Cow genome map

Conread name: Ss1.1-LyN1-MLN01C110032.5

Conread position: 194-660
Cow position:
Alignm length: 476
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 92

Conread position: 195-736
Cow position:
Alignm length: 586
Alignm identity: 377
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 102

Conread position: 197-647
Cow position:
Alignm length: 462
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 194

Conread position: 197-654
Cow position:
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 111

Conread position: 197-657
Cow position:
Alignm length: 476
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 274

Conread position: 197-660
Cow position:
Alignm length: 479
Alignm identity: 304
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 250, 111

Conread position: 197-682
Cow position:
Alignm length: 494
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 96

Conread position: 197-687
Cow position:
Alignm length: 506
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 130

Conread position: 197-687
Cow position:
Alignm length: 497
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 87

Conread position: 197-687
Cow position:
Alignm length: 502
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 166

Conread position: 197-687
Cow position:
Alignm length: 512
Alignm identity: 334
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 105, 87

Conread position: 197-688
Cow position:
Alignm length: 512
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 116

Conread position: 204-660
Cow position:
Alignm length: 470
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 159

Conread position: 205-655
Cow position:
Alignm length: 461
Alignm identity: 299
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 72, 12

Conread position: 205-682
Cow position:
Alignm length: 500
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 26

Conread position: 206-364
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 153, 0

Conread position: 206-687
Cow position:
Alignm length: 493
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 89

Conread position: 207-370
Cow position:
Alignm length: 164
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 207-616
Cow position:
Alignm length: 422
Alignm identity: 278
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 88, 77

Conread position: 207-657
Cow position:
Alignm length: 461
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 156

Conread position: 207-657
Cow position:
Alignm length: 470
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 99

Conread position: 207-657
Cow position:
Alignm length: 459
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 73

Conread position: 207-660
Cow position:
Alignm length: 466
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-660
Cow position:
Alignm length: 464
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 162

Conread position: 207-660
Cow position:
Alignm length: 465
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 159

Conread position: 207-660
Cow position:
Alignm length: 462
Alignm identity: 298
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 222, 32

Conread position: 207-660
Cow position:
Alignm length: 471
Alignm identity: 306
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 222, 16

Conread position: 207-660
Cow position:
Alignm length: 460
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 77

Conread position: 207-660
Cow position:
Alignm length: 465
Alignm identity: 301
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 88, 77

Conread position: 207-660
Cow position:
Alignm length: 461
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 93

Conread position: 207-660
Cow position:
Alignm length: 466
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 77

Conread position: 207-660
Cow position:
Alignm length: 466
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 166

Conread position: 207-660
Cow position:
Alignm length: 467
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 77

Conread position: 207-660
Cow position:
Alignm length: 463
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 151

Conread position: 207-660
Cow position:
Alignm length: 473
Alignm identity: 308
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 154, 163

Conread position: 207-660
Cow position:
Alignm length: 465
Alignm identity: 302
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 88, 45

Conread position: 207-660
Cow position:
Alignm length: 463
Alignm identity: 295
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 191, 153

Conread position: 207-660
Cow position:
Alignm length: 466
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-660
Cow position:
Alignm length: 466
Alignm identity: 300
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 88, 77

Conread position: 207-660
Cow position:
Alignm length: 469
Alignm identity: 302
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 154, 46

Conread position: 207-660
Cow position:
Alignm length: 467
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 77

Conread position: 207-676
Cow position:
Alignm length: 481
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 162

Conread position: 207-687
Cow position:
Alignm length: 494
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 171

Conread position: 207-687
Cow position:
Alignm length: 487
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 156

Conread position: 207-687
Cow position:
Alignm length: 497
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 171

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 156

Conread position: 207-687
Cow position:
Alignm length: 492
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 156

Conread position: 207-687
Cow position:
Alignm length: 492
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 26

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 10

Conread position: 207-687
Cow position:
Alignm length: 493
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 162

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 76

Conread position: 207-687
Cow position:
Alignm length: 496
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-687
Cow position:
Alignm length: 496
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 77

Conread position: 207-687
Cow position:
Alignm length: 496
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 87

Conread position: 207-688
Cow position:
Alignm length: 487
Alignm identity: 302
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 52, 13

Conread position: 207-702
Cow position:
Alignm length: 519
Alignm identity: 338
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 88, 77

Conread position: 208-654
Cow position:
Alignm length: 464
Alignm identity: 306
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 206, 164

Conread position: 208-658
Cow position:
Alignm length: 460
Alignm identity: 296
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 188, 29

Conread position: 208-687
Cow position:
Alignm length: 492
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 146

Conread position: 209-633
Cow position:
Alignm length: 435
Alignm identity: 282
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 220, 154

Conread position: 209-660
Cow position:
Alignm length: 466
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 75

Conread position: 209-660
Cow position:
Alignm length: 463
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 155

Conread position: 210-660
Cow position:
Alignm length: 454
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 40

Conread position: 211-660
Cow position:
Alignm length: 454
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 17

Conread position: 211-687
Cow position:
Alignm length: 494
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 73

Conread position: 222-658
Cow position:
Alignm length: 451
Alignm identity: 297
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 73, 34

Conread position: 224-660
Cow position:
Alignm length: 470
Alignm identity: 307
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 231, 97

Conread position: 231-359
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 232-660
Cow position:
Alignm length: 436
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 70

Conread position: 234-360
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 235-647
Cow position:
Alignm length: 423
Alignm identity: 276
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 163, 134

Conread position: 235-660
Cow position:
Alignm length: 435
Alignm identity: 285
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 176, 21

Conread position: 237-660
Cow position:
Alignm length: 436
Alignm identity: 285
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 206, 105

Conread position: 239-682
Cow position:
Alignm length: 454
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 122

Conread position: 241-660
Cow position:
Alignm length: 439
Alignm identity: 290
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 81, 135

Conread position: 245-445
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 260-660
Cow position:
Alignm length: 415
Alignm identity: 274
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 12, 18

Conread position: 267-675
Cow position:
Alignm length: 421
Alignm identity: 267
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 147, 87

Conread position: 338-660
Cow position:
Alignm length: 327
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 55

Conread position: 366-687
Cow position:
Alignm length: 342
Alignm identity: 228
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 207

Conread position: 384-660
Cow position:
Alignm length: 290
Alignm identity: 211
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 12, 27

Conread position: 408-651
Cow position:
Alignm length: 252
Alignm identity: 171
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 147

Conread position: 438-660
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 16

Conread position: 459-630
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 150

Conread position: 459-653
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 459-656
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 459-660
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 12

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 79, 165

Conread position: 459-660
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 459-660
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 79, 0

Conread position: 459-660
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 14, 52

Conread position: 459-686
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 78

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 76, 166

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 78, 0

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 78, 0

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 78, 0

Conread position: 459-687
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 101, 212

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 177
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 78, 0

Conread position: 459-688
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 84, 0

Conread position: 459-688
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 84, 182

Conread position: 459-688
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 81, 44

Conread position: 459-688
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 93

Conread position: 461-687
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 461-688
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 67

Conread position: 462-636
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 462-660
Cow position:
Alignm length: 203
Alignm identity: 158
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 76, 169

Conread position: 462-660
Cow position:
Alignm length: 199
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 136, 0

Conread position: 462-687
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 20

Conread position: 462-688
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 80, 13

Conread position: 462-688
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 466-660
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 466-660
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 467-680
Cow position:
Alignm length: 215
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 192, 87

Conread position: 473-687
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 483-687
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 139

Conread position: 485-658
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 92

Conread position: 485-687
Cow position:
Alignm length: 205
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 488-626
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 488-676
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 122

Conread position: 489-660
Cow position:
Alignm length: 172
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 489-688
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 70

Conread position: 498-658
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 499-687
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 14

Conread position: 519-687
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 527-645
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 535-660
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 537-687
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 141, 0

Conread position: 542-659
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 543-687
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 136, 0

Conread position: 548-657
Cow position:
Alignm length: 110
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 548-687
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 50

Conread position: 550-660
Cow position:
Alignm length: 111
Alignm identity: 93
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.