Cow genome map

Conread name: Ss1.1-LyN1-MLN01C110032.5

Conread position: 178-654
Cow position:
Alignm length: 487
Alignm identity: 306
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 8

Conread position: 180-660
Cow position:
Alignm length: 490
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 205

Conread position: 188-687
Cow position:
Alignm length: 513
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 9

Conread position: 192-358
Cow position:
Alignm length: 167
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 194-619
Cow position:
Alignm length: 450
Alignm identity: 298
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 14, 93

Conread position: 196-457
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 182, 112

Conread position: 197-367
Cow position:
Alignm length: 172
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 137, 0

Conread position: 197-371
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 145

Conread position: 197-619
Cow position:
Alignm length: 442
Alignm identity: 283
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 213, 165

Conread position: 197-658
Cow position:
Alignm length: 487
Alignm identity: 318
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 98, 87

Conread position: 197-659
Cow position:
Alignm length: 483
Alignm identity: 313
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 11, 88

Conread position: 197-660
Cow position:
Alignm length: 471
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 266

Conread position: 197-660
Cow position:
Alignm length: 473
Alignm identity: 312
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 265, 145

Conread position: 197-686
Cow position:
Alignm length: 507
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 97

Conread position: 197-687
Cow position:
Alignm length: 505
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 68

Conread position: 200-660
Cow position:
Alignm length: 473
Alignm identity: 303
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 96, 84

Conread position: 200-688
Cow position:
Alignm length: 514
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 77

Conread position: 204-358
Cow position:
Alignm length: 155
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 205-536
Cow position:
Alignm length: 349
Alignm identity: 238
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 156, 54

Conread position: 205-589
Cow position:
Alignm length: 393
Alignm identity: 266
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 203, 12

Conread position: 205-658
Cow position:
Alignm length: 470
Alignm identity: 305
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 250, 84

Conread position: 205-658
Cow position:
Alignm length: 472
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 22

Conread position: 205-660
Cow position:
Alignm length: 465
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 158

Conread position: 205-661
Cow position:
Alignm length: 466
Alignm identity: 301
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 155

Conread position: 205-689
Cow position:
Alignm length: 500
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 13

Conread position: 207-358
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 207-359
Cow position:
Alignm length: 153
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 207-460
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 103, 0

Conread position: 207-553
Cow position:
Alignm length: 355
Alignm identity: 227
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 221, 154

Conread position: 207-593
Cow position:
Alignm length: 397
Alignm identity: 259
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 221, 154

Conread position: 207-658
Cow position:
Alignm length: 465
Alignm identity: 301
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 80, 69

Conread position: 207-659
Cow position:
Alignm length: 467
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 69

Conread position: 207-660
Cow position:
Alignm length: 462
Alignm identity: 300
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 72, 63

Conread position: 207-660
Cow position:
Alignm length: 462
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 63

Conread position: 207-660
Cow position:
Alignm length: 461
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 77

Conread position: 207-660
Cow position:
Alignm length: 468
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 77

Conread position: 207-660
Cow position:
Alignm length: 465
Alignm identity: 307
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 203, 69

Conread position: 207-660
Cow position:
Alignm length: 465
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 39

Conread position: 207-660
Cow position:
Alignm length: 468
Alignm identity: 309
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 93, 77

Conread position: 207-687
Cow position:
Alignm length: 493
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 162

Conread position: 207-687
Cow position:
Alignm length: 501
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 12

Conread position: 207-687
Cow position:
Alignm length: 497
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 156

Conread position: 207-687
Cow position:
Alignm length: 490
Alignm identity: 313
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 204, 55

Conread position: 207-687
Cow position:
Alignm length: 498
Alignm identity: 315
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 219, 156

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 77

Conread position: 207-687
Cow position:
Alignm length: 494
Alignm identity: 322
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 77

Conread position: 207-687
Cow position:
Alignm length: 499
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 15

Conread position: 207-687
Cow position:
Alignm length: 493
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 20

Conread position: 207-687
Cow position:
Alignm length: 497
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-687
Cow position:
Alignm length: 492
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 162

Conread position: 207-687
Cow position:
Alignm length: 494
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 108

Conread position: 207-689
Cow position:
Alignm length: 491
Alignm identity: 310
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 104, 43

Conread position: 208-662
Cow position:
Alignm length: 465
Alignm identity: 293
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 217, 27

Conread position: 208-665
Cow position:
Alignm length: 479
Alignm identity: 308
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 67, 27

Conread position: 208-687
Cow position:
Alignm length: 492
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 155

Conread position: 209-559
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 196, 119

Conread position: 209-660
Cow position:
Alignm length: 475
Alignm identity: 317
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 244, 97

Conread position: 210-644
Cow position:
Alignm length: 445
Alignm identity: 285
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 171

Conread position: 210-658
Cow position:
Alignm length: 465
Alignm identity: 306
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 85, 74

Conread position: 210-660
Cow position:
Alignm length: 469
Alignm identity: 308
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 79, 74

Conread position: 210-687
Cow position:
Alignm length: 490
Alignm identity: 312
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 85, 12

Conread position: 213-455
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 147, 0

Conread position: 221-370
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 223-661
Cow position:
Alignm length: 454
Alignm identity: 285
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 141

Conread position: 227-648
Cow position:
Alignm length: 437
Alignm identity: 281
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 183, 164

Conread position: 230-453
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 232-660
Cow position:
Alignm length: 440
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 131

Conread position: 232-660
Cow position:
Alignm length: 440
Alignm identity: 292
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 68, 60

Conread position: 232-660
Cow position:
Alignm length: 438
Alignm identity: 281
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 176, 146

Conread position: 235-660
Cow position:
Alignm length: 446
Alignm identity: 295
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 183, 134

Conread position: 240-660
Cow position:
Alignm length: 432
Alignm identity: 283
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 102, 109

Conread position: 242-654
Cow position:
Alignm length: 419
Alignm identity: 267
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 9, 51

Conread position: 262-658
Cow position:
Alignm length: 401
Alignm identity: 255
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 276, 83

Conread position: 262-700
Cow position:
Alignm length: 452
Alignm identity: 287
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 107

Conread position: 275-455
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 342-660
Cow position:
Alignm length: 341
Alignm identity: 239
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 117, 11

Conread position: 348-658
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 253

Conread position: 384-687
Cow position:
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 51

Conread position: 384-689
Cow position:
Alignm length: 314
Alignm identity: 211
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 77, 116

Conread position: 385-660
Cow position:
Alignm length: 280
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 174

Conread position: 386-660
Cow position:
Alignm length: 293
Alignm identity: 202
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 99

Conread position: 432-651
Cow position:
Alignm length: 225
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 23

Conread position: 437-687
Cow position:
Alignm length: 258
Alignm identity: 185
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 99, 10

Conread position: 456-655
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 87, 161

Conread position: 459-603
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 459-651
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 185

Conread position: 459-652
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 459-660
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 77, 0

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 79, 0

Conread position: 459-660
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 181, 63

Conread position: 459-660
Cow position:
Alignm length: 205
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 88, 162

Conread position: 459-660
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 79, 163

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 78, 0

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 88, 0

Conread position: 459-682
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 207

Conread position: 459-687
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 177
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 79, 0

Conread position: 459-687
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 79, 90

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 178
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 78, 0

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 79, 0

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 460-616
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 460-660
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 460-660
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 83, 161

Conread position: 460-688
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 89

Conread position: 461-654
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 28

Conread position: 462-651
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 76, 128

Conread position: 462-654
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 81, 119

Conread position: 462-660
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 85

Conread position: 462-660
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 462-660
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 94, 16

Conread position: 462-660
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 462-672
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 177, 62

Conread position: 462-688
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 189

Conread position: 464-655
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 130

Conread position: 465-687
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 72, 0

Conread position: 465-687
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 26

Conread position: 465-687
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 145

Conread position: 466-660
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 466-660
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 11, 0

Conread position: 468-658
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 476-660
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 80, 32

Conread position: 484-660
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 488-687
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 0

Conread position: 490-657
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 492-687
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 493-676
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 506-660
Cow position:
Alignm length: 159
Alignm identity: 128
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 37, 90

Conread position: 512-660
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 70

Conread position: 515-688
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 163, 39

Conread position: 535-660
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 535-660
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 535-660
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 535-660
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 46

Conread position: 535-687
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 143, 0

Conread position: 539-687
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 548-660
Cow position:
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 548-660
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 58, 74

Conread position: 548-688
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 130, 36

Conread position: 553-660
Cow position:
Alignm length: 108
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-687
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 557-660
Cow position:
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 557-687
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 121, 0

Show alignments to all cow chromosomes.