Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C110032.5 |
| Conread position: | 3-206 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 181-686 |
| Cow position: | |
| Alignm length: | 513 |
| Alignm identity: | 327 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 207, 23 |
| Conread position: | 184-358 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 138 |
| Conread position: | 189-687 |
| Cow position: | |
| Alignm length: | 538 |
| Alignm identity: | 352 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 133, 13 |
| Conread position: | 197-445 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 197-456 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 197-461 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 166 |
| Conread position: | 197-652 |
| Cow position: | |
| Alignm length: | 473 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 175, 46 |
| Conread position: | 197-660 |
| Cow position: | |
| Alignm length: | 476 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 98, 20 |
| Conread position: | 197-660 |
| Cow position: | |
| Alignm length: | 478 |
| Alignm identity: | 313 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 213, 55 |
| Conread position: | 205-361 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 205-373 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 205-660 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 150, 14 |
| Conread position: | 206-619 |
| Cow position: | |
| Alignm length: | 422 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 150, 23 |
| Conread position: | 206-654 |
| Cow position: | |
| Alignm length: | 474 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 27 |
| Conread position: | 207-370 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 207-370 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-635 |
| Cow position: | |
| Alignm length: | 439 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 156 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 174 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 156 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 203, 99 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 458 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 126 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-660 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 77 |
| Conread position: | 207-671 |
| Cow position: | |
| Alignm length: | 476 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 97 |
| Conread position: | 207-672 |
| Cow position: | |
| Alignm length: | 490 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 40 |
| Conread position: | 207-687 |
| Cow position: | |
| Alignm length: | 492 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 20 |
| Conread position: | 208-457 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 208-687 |
| Cow position: | |
| Alignm length: | 493 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 27 |
| Conread position: | 208-687 |
| Cow position: | |
| Alignm length: | 491 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 161 |
| Conread position: | 209-660 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 305 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 211-687 |
| Cow position: | |
| Alignm length: | 486 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 222-660 |
| Cow position: | |
| Alignm length: | 447 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 62 |
| Conread position: | 223-595 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 272 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 102, 144 |
| Conread position: | 223-660 |
| Cow position: | |
| Alignm length: | 457 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 167 |
| Conread position: | 228-687 |
| Cow position: | |
| Alignm length: | 475 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 182, 48 |
| Conread position: | 232-687 |
| Cow position: | |
| Alignm length: | 466 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 131 |
| Conread position: | 235-665 |
| Cow position: | |
| Alignm length: | 444 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 99, 138 |
| Conread position: | 238-660 |
| Cow position: | |
| Alignm length: | 444 |
| Alignm identity: | 296 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 122, 171 |
| Conread position: | 244-690 |
| Cow position: | |
| Alignm length: | 453 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 293, 0 |
| Conread position: | 247-660 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 123, 40 |
| Conread position: | 290-660 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 261 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 137, 69 |
| Conread position: | 341-651 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 114, 17 |
| Conread position: | 372-652 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 98, 40 |
| Conread position: | 420-620 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 51 |
| Conread position: | 454-660 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 102, 44 |
| Conread position: | 459-620 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 77, 160 |
| Conread position: | 459-656 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 75, 25 |
| Conread position: | 459-658 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 459-659 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 77, 23 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 77, 12 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 459-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 88, 205 |
| Conread position: | 459-687 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 219, 19 |
| Conread position: | 460-648 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 460-660 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 15, 89 |
| Conread position: | 460-660 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 460-660 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 460-660 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 460-687 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 77, 139 |
| Conread position: | 461-660 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 461-660 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 461-687 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 462-660 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 462-660 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 81, 9 |
| Conread position: | 462-677 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 51 |
| Conread position: | 466-658 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 85, 155 |
| Conread position: | 466-660 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 81, 59 |
| Conread position: | 466-660 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 466-660 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 7 |
| Conread position: | 469-650 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 480-687 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 483-659 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 60, 159 |
| Conread position: | 484-660 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 488-687 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 492-660 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 506-660 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 511-660 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 530-660 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 535-687 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 143, 62 |
| Conread position: | 537-676 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 550-688 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 553-687 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 125, 0 |
Show alignments to all cow chromosomes.