Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C110032.5 |
| Conread position: | 194-663 |
| Cow position: | chr11:44155777-44155308 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 166, 90 |
| Conread position: | 195-660 |
| Cow position: | chr11:75553786-75553328 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 313 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 197-359 |
| Cow position: | chr11:3226824-3226991 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 77, 46 |
| Conread position: | 197-385 |
| Cow position: | chr11:29231754-29231566 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 142, 150 |
| Conread position: | 197-645 |
| Cow position: | chr11:10056725-10057178 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 129, 121 |
| Conread position: | 197-658 |
| Cow position: | chr11:1488946-1488486 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 172 |
| Conread position: | 197-660 |
| Cow position: | chr11:26784477-26784947 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 304 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 98, 150 |
| Conread position: | 197-660 |
| Cow position: | chr11:31927377-31927851 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 327 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 25 |
| Conread position: | 197-660 |
| Cow position: | chr11:43513399-43512933 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 312 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 98, 87 |
| Conread position: | 197-660 |
| Cow position: | chr11:44582117-44581648 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 87 |
| Conread position: | 197-661 |
| Cow position: | chr11:30208357-30208839 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 36 |
| Conread position: | 197-687 |
| Cow position: | chr11:47738314-47737824 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 71 |
| Conread position: | 197-688 |
| Cow position: | chr11:13064758-13064253 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 119 |
| Conread position: | 197-689 |
| Cow position: | chr11:87142807-87143308 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 321 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 213, 172 |
| Conread position: | 198-621 |
| Cow position: | chr11:18888049-18888470 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 7, 59 |
| Conread position: | 200-660 |
| Cow position: | chr11:3856432-3856902 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 11 |
| Conread position: | 200-690 |
| Cow position: | chr11:26548756-26549253 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 79 |
| Conread position: | 203-660 |
| Cow position: | chr11:10848681-10849133 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 311 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 12, 167 |
| Conread position: | 204-660 |
| Cow position: | chr11:4034163-4033708 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 150, 117 |
| Conread position: | 204-687 |
| Cow position: | chr11:30253458-30253948 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 144 |
| Conread position: | 205-460 |
| Cow position: | chr11:18069704-18069457 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 207-335 |
| Cow position: | chr11:21475356-21475484 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-335 |
| Cow position: | chr11:49039145-49039017 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-370 |
| Cow position: | chr11:41234250-41234413 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-631 |
| Cow position: | chr11:67451728-67452157 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 282 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 203, 151 |
| Conread position: | 207-636 |
| Cow position: | chr11:44517630-44517194 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 156 |
| Conread position: | 207-658 |
| Cow position: | chr11:42311209-42310748 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 242, 36 |
| Conread position: | 207-660 |
| Cow position: | chr11:4026376-4025915 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 300 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 201, 162 |
| Conread position: | 207-660 |
| Cow position: | chr11:9733445-9732987 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 81 |
| Conread position: | 207-660 |
| Cow position: | chr11:12357166-12356706 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 65 |
| Conread position: | 207-660 |
| Cow position: | chr11:17119108-17118651 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 77 |
| Conread position: | 207-660 |
| Cow position: | chr11:32453067-32453527 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 156 |
| Conread position: | 207-660 |
| Cow position: | chr11:38834212-38833775 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 63 |
| Conread position: | 207-660 |
| Cow position: | chr11:50836432-50835968 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 156 |
| Conread position: | 207-660 |
| Cow position: | chr11:66730315-66730760 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 312 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 255, 78 |
| Conread position: | 207-676 |
| Cow position: | chr11:67154914-67155388 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 123 |
| Conread position: | 207-687 |
| Cow position: | chr11:3494225-3494704 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 156 |
| Conread position: | 207-687 |
| Cow position: | chr11:15986487-15986970 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 10 |
| Conread position: | 207-687 |
| Cow position: | chr11:17106446-17105964 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 156 |
| Conread position: | 207-687 |
| Cow position: | chr11:19062841-19062352 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 156 |
| Conread position: | 207-687 |
| Cow position: | chr11:19101258-19100767 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-687 |
| Cow position: | chr11:20732999-20732509 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 156 |
| Conread position: | 207-687 |
| Cow position: | chr11:26123691-26123199 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 77 |
| Conread position: | 207-687 |
| Cow position: | chr11:27657663-27658161 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 331 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 77, 163 |
| Conread position: | 207-687 |
| Cow position: | chr11:28228532-28228045 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 253 |
| Conread position: | 207-687 |
| Cow position: | chr11:31863320-31863811 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 174 |
| Conread position: | 207-687 |
| Cow position: | chr11:53285937-53285451 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 162 |
| Conread position: | 207-687 |
| Cow position: | chr11:53430800-53430308 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 174 |
| Conread position: | 207-687 |
| Cow position: | chr11:73134539-73135020 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 30 |
| Conread position: | 207-687 |
| Cow position: | chr11:86876648-86876160 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 156 |
| Conread position: | 207-688 |
| Cow position: | chr11:49238723-49238240 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 137, 44 |
| Conread position: | 207-690 |
| Cow position: | chr11:26069806-26069321 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 133 |
| Conread position: | 207-690 |
| Cow position: | chr11:61399869-61399376 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 156 |
| Conread position: | 209-660 |
| Cow position: | chr11:17547395-17547853 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 154 |
| Conread position: | 209-687 |
| Cow position: | chr11:67845334-67844847 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 154 |
| Conread position: | 210-455 |
| Cow position: | chr11:49558074-49557832 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 136, 41 |
| Conread position: | 210-660 |
| Cow position: | chr11:23881266-23881716 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 300 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 218, 62 |
| Conread position: | 210-687 |
| Cow position: | chr11:85392595-85392110 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 317 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 86, 74 |
| Conread position: | 210-690 |
| Cow position: | chr11:41169457-41168978 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 62 |
| Conread position: | 211-657 |
| Cow position: | chr11:60032991-60032552 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 212, 130 |
| Conread position: | 211-660 |
| Cow position: | chr11:10883528-10883980 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 301 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 154, 110 |
| Conread position: | 211-660 |
| Cow position: | chr11:29667358-29666899 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 211-660 |
| Cow position: | chr11:72309800-72309343 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 297 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 217, 158 |
| Conread position: | 221-688 |
| Cow position: | chr11:13048519-13048072 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 95 |
| Conread position: | 222-665 |
| Cow position: | chr11:21137327-21137764 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 300 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 227, 88 |
| Conread position: | 222-688 |
| Cow position: | chr11:21889267-21888807 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 299 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 197, 79 |
| Conread position: | 226-688 |
| Cow position: | chr11:63647312-63647778 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 61, 138 |
| Conread position: | 227-688 |
| Cow position: | chr11:1134166-1134623 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 213, 133 |
| Conread position: | 232-651 |
| Cow position: | chr11:11578479-11578048 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 134, 94 |
| Conread position: | 232-660 |
| Cow position: | chr11:50949061-50948618 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 128, 44 |
| Conread position: | 233-660 |
| Cow position: | chr11:25393446-25393882 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 128, 114 |
| Conread position: | 235-687 |
| Cow position: | chr11:40405789-40405330 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 143 |
| Conread position: | 237-660 |
| Cow position: | chr11:7117677-7118101 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 171, 135 |
| Conread position: | 239-660 |
| Cow position: | chr11:9224325-9223890 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 55 |
| Conread position: | 240-687 |
| Cow position: | chr11:44041976-44042434 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 123 |
| Conread position: | 247-658 |
| Cow position: | chr11:73468603-73468203 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 171, 29 |
| Conread position: | 250-634 |
| Cow position: | chr11:20506530-20506920 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 16, 238 |
| Conread position: | 254-525 |
| Cow position: | chr11:44231736-44232006 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 204, 47 |
| Conread position: | 254-660 |
| Cow position: | chr11:12318744-12318321 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 255-688 |
| Cow position: | chr11:35254015-35253574 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 302 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 208, 39 |
| Conread position: | 259-598 |
| Cow position: | chr11:47728404-47728058 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 170, 104 |
| Conread position: | 260-661 |
| Cow position: | chr11:31540528-31540920 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 153, 40 |
| Conread position: | 273-654 |
| Cow position: | chr11:78672533-78672150 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 137, 90 |
| Conread position: | 367-687 |
| Cow position: | chr11:28109149-28109472 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 383-660 |
| Cow position: | chr11:42371206-42371504 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 384-660 |
| Cow position: | chr11:10957210-10957508 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 385-660 |
| Cow position: | chr11:24394707-24395006 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 251 |
| Conread position: | 386-687 |
| Cow position: | chr11:21470210-21470521 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 62, 103 |
| Conread position: | 453-687 |
| Cow position: | chr11:419251-419007 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 457-640 |
| Cow position: | chr11:11133149-11133330 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 457-658 |
| Cow position: | chr11:28673253-28673054 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 6, 16 |
| Conread position: | 458-687 |
| Cow position: | chr11:32453540-32453775 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-608 |
| Cow position: | chr11:52436339-52436492 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-616 |
| Cow position: | chr11:30182365-30182206 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 76, 122 |
| Conread position: | 459-619 |
| Cow position: | chr11:18069437-18069277 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 85, 141 |
| Conread position: | 459-642 |
| Cow position: | chr11:85732554-85732362 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-657 |
| Cow position: | chr11:27835243-27835046 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 459-658 |
| Cow position: | chr11:7317404-7317607 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 24 |
| Conread position: | 459-658 |
| Cow position: | chr11:49038891-49038687 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 65, 152 |
| Conread position: | 459-660 |
| Cow position: | chr11:4054846-4054638 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 459-660 |
| Cow position: | chr11:4062387-4062187 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 75, 54 |
| Conread position: | 459-660 |
| Cow position: | chr11:4268676-4268469 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | chr11:12094829-12095033 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 26, 136 |
| Conread position: | 459-660 |
| Cow position: | chr11:20212676-20212473 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 33, 40 |
| Conread position: | 459-660 |
| Cow position: | chr11:21898194-21897990 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 79, 184 |
| Conread position: | 459-660 |
| Cow position: | chr11:23248979-23248787 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 146 |
| Conread position: | 459-660 |
| Cow position: | chr11:27668265-27668061 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 156 |
| Conread position: | 459-660 |
| Cow position: | chr11:32079297-32079094 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 459-660 |
| Cow position: | chr11:33976301-33976101 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 188, 120 |
| Conread position: | 459-660 |
| Cow position: | chr11:37070841-37070633 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 79, 166 |
| Conread position: | 459-660 |
| Cow position: | chr11:40329467-40329259 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 22 |
| Conread position: | 459-660 |
| Cow position: | chr11:44094131-44093926 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-660 |
| Cow position: | chr11:46779373-46779170 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 459-685 |
| Cow position: | chr11:44253562-44253793 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 18 |
| Conread position: | 459-687 |
| Cow position: | chr11:8265006-8265236 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 96, 78 |
| Conread position: | 459-687 |
| Cow position: | chr11:8445640-8445405 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 77, 90 |
| Conread position: | 459-687 |
| Cow position: | chr11:11590457-11590682 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 91, 84 |
| Conread position: | 459-687 |
| Cow position: | chr11:27726429-27726195 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-687 |
| Cow position: | chr11:28713829-28714063 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 79, 136 |
| Conread position: | 459-687 |
| Cow position: | chr11:66860999-66860770 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 459-688 |
| Cow position: | chr11:3227232-3227469 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 209 |
| Conread position: | 460-660 |
| Cow position: | chr11:39482813-39483012 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 460-709 |
| Cow position: | chr11:30189216-30189470 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 78, 146 |
| Conread position: | 461-660 |
| Cow position: | chr11:32479328-32479125 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 461-687 |
| Cow position: | chr11:42364221-42364442 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 198, 23 |
| Conread position: | 462-655 |
| Cow position: | chr11:30122370-30122174 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 462-660 |
| Cow position: | chr11:40774534-40774336 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 69, 178 |
| Conread position: | 462-687 |
| Cow position: | chr11:41100473-41100703 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 78, 146 |
| Conread position: | 466-687 |
| Cow position: | chr11:58137906-58138137 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 476-660 |
| Cow position: | chr11:24291967-24292151 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 484-660 |
| Cow position: | chr11:14261717-14261539 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 54, 121 |
| Conread position: | 492-660 |
| Cow position: | chr11:15126304-15126477 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 492-687 |
| Cow position: | chr11:33603114-33602914 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 493-658 |
| Cow position: | chr11:25182284-25182449 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 512-685 |
| Cow position: | chr11:7720847-7720670 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 512-690 |
| Cow position: | chr11:52421005-52421189 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 516-636 |
| Cow position: | chr11:67244547-67244427 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 516-688 |
| Cow position: | chr11:23125528-23125360 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 145, 30 |
| Conread position: | 522-687 |
| Cow position: | chr11:56918185-56918352 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 548-687 |
| Cow position: | chr11:63391903-63391762 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 549-685 |
| Cow position: | chr11:71331081-71331217 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 112, 43 |
| Conread position: | 550-660 |
| Cow position: | chr11:63653725-63653615 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.