

Conread position: 210-687
Cow position:
Alignm length: 491
Alignm identity: 317
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 86, 74

Conread position: 210-690
Cow position:
Alignm length: 497
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 62

Conread position: 211-657
Cow position:
Alignm length: 456
Alignm identity: 293
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 212, 130

Conread position: 211-660
Cow position:
Alignm length: 460
Alignm identity: 301
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 154, 110

Conread position: 211-660
Cow position:
Alignm length: 463
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 61

Conread position: 211-660
Cow position:
Alignm length: 460
Alignm identity: 297
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 217, 158

Conread position: 221-688
Cow position:
Alignm length: 474
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 95

Conread position: 222-665
Cow position:
Alignm length: 464
Alignm identity: 300
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 227, 88

Conread position: 222-688
Cow position:
Alignm length: 477
Alignm identity: 299
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 197, 79

Conread position: 226-688
Cow position:
Alignm length: 473
Alignm identity: 306
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 61, 138

Conread position: 227-688
Cow position:
Alignm length: 468
Alignm identity: 292
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 213, 133

Conread position: 232-651
Cow position:
Alignm length: 437
Alignm identity: 288
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 134, 94

Conread position: 232-660
Cow position:
Alignm length: 451
Alignm identity: 301
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 128, 44

Conread position: 233-660
Cow position:
Alignm length: 442
Alignm identity: 295
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 114

Conread position: 235-687
Cow position:
Alignm length: 466
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 143

Conread position: 237-660
Cow position:
Alignm length: 434
Alignm identity: 290
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 171, 135

Conread position: 239-660
Cow position:
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 55

Conread position: 240-687
Cow position:
Alignm length: 462
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 123

Conread position: 247-658
Cow position:
Alignm length: 416
Alignm identity: 275
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 171, 29

Conread position: 250-634
Cow position:
Alignm length: 395
Alignm identity: 244
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 16, 238

Conread position: 254-525
Cow position:
Alignm length: 282
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 204, 47

Conread position: 254-660
Cow position:
Alignm length: 428
Alignm identity: 280
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 25, 18

Conread position: 255-688
Cow position:
Alignm length: 451
Alignm identity: 302
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 208, 39

Conread position: 259-598
Cow position:
Alignm length: 350
Alignm identity: 223
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 170, 104

Conread position: 260-661
Cow position:
Alignm length: 409
Alignm identity: 259
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 153, 40

Conread position: 273-654
Cow position:
Alignm length: 398
Alignm identity: 266
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 137, 90

Conread position: 367-687
Cow position:
Alignm length: 325
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 11

Conread position: 383-660
Cow position:
Alignm length: 299
Alignm identity: 220
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 66, 0

Conread position: 384-660
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 385-660
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 9, 251

Conread position: 386-687
Cow position:
Alignm length: 315
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 103

Conread position: 453-687
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 457-640
Cow position:
Alignm length: 184
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 457-658
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 6, 16

Conread position: 458-687
Cow position:
Alignm length: 236
Alignm identity: 143
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 79, 0

Conread position: 459-608
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 459-616
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 76, 122

Conread position: 459-619
Cow position:
Alignm length: 162
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 85, 141

Conread position: 459-642
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 459-657
Cow position:
Alignm length: 199
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 85, 0

Conread position: 459-658
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 24

Conread position: 459-658
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 65, 152

Conread position: 459-660
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 104

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 75, 54

Conread position: 459-660
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 459-660
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 26, 136

Conread position: 459-660
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 33, 40

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 79, 184

Conread position: 459-660
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 146

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 156

Conread position: 459-660
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 62, 105

Conread position: 459-660
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 188, 120

Conread position: 459-660
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 79, 166

Conread position: 459-660
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 22

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 160
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 78, 0

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 16, 25

Conread position: 459-685
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 84, 18

Conread position: 459-687
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 96, 78

Conread position: 459-687
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 77, 90

Conread position: 459-687
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 91, 84

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 459-687
Cow position:
Alignm length: 236
Alignm identity: 170
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 79, 136

Conread position: 459-687
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 89, 37

Conread position: 459-688
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 10, 209

Conread position: 460-660
Cow position:
Alignm length: 205
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 44, 11

Conread position: 460-709
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 78, 146

Conread position: 461-660
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 76, 0

Conread position: 461-687
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 198, 23

Conread position: 462-655
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 462-660
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 69, 178

Conread position: 462-687
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 78, 146

Conread position: 466-687
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 476-660
Cow position:
Alignm length: 185
Alignm identity: 146
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 484-660
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 121

Conread position: 492-660
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 492-687
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 49, 26

Conread position: 493-658
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 100

Conread position: 512-685
Cow position:
Alignm length: 178
Alignm identity: 142
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 512-690
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 516-636
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 36, 28

Conread position: 516-688
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 145, 30

Conread position: 522-687
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 156, 0

Conread position: 548-687
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 549-685
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 43

Conread position: 550-660
Cow position:
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.