Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C110032.5 |
| Conread position: | 170-661 |
| Cow position: | |
| Alignm length: | 500 |
| Alignm identity: | 310 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 240, 55 |
| Conread position: | 197-608 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 211, 163 |
| Conread position: | 197-657 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 299 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 61, 87 |
| Conread position: | 197-687 |
| Cow position: | |
| Alignm length: | 501 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 21 |
| Conread position: | 197-687 |
| Cow position: | |
| Alignm length: | 505 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 166 |
| Conread position: | 197-688 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 172 |
| Conread position: | 198-660 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 451 |
| Conread position: | 204-660 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 126 |
| Conread position: | 206-686 |
| Cow position: | |
| Alignm length: | 510 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 24 |
| Conread position: | 207-359 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 207-367 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-370 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 207-370 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-370 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-641 |
| Cow position: | |
| Alignm length: | 444 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 78 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 65 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 156 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 257 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 308 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 77 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 303 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 203, 162 |
| Conread position: | 207-665 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 126, 20 |
| Conread position: | 207-686 |
| Cow position: | |
| Alignm length: | 504 |
| Alignm identity: | 329 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 252, 78 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 496 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 171 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 495 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 43 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 502 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 76, 149 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 491 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 502 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 93 |
| Conread position: | 208-660 |
| Cow position: | |
| Alignm length: | 468 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 108 |
| Conread position: | 208-687 |
| Cow position: | |
| Alignm length: | 511 |
| Alignm identity: | 336 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 254, 113 |
| Conread position: | 208-690 |
| Cow position: | |
| Alignm length: | 491 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 170 |
| Conread position: | 209-647 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 307 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 240, 112 |
| Conread position: | 210-648 |
| Cow position: | |
| Alignm length: | 448 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 263, 106 |
| Conread position: | 210-687 |
| Cow position: | |
| Alignm length: | 489 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 159 |
| Conread position: | 211-641 |
| Cow position: | |
| Alignm length: | 437 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 89, 73 |
| Conread position: | 211-657 |
| Cow position: | |
| Alignm length: | 453 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 217, 89 |
| Conread position: | 211-660 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 73 |
| Conread position: | 211-660 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 317 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 98, 106 |
| Conread position: | 214-687 |
| Cow position: | |
| Alignm length: | 491 |
| Alignm identity: | 327 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 194, 102 |
| Conread position: | 221-649 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 287 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 120, 128 |
| Conread position: | 222-640 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 287 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 186, 25 |
| Conread position: | 223-659 |
| Cow position: | |
| Alignm length: | 443 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 66, 61 |
| Conread position: | 223-660 |
| Cow position: | |
| Alignm length: | 441 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 74 |
| Conread position: | 232-658 |
| Cow position: | |
| Alignm length: | 436 |
| Alignm identity: | 285 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 196, 131 |
| Conread position: | 235-658 |
| Cow position: | |
| Alignm length: | 447 |
| Alignm identity: | 305 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 137, 86 |
| Conread position: | 237-660 |
| Cow position: | |
| Alignm length: | 435 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 81 |
| Conread position: | 239-660 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 175, 133 |
| Conread position: | 261-660 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 289 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 78, 93 |
| Conread position: | 262-687 |
| Cow position: | |
| Alignm length: | 438 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 107 |
| Conread position: | 268-647 |
| Cow position: | |
| Alignm length: | 410 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 93 |
| Conread position: | 294-687 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 263 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 148, 69 |
| Conread position: | 381-660 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 93, 79 |
| Conread position: | 384-661 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 62, 188 |
| Conread position: | 386-687 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 64, 136 |
| Conread position: | 397-608 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 106 |
| Conread position: | 439-687 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 454-660 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 458-656 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 20 |
| Conread position: | 459-655 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 84, 57 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 41 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 78, 133 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-688 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 200, 61 |
| Conread position: | 460-660 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 134, 94 |
| Conread position: | 460-660 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 460-687 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 462-658 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 462-660 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 86, 9 |
| Conread position: | 462-660 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 462-661 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 76, 108 |
| Conread position: | 462-661 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 462-687 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 462-687 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 76, 185 |
| Conread position: | 463-660 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 466-687 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 468-687 |
| Cow position: | |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 149 |
| Conread position: | 475-688 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 185, 73 |
| Conread position: | 476-660 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 43 |
| Conread position: | 482-660 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 484-660 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 498-656 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 510-688 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 525-650 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 535-660 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 535-688 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 113 |
| Conread position: | 547-660 |
| Cow position: | |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 548-660 |
| Cow position: | |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 548-660 |
| Cow position: | |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 563-687 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 116, 0 |
Show alignments to all cow chromosomes.