Cow genome map

Conread name: Ss1.1-LyN1-MLN01C110032.5

Conread position: 182-688
Cow position:
Alignm length: 522
Alignm identity: 330
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 161, 42

Conread position: 187-660
Cow position:
Alignm length: 481
Alignm identity: 304
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 351, 10

Conread position: 188-367
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 7

Conread position: 196-687
Cow position:
Alignm length: 507
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 167

Conread position: 197-357
Cow position:
Alignm length: 161
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 197-373
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 126

Conread position: 197-457
Cow position:
Alignm length: 264
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 17

Conread position: 197-536
Cow position:
Alignm length: 341
Alignm identity: 208
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 279, 201

Conread position: 197-590
Cow position:
Alignm length: 403
Alignm identity: 250
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 211, 166

Conread position: 197-658
Cow position:
Alignm length: 474
Alignm identity: 309
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 103, 87

Conread position: 197-660
Cow position:
Alignm length: 479
Alignm identity: 317
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 92, 75

Conread position: 197-660
Cow position:
Alignm length: 471
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 259

Conread position: 197-660
Cow position:
Alignm length: 472
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 87

Conread position: 197-687
Cow position:
Alignm length: 501
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 166

Conread position: 197-687
Cow position:
Alignm length: 500
Alignm identity: 314
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 241, 97

Conread position: 197-687
Cow position:
Alignm length: 497
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 181

Conread position: 205-553
Cow position:
Alignm length: 357
Alignm identity: 237
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 190, 129

Conread position: 205-660
Cow position:
Alignm length: 469
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 17

Conread position: 205-660
Cow position:
Alignm length: 459
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 132

Conread position: 205-688
Cow position:
Alignm length: 493
Alignm identity: 316
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 258, 137

Conread position: 206-657
Cow position:
Alignm length: 479
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 211

Conread position: 206-687
Cow position:
Alignm length: 495
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 157

Conread position: 207-355
Cow position:
Alignm length: 149
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 207-366
Cow position:
Alignm length: 160
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 207-370
Cow position:
Alignm length: 164
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 154, 0

Conread position: 207-600
Cow position:
Alignm length: 402
Alignm identity: 260
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 189, 156

Conread position: 207-651
Cow position:
Alignm length: 452
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 189

Conread position: 207-656
Cow position:
Alignm length: 462
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-660
Cow position:
Alignm length: 467
Alignm identity: 309
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 88, 77

Conread position: 207-660
Cow position:
Alignm length: 466
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 165

Conread position: 207-660
Cow position:
Alignm length: 464
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 77

Conread position: 207-660
Cow position:
Alignm length: 468
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-660
Cow position:
Alignm length: 465
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 151

Conread position: 207-660
Cow position:
Alignm length: 469
Alignm identity: 309
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 88, 77

Conread position: 207-660
Cow position:
Alignm length: 469
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 156

Conread position: 207-660
Cow position:
Alignm length: 465
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 156

Conread position: 207-660
Cow position:
Alignm length: 484
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 152

Conread position: 207-660
Cow position:
Alignm length: 463
Alignm identity: 296
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 72, 55

Conread position: 207-660
Cow position:
Alignm length: 469
Alignm identity: 306
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 93, 77

Conread position: 207-677
Cow position:
Alignm length: 483
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 154

Conread position: 207-687
Cow position:
Alignm length: 493
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 40

Conread position: 207-687
Cow position:
Alignm length: 492
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 15

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 156

Conread position: 207-687
Cow position:
Alignm length: 493
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 162

Conread position: 207-687
Cow position:
Alignm length: 498
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 131

Conread position: 207-687
Cow position:
Alignm length: 494
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 162

Conread position: 207-687
Cow position:
Alignm length: 496
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-687
Cow position:
Alignm length: 494
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 156

Conread position: 207-687
Cow position:
Alignm length: 494
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-687
Cow position:
Alignm length: 492
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-687
Cow position:
Alignm length: 496
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 77

Conread position: 207-688
Cow position:
Alignm length: 488
Alignm identity: 303
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 220, 73

Conread position: 207-688
Cow position:
Alignm length: 485
Alignm identity: 309
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 438, 153

Conread position: 209-648
Cow position:
Alignm length: 445
Alignm identity: 282
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 106, 127

Conread position: 209-660
Cow position:
Alignm length: 461
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 154

Conread position: 210-660
Cow position:
Alignm length: 462
Alignm identity: 302
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 85, 74

Conread position: 210-660
Cow position:
Alignm length: 458
Alignm identity: 294
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 13, 199

Conread position: 211-358
Cow position:
Alignm length: 148
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 211-660
Cow position:
Alignm length: 470
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 73

Conread position: 211-660
Cow position:
Alignm length: 473
Alignm identity: 319
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 75, 110

Conread position: 211-687
Cow position:
Alignm length: 493
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 73

Conread position: 212-565
Cow position:
Alignm length: 360
Alignm identity: 243
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 233, 64

Conread position: 212-660
Cow position:
Alignm length: 466
Alignm identity: 294
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 91, 264

Conread position: 213-660
Cow position:
Alignm length: 455
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 134

Conread position: 220-662
Cow position:
Alignm length: 460
Alignm identity: 299
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 54

Conread position: 221-391
Cow position:
Alignm length: 173
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 221-686
Cow position:
Alignm length: 481
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 19

Conread position: 221-688
Cow position:
Alignm length: 474
Alignm identity: 303
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 110, 78

Conread position: 232-660
Cow position:
Alignm length: 434
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 149

Conread position: 235-660
Cow position:
Alignm length: 432
Alignm identity: 279
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 61, 49

Conread position: 236-457
Cow position:
Alignm length: 223
Alignm identity: 176
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 214, 7

Conread position: 243-660
Cow position:
Alignm length: 426
Alignm identity: 280
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 41

Conread position: 243-692
Cow position:
Alignm length: 462
Alignm identity: 300
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 167, 138

Conread position: 248-676
Cow position:
Alignm length: 432
Alignm identity: 281
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 180, 20

Conread position: 262-660
Cow position:
Alignm length: 410
Alignm identity: 272
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 148, 59

Conread position: 299-660
Cow position:
Alignm length: 373
Alignm identity: 243
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 61, 82

Conread position: 383-660
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 384-660
Cow position:
Alignm length: 296
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 74, 127

Conread position: 387-690
Cow position:
Alignm length: 318
Alignm identity: 217
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 106

Conread position: 407-660
Cow position:
Alignm length: 271
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 115

Conread position: 441-657
Cow position:
Alignm length: 224
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 449-660
Cow position:
Alignm length: 215
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 452-674
Cow position:
Alignm length: 233
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 76

Conread position: 454-660
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 89, 17

Conread position: 456-688
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 33

Conread position: 457-688
Cow position:
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 459-630
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 459-648
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 89, 0

Conread position: 459-658
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 78, 0

Conread position: 459-658
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 95, 12

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 459-660
Cow position:
Alignm length: 209
Alignm identity: 163
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 17, 0

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 459-660
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 19

Conread position: 459-660
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 459-660
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 161

Conread position: 459-660
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 79, 37

Conread position: 459-660
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 143, 78

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 78, 0

Conread position: 459-660
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 459-660
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 459-663
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 85, 195

Conread position: 459-676
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 77, 36

Conread position: 459-687
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 78, 0

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 79, 90

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 0

Conread position: 459-687
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 459-687
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 459-687
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 459-687
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 89, 0

Conread position: 459-687
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 85, 64

Conread position: 459-687
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 78, 0

Conread position: 459-687
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 460-661
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 14

Conread position: 460-688
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 87

Conread position: 462-660
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 71, 179

Conread position: 466-648
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 466-654
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 31

Conread position: 466-660
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 9

Conread position: 466-660
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 468-660
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 55

Conread position: 469-660
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 15

Conread position: 473-660
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 475-688
Cow position:
Alignm length: 220
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 483-616
Cow position:
Alignm length: 134
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 488-658
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 506-687
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 536-660
Cow position:
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 546-660
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 548-660
Cow position:
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 548-688
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 555-687
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 31

Show alignments to all cow chromosomes.