Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C110032.5 |
| Conread position: | 187-457 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 188-660 |
| Cow position: | |
| Alignm length: | 476 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 104 |
| Conread position: | 197-660 |
| Cow position: | |
| Alignm length: | 476 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 71 |
| Conread position: | 197-660 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 304 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 221, 65 |
| Conread position: | 197-660 |
| Cow position: | |
| Alignm length: | 476 |
| Alignm identity: | 309 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 51, 211 |
| Conread position: | 197-687 |
| Cow position: | |
| Alignm length: | 502 |
| Alignm identity: | 321 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 98, 87 |
| Conread position: | 197-688 |
| Cow position: | |
| Alignm length: | 505 |
| Alignm identity: | 325 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 198-355 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 205-660 |
| Cow position: | |
| Alignm length: | 461 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 191 |
| Conread position: | 206-660 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 166 |
| Conread position: | 207-530 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 217, 153 |
| Conread position: | 207-536 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 201, 154 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 303 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 211, 32 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 310 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 82, 47 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 253 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 77 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 492 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 63 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 493 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 77 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 489 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 156 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 497 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 76 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 495 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 78 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 491 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-690 |
| Cow position: | |
| Alignm length: | 497 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 162 |
| Conread position: | 208-660 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 301 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 84, 19 |
| Conread position: | 209-657 |
| Cow position: | |
| Alignm length: | 475 |
| Alignm identity: | 311 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 199, 151 |
| Conread position: | 211-687 |
| Cow position: | |
| Alignm length: | 494 |
| Alignm identity: | 323 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 84, 73 |
| Conread position: | 221-373 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 140, 83 |
| Conread position: | 222-660 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 292 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 59, 73 |
| Conread position: | 232-660 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 52 |
| Conread position: | 235-660 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 175, 143 |
| Conread position: | 236-660 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 53, 107 |
| Conread position: | 243-657 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 285 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 302, 15 |
| Conread position: | 248-687 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 115 |
| Conread position: | 250-660 |
| Cow position: | |
| Alignm length: | 421 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 110, 177 |
| Conread position: | 261-680 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 23 |
| Conread position: | 262-690 |
| Cow position: | |
| Alignm length: | 445 |
| Alignm identity: | 286 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 29, 104 |
| Conread position: | 350-652 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 8 |
| Conread position: | 353-660 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 185, 5 |
| Conread position: | 363-652 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 383-660 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 158 |
| Conread position: | 452-661 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 76, 61 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 79, 89 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 33, 160 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-682 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 146, 180 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-688 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 84, 192 |
| Conread position: | 459-688 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 81, 14 |
| Conread position: | 459-693 |
| Cow position: | |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 460-660 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 117 |
| Conread position: | 463-619 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 463-631 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 75, 89 |
| Conread position: | 465-660 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 465-660 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 73, 139 |
| Conread position: | 467-687 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 70, 163 |
| Conread position: | 476-631 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 50 |
| Conread position: | 488-660 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 495-660 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 500-660 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 506-687 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 510-688 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 513-660 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 516-654 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 535-658 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 535-660 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 535-687 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 535-687 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 548-658 |
| Cow position: | |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 548-687 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 130, 0 |
Show alignments to all cow chromosomes.