Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C110032.5 |
| Conread position: | 181-684 |
| Cow position: | |
| Alignm length: | 516 |
| Alignm identity: | 327 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 196-460 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 58, 172 |
| Conread position: | 196-657 |
| Cow position: | |
| Alignm length: | 474 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 71 |
| Conread position: | 197-367 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 197-641 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 79 |
| Conread position: | 197-656 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 70 |
| Conread position: | 197-660 |
| Cow position: | |
| Alignm length: | 484 |
| Alignm identity: | 309 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 11, 182 |
| Conread position: | 197-686 |
| Cow position: | |
| Alignm length: | 500 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 184 |
| Conread position: | 197-687 |
| Cow position: | |
| Alignm length: | 518 |
| Alignm identity: | 337 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 265, 163 |
| Conread position: | 197-687 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 100 |
| Conread position: | 199-352 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 205-660 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 310 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 206-660 |
| Cow position: | |
| Alignm length: | 460 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 115 |
| Conread position: | 206-687 |
| Cow position: | |
| Alignm length: | 496 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 89, 78 |
| Conread position: | 207-387 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 207-535 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 154, 175 |
| Conread position: | 207-594 |
| Cow position: | |
| Alignm length: | 408 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 119, 90 |
| Conread position: | 207-645 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 283 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 259, 60 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 299 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 73, 201 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 156 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 211, 111 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 468 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 89, 77 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 163 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 496 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 7 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 490 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 77 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 492 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 161 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 494 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 156 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 491 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 171 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 492 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 154 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 495 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 80 |
| Conread position: | 207-723 |
| Cow position: | |
| Alignm length: | 534 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 151 |
| Conread position: | 208-359 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 210-672 |
| Cow position: | |
| Alignm length: | 496 |
| Alignm identity: | 333 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 249, 71 |
| Conread position: | 210-687 |
| Cow position: | |
| Alignm length: | 488 |
| Alignm identity: | 314 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 74 |
| Conread position: | 221-660 |
| Cow position: | |
| Alignm length: | 443 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 27 |
| Conread position: | 222-660 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 311 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 230, 108 |
| Conread position: | 227-517 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 168, 132 |
| Conread position: | 227-660 |
| Cow position: | |
| Alignm length: | 444 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 232 |
| Conread position: | 230-660 |
| Cow position: | |
| Alignm length: | 456 |
| Alignm identity: | 307 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 7, 55 |
| Conread position: | 232-660 |
| Cow position: | |
| Alignm length: | 437 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 220, 60 |
| Conread position: | 232-660 |
| Cow position: | |
| Alignm length: | 440 |
| Alignm identity: | 289 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 191, 98 |
| Conread position: | 232-660 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 129, 56 |
| Conread position: | 232-687 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 301 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 180, 131 |
| Conread position: | 247-660 |
| Cow position: | |
| Alignm length: | 426 |
| Alignm identity: | 280 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 172, 11 |
| Conread position: | 365-687 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 23, 309 |
| Conread position: | 372-688 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 21, 282 |
| Conread position: | 375-660 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 380-658 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 31, 68 |
| Conread position: | 384-660 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 385-619 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 72, 184 |
| Conread position: | 385-659 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 71, 135 |
| Conread position: | 386-659 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 58, 112 |
| Conread position: | 387-660 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 406-662 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 454-660 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 458-660 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 459-600 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-658 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 459-659 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 84, 196 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 79, 177 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 81, 24 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 77, 148 |
| Conread position: | 459-677 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 176, 46 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-688 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 179, 80 |
| Conread position: | 460-655 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 461-687 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 462-654 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 462-660 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 76, 105 |
| Conread position: | 462-676 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 466-645 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 42 |
| Conread position: | 466-651 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 466-660 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 7 |
| Conread position: | 466-660 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 476-660 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 60, 72 |
| Conread position: | 476-660 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 476-687 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 480-687 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 484-676 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 514-660 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 534-660 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 535-657 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 547-660 |
| Cow position: | |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 548-656 |
| Cow position: | |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.