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Cow genome map

           
Conread name:
           
Ss1.1-LyN1-MLN01C110032.5
        

               
Conread position:
               
188-644
               

               
Cow position:
               
chr3:76380634-76380186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
155, 9
               

               
Conread position:
               
196-658
               

               
Cow position:
               
chr3:57483289-57482820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 88
               

               
Conread position:
               
196-659
               

               
Cow position:
               
chr3:70888694-70889193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 400
               

               
Conread position:
               
197-455
               

               
Cow position:
               
chr3:42051170-42050901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
93, 154
               

               
Conread position:
               
197-660
               

               
Cow position:
               
chr3:6687228-6687702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
213, 28
               

               
Conread position:
               
197-660
               

               
Cow position:
               
chr3:33634686-33635146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 50
               

               
Conread position:
               
197-662
               

               
Cow position:
               
chr3:53412568-53413011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
278, 20
               

               
Conread position:
               
197-682
               

               
Cow position:
               
chr3:54291144-54290659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 264
               

               
Conread position:
               
197-686
               

               
Cow position:
               
chr3:29575686-29575185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 166
               

               
Conread position:
               
197-687
               

               
Cow position:
               
chr3:37970484-37970983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 172
               

               
Conread position:
               
204-394
               

               
Cow position:
               
chr3:67164723-67164917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 91
               

               
Conread position:
               
205-357
               

               
Cow position:
               
chr3:18943467-18943614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
205-359
               

               
Cow position:
               
chr3:52653217-52653063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
205-361
               

               
Cow position:
               
chr3:19720214-19720058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
205-657
               

               
Cow position:
               
chr3:32621595-32621142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
206-654
               

               
Cow position:
               
chr3:16076793-16077232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
243, 100
               

               
Conread position:
               
206-688
               

               
Cow position:
               
chr3:39879578-39879098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
207-370
               

               
Cow position:
               
chr3:1742779-1742941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
207-606
               

               
Cow position:
               
chr3:51857243-51856840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
201, 154
               

               
Conread position:
               
207-616
               

               
Cow position:
               
chr3:46503998-46504413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
207, 65
               

               
Conread position:
               
207-627
               

               
Cow position:
               
chr3:30617472-30617053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
147, 51
               

               
Conread position:
               
207-649
               

               
Cow position:
               
chr3:43481243-43481681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
85, 94
               

               
Conread position:
               
207-656
               

               
Cow position:
               
chr3:2870236-2870692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 156
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:3840069-3839618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 124
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:6783816-6784272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 171
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:15054272-15053808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
136, 85
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:16887446-16886995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 77
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:19799731-19799275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 156
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:19880092-19880551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 156
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:19945693-19946154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 160
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:23206426-23205968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:34029473-34029015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:40338700-40338240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 162
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:40824840-40825297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:43191844-43191384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:44925510-44925971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 162
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:49136118-49135657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:49543763-49543304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 26
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:63240796-63240333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
221, 165
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:64026687-64026230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:65208633-65209084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
203, 114
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:66889522-66889060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 156
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:68891123-68890669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 156
               

               
Conread position:
               
207-660
               

               
Cow position:
               
chr3:72631510-72631961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
88, 62
               

               
Conread position:
               
207-676
               

               
Cow position:
               
chr3:29329842-29329366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 156
               

               
Conread position:
               
207-676
               

               
Cow position:
               
chr3:46859844-46859370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
201, 36
               

               
Conread position:
               
207-686
               

               
Cow position:
               
chr3:53517057-53517541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:7157272-7156782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 157
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:7247982-7248469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 109
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:7478467-7477990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 162
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:18812946-18813436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 71
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:18860865-18861358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 156
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:19755514-19755026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:19940378-19940858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 99
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:24444653-24444166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:30315994-30316485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 77
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:34505905-34505416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 156
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:41209154-41208676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 130
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:42448563-42449043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
85, 90
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:56295633-56296122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 156
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:68698525-68698039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 141
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:69932386-69931900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:74058974-74059462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 114
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr3:78025973-78025501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
208-648
               

               
Cow position:
               
chr3:16224333-16224788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 161
               

               
Conread position:
               
208-660
               

               
Cow position:
               
chr3:23944088-23943630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
219, 35
               

               
Conread position:
               
208-660
               

               
Cow position:
               
chr3:36863009-36862549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 155
               

               
Conread position:
               
208-660
               

               
Cow position:
               
chr3:56146753-56147208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
87, 76
               

               
Conread position:
               
209-654
               

               
Cow position:
               
chr3:6876732-6876290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
181, 38
               

               
Conread position:
               
210-654
               

               
Cow position:
               
chr3:28678337-28678778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
211-641
               

               
Cow position:
               
chr3:58167127-58167558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
214, 152
               

               
Conread position:
               
211-660
               

               
Cow position:
               
chr3:58948981-58949401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
331, 84
               

               
Conread position:
               
211-660
               

               
Cow position:
               
chr3:80480288-80479848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
164, 58
               

               
Conread position:
               
212-687
               

               
Cow position:
               
chr3:21181245-21180762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 72
               

               
Conread position:
               
212-687
               

               
Cow position:
               
chr3:64652062-64652543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
219-687
               

               
Cow position:
               
chr3:58784696-58784219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 150
               

               
Conread position:
               
221-460
               

               
Cow position:
               
chr3:84197279-84197515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
221-660
               

               
Cow position:
               
chr3:4287548-4287992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 142
               

               
Conread position:
               
221-660
               

               
Cow position:
               
chr3:59863024-59863469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
222-660
               

               
Cow position:
               
chr3:2709407-2708962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
222-660
               

               
Cow position:
               
chr3:21028155-21027712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
154, 240
               

               
Conread position:
               
222-660
               

               
Cow position:
               
chr3:50916809-50917240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
205, 62
               

               
Conread position:
               
231-457
               

               
Cow position:
               
chr3:46017506-46017721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
6, 40
               

               
Conread position:
               
232-660
               

               
Cow position:
               
chr3:595599-596034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 46
               

               
Conread position:
               
232-660
               

               
Cow position:
               
chr3:10242126-10242561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
68, 52
               

               
Conread position:
               
235-660
               

               
Cow position:
               
chr3:29580085-29580514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
212, 134
               

               
Conread position:
               
235-660
               

               
Cow position:
               
chr3:38868063-38868497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
237-560
               

               
Cow position:
               
chr3:52661293-52661622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
220, 70
               

               
Conread position:
               
307-654
               

               
Cow position:
               
chr3:64823867-64824223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
75, 162
               

               
Conread position:
               
349-688
               

               
Cow position:
               
chr3:24192742-24192398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
356-655
               

               
Cow position:
               
chr3:31385346-31385054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
367-652
               

               
Cow position:
               
chr3:32704824-32704533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 5
               

               
Conread position:
               
384-660
               

               
Cow position:
               
chr3:64685493-64685195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
386-582
               

               
Cow position:
               
chr3:2367730-2367525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
386-687
               

               
Cow position:
               
chr3:28669696-28670018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
386-687
               

               
Cow position:
               
chr3:68872146-68871820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 249
               

               
Conread position:
               
397-658
               

               
Cow position:
               
chr3:71141184-71140914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
398-663
               

               
Cow position:
               
chr3:69436836-69436547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
457-658
               

               
Cow position:
               
chr3:3783443-3783648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
457-658
               

               
Cow position:
               
chr3:3787303-3787508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
457-688
               

               
Cow position:
               
chr3:56398946-56399182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
459-640
               

               
Cow position:
               
chr3:13725082-13724896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
79, 164
               

               
Conread position:
               
459-648
               

               
Cow position:
               
chr3:27920109-27920302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
459-654
               

               
Cow position:
               
chr3:44567500-44567301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
76, 89
               

               
Conread position:
               
459-654
               

               
Cow position:
               
chr3:82936005-82936204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
459-659
               

               
Cow position:
               
chr3:2853699-2853497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
459-659
               

               
Cow position:
               
chr3:3937562-3937766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 131
               

               
Conread position:
               
459-660
               

               
Cow position:
               
chr3:2508982-2508779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
459-660
               

               
Cow position:
               
chr3:5885205-5885407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
459-660
               

               
Cow position:
               
chr3:18760696-18760491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
459-660
               

               
Cow position:
               
chr3:19888958-19888758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
459-660
               

               
Cow position:
               
chr3:24644915-24645120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
459-660
               

               
Cow position:
               
chr3:29190373-29190167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
459-660
               

               
Cow position:
               
chr3:30330440-30330235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
459-660
               

               
Cow position:
               
chr3:54654485-54654690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
459-660
               

               
Cow position:
               
chr3:64813715-64813516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 97
               

               
Conread position:
               
459-660
               

               
Cow position:
               
chr3:67656916-67657117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
79, 96
               

               
Conread position:
               
459-660
               

               
Cow position:
               
chr3:72670852-72670649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
459-660
               

               
Cow position:
               
chr3:77425406-77425611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
459-660
               

               
Cow position:
               
chr3:83946661-83946866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
459-661
               

               
Cow position:
               
chr3:5952484-5952282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
459-665
               

               
Cow position:
               
chr3:54740657-54740446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
459-672
               

               
Cow position:
               
chr3:56327822-56328038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
459-687
               

               
Cow position:
               
chr3:1886724-1886489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
459-687
               

               
Cow position:
               
chr3:18113991-18113759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
79, 90
               

               
Conread position:
               
459-687
               

               
Cow position:
               
chr3:26683296-26683530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
459-687
               

               
Cow position:
               
chr3:26722884-26723112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
79, 170
               

               
Conread position:
               
459-687
               

               
Cow position:
               
chr3:27864874-27865107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
459-687
               

               
Cow position:
               
chr3:39024575-39024809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
459-687
               

               
Cow position:
               
chr3:45034696-45034937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
77, 155
               

               
Conread position:
               
459-687
               

               
Cow position:
               
chr3:64274801-64275033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 182
               

               
Conread position:
               
459-688
               

               
Cow position:
               
chr3:576377-576617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
459-688
               

               
Cow position:
               
chr3:598991-599229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
459-688
               

               
Cow position:
               
chr3:11511143-11510913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
459-688
               

               
Cow position:
               
chr3:43416706-43416933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
460-657
               

               
Cow position:
               
chr3:48844698-48844899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
460-660
               

               
Cow position:
               
chr3:36876945-36876751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
460-660
               

               
Cow position:
               
chr3:77578446-77578240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
460-687
               

               
Cow position:
               
chr3:26744155-26743922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
460-687
               

               
Cow position:
               
chr3:41081869-41082102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
460-687
               

               
Cow position:
               
chr3:57454694-57454935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
460-687
               

               
Cow position:
               
chr3:73303222-73303454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
461-665
               

               
Cow position:
               
chr3:76823393-76823602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 101
               

               
Conread position:
               
461-687
               

               
Cow position:
               
chr3:45976202-45976433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
462-648
               

               
Cow position:
               
chr3:56338249-56338059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
462-656
               

               
Cow position:
               
chr3:34875147-34875339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
163, 62
               

               
Conread position:
               
462-657
               

               
Cow position:
               
chr3:13467535-13467343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
462-660
               

               
Cow position:
               
chr3:24587848-24587649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
462-660
               

               
Cow position:
               
chr3:37643998-37644195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
68, 118
               

               
Conread position:
               
462-688
               

               
Cow position:
               
chr3:19719952-19719721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
463-640
               

               
Cow position:
               
chr3:53049125-53048945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 107
               

               
Conread position:
               
463-687
               

               
Cow position:
               
chr3:2919325-2919555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
464-660
               

               
Cow position:
               
chr3:63001907-63001705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
465-669
               

               
Cow position:
               
chr3:20382814-20383022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
466-648
               

               
Cow position:
               
chr3:7325645-7325831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
466-672
               

               
Cow position:
               
chr3:54864277-54864071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
195, 112
               

               
Conread position:
               
475-660
               

               
Cow position:
               
chr3:8241267-8241457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
476-609
               

               
Cow position:
               
chr3:14861933-14862069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
485-660
               

               
Cow position:
               
chr3:23288605-23288432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
490-676
               

               
Cow position:
               
chr3:14451694-14451883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
498-660
               

               
Cow position:
               
chr3:3982372-3982535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
498-687
               

               
Cow position:
               
chr3:48228589-48228395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
507-658
               

               
Cow position:
               
chr3:2905289-2905137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
509-687
               

               
Cow position:
               
chr3:66621963-66622147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
512-660
               

               
Cow position:
               
chr3:6663177-6663329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
530-656
               

               
Cow position:
               
chr3:60080916-60080790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
548-659
               

               
Cow position:
               
chr3:22962104-22962214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
548-688
               

               
Cow position:
               
chr3:8751148-8751286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
134, 43
               

               
Conread position:
               
549-660
               

               
Cow position:
               
chr3:45693280-45693169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
550-687
               

               
Cow position:
               
chr3:3524831-3524970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 0
               
Show alignments to all cow chromosomes.