Cow genome map

Conread name: Ss1.1-LyN1-MLN01C110032.5

Conread position: 195-651
Cow position:
Alignm length: 479
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 9

Conread position: 197-370
Cow position:
Alignm length: 174
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 197-658
Cow position:
Alignm length: 471
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 74

Conread position: 197-660
Cow position:
Alignm length: 476
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 86

Conread position: 197-660
Cow position:
Alignm length: 477
Alignm identity: 301
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 253, 116

Conread position: 197-676
Cow position:
Alignm length: 497
Alignm identity: 319
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 20, 39

Conread position: 202-658
Cow position:
Alignm length: 469
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 21

Conread position: 204-659
Cow position:
Alignm length: 469
Alignm identity: 307
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 246, 168

Conread position: 205-616
Cow position:
Alignm length: 437
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 205-660
Cow position:
Alignm length: 477
Alignm identity: 311
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 160, 256

Conread position: 207-457
Cow position:
Alignm length: 251
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 207-573
Cow position:
Alignm length: 377
Alignm identity: 245
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 221, 154

Conread position: 207-581
Cow position:
Alignm length: 386
Alignm identity: 244
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 269, 162

Conread position: 207-631
Cow position:
Alignm length: 441
Alignm identity: 281
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 66, 72

Conread position: 207-641
Cow position:
Alignm length: 447
Alignm identity: 295
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 93, 77

Conread position: 207-648
Cow position:
Alignm length: 457
Alignm identity: 291
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 17

Conread position: 207-660
Cow position:
Alignm length: 467
Alignm identity: 307
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 66, 83

Conread position: 207-660
Cow position:
Alignm length: 462
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 43

Conread position: 207-660
Cow position:
Alignm length: 462
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 165

Conread position: 207-660
Cow position:
Alignm length: 456
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 77

Conread position: 207-660
Cow position:
Alignm length: 467
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 65

Conread position: 207-660
Cow position:
Alignm length: 465
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 162

Conread position: 207-660
Cow position:
Alignm length: 461
Alignm identity: 299
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 221, 40

Conread position: 207-660
Cow position:
Alignm length: 467
Alignm identity: 303
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 93, 77

Conread position: 207-662
Cow position:
Alignm length: 474
Alignm identity: 303
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 118, 70

Conread position: 207-676
Cow position:
Alignm length: 485
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 264

Conread position: 207-678
Cow position:
Alignm length: 479
Alignm identity: 313
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 221, 103

Conread position: 207-687
Cow position:
Alignm length: 496
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 175

Conread position: 207-687
Cow position:
Alignm length: 506
Alignm identity: 337
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 147, 14

Conread position: 207-687
Cow position:
Alignm length: 499
Alignm identity: 325
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 84, 63

Conread position: 207-687
Cow position:
Alignm length: 497
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-687
Cow position:
Alignm length: 496
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-687
Cow position:
Alignm length: 491
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 173

Conread position: 207-687
Cow position:
Alignm length: 493
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 103

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-687
Cow position:
Alignm length: 493
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 320
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 93, 77

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 77

Conread position: 207-687
Cow position:
Alignm length: 497
Alignm identity: 328
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 93, 77

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 77

Conread position: 207-687
Cow position:
Alignm length: 499
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 174

Conread position: 207-687
Cow position:
Alignm length: 496
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 12

Conread position: 210-687
Cow position:
Alignm length: 491
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 74

Conread position: 211-660
Cow position:
Alignm length: 462
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 59

Conread position: 211-669
Cow position:
Alignm length: 472
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 158

Conread position: 211-687
Cow position:
Alignm length: 493
Alignm identity: 315
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 84, 73

Conread position: 221-687
Cow position:
Alignm length: 475
Alignm identity: 305
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 154, 120

Conread position: 222-660
Cow position:
Alignm length: 454
Alignm identity: 303
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 73, 62

Conread position: 222-660
Cow position:
Alignm length: 449
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 141

Conread position: 227-660
Cow position:
Alignm length: 446
Alignm identity: 278
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 51, 29

Conread position: 228-652
Cow position:
Alignm length: 449
Alignm identity: 306
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 91, 19

Conread position: 232-660
Cow position:
Alignm length: 437
Alignm identity: 290
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 169, 98

Conread position: 232-660
Cow position:
Alignm length: 436
Alignm identity: 275
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 60, 65

Conread position: 232-660
Cow position:
Alignm length: 439
Alignm identity: 286
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 199, 110

Conread position: 238-660
Cow position:
Alignm length: 442
Alignm identity: 294
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 90, 102

Conread position: 238-660
Cow position:
Alignm length: 432
Alignm identity: 288
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 123, 71

Conread position: 238-660
Cow position:
Alignm length: 434
Alignm identity: 283
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 172, 48

Conread position: 262-687
Cow position:
Alignm length: 441
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 32

Conread position: 275-682
Cow position:
Alignm length: 415
Alignm identity: 277
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 161, 104

Conread position: 286-654
Cow position:
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 77

Conread position: 294-660
Cow position:
Alignm length: 377
Alignm identity: 250
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 67, 12

Conread position: 307-660
Cow position:
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 86

Conread position: 310-653
Cow position:
Alignm length: 365
Alignm identity: 249
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 148, 36

Conread position: 359-687
Cow position:
Alignm length: 336
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 49

Conread position: 368-660
Cow position:
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 77

Conread position: 384-660
Cow position:
Alignm length: 296
Alignm identity: 214
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 73, 111

Conread position: 384-660
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 65, 22

Conread position: 384-687
Cow position:
Alignm length: 321
Alignm identity: 220
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 65, 152

Conread position: 400-660
Cow position:
Alignm length: 271
Alignm identity: 180
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 198

Conread position: 455-660
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 81, 170

Conread position: 456-619
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 79, 41

Conread position: 457-652
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 457-678
Cow position:
Alignm length: 225
Alignm identity: 148
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 81, 14

Conread position: 459-635
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 0

Conread position: 459-636
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 459-640
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 94, 58

Conread position: 459-658
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 79, 13

Conread position: 459-660
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 459-660
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 30, 19

Conread position: 459-660
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 84, 12

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 24

Conread position: 459-660
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 79, 87

Conread position: 459-660
Cow position:
Alignm length: 205
Alignm identity: 156
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 79, 24

Conread position: 459-660
Cow position:
Alignm length: 202
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 459-660
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 78, 46

Conread position: 459-682
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 158

Conread position: 459-686
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 96, 46

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 78, 0

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 76, 0

Conread position: 459-687
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 79, 166

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 78, 0

Conread position: 459-687
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 459-688
Cow position:
Alignm length: 233
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 179, 46

Conread position: 460-652
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 136

Conread position: 460-660
Cow position:
Alignm length: 209
Alignm identity: 161
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 78, 45

Conread position: 460-660
Cow position:
Alignm length: 209
Alignm identity: 161
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 78, 45

Conread position: 460-687
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 160

Conread position: 460-688
Cow position:
Alignm length: 231
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 100

Conread position: 462-660
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 9

Conread position: 462-687
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 9

Conread position: 464-658
Cow position:
Alignm length: 195
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 464-688
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 10

Conread position: 465-687
Cow position:
Alignm length: 228
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 83, 0

Conread position: 466-657
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 466-660
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 185, 89

Conread position: 473-660
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 174

Conread position: 474-687
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 0

Conread position: 485-660
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 28

Conread position: 485-672
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 492-687
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 493-660
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 501-660
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 39, 5

Conread position: 506-660
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 27, 96

Conread position: 513-660
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 516-687
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 516-687
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 546-660
Cow position:
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 548-687
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 130, 89

Show alignments to all cow chromosomes.