Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C110032.5 |
| Conread position: | 182-688 |
| Cow position: | chr5:16102738-16102227 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 330 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 161, 42 |
| Conread position: | 187-660 |
| Cow position: | chr5:49487824-49488291 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 351, 10 |
| Conread position: | 188-367 |
| Cow position: | chr5:28333151-28332973 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 196-687 |
| Cow position: | chr5:2975133-2975632 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 167 |
| Conread position: | 197-357 |
| Cow position: | chr5:2459327-2459486 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 197-373 |
| Cow position: | chr5:24104123-24103947 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 126 |
| Conread position: | 197-457 |
| Cow position: | chr5:52435081-52435337 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 108, 17 |
| Conread position: | 197-536 |
| Cow position: | chr5:12681707-12681369 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 279, 201 |
| Conread position: | 197-590 |
| Cow position: | chr5:27197953-27198348 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 211, 166 |
| Conread position: | 197-658 |
| Cow position: | chr5:3787281-3787749 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 309 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 103, 87 |
| Conread position: | 197-660 |
| Cow position: | chr5:10855473-10855006 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 317 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 92, 75 |
| Conread position: | 197-660 |
| Cow position: | chr5:18274096-18274562 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 259 |
| Conread position: | 197-660 |
| Cow position: | chr5:55629331-55629797 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 87 |
| Conread position: | 197-687 |
| Cow position: | chr5:12731371-12730876 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 166 |
| Conread position: | 197-687 |
| Cow position: | chr5:23830976-23830486 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 241, 97 |
| Conread position: | 197-687 |
| Cow position: | chr5:51744619-51745108 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 181 |
| Conread position: | 205-553 |
| Cow position: | chr5:40789409-40789756 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 190, 129 |
| Conread position: | 205-660 |
| Cow position: | chr5:18400344-18399892 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 17 |
| Conread position: | 205-660 |
| Cow position: | chr5:43988454-43988878 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 132 |
| Conread position: | 205-688 |
| Cow position: | chr5:48533310-48533788 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 258, 137 |
| Conread position: | 206-657 |
| Cow position: | chr5:50947982-50948458 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 211 |
| Conread position: | 206-687 |
| Cow position: | chr5:10774910-10774421 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 157 |
| Conread position: | 207-355 |
| Cow position: | chr5:46808657-46808805 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-366 |
| Cow position: | chr5:31122233-31122074 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-370 |
| Cow position: | chr5:41376500-41376338 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 207-600 |
| Cow position: | chr5:987714-987314 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 189, 156 |
| Conread position: | 207-651 |
| Cow position: | chr5:3965803-3966248 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 189 |
| Conread position: | 207-656 |
| Cow position: | chr5:18121128-18120672 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 156 |
| Conread position: | 207-660 |
| Cow position: | chr5:2915788-2916243 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 309 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-660 |
| Cow position: | chr5:3502753-3502292 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 165 |
| Conread position: | 207-660 |
| Cow position: | chr5:6153544-6153083 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-660 |
| Cow position: | chr5:6587234-6586773 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 156 |
| Conread position: | 207-660 |
| Cow position: | chr5:10842027-10841567 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 151 |
| Conread position: | 207-660 |
| Cow position: | chr5:10920192-10920650 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 309 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-660 |
| Cow position: | chr5:32774119-32774584 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 156 |
| Conread position: | 207-660 |
| Cow position: | chr5:37378480-37378940 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 156 |
| Conread position: | 207-660 |
| Cow position: | chr5:45701663-45702134 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 152 |
| Conread position: | 207-660 |
| Cow position: | chr5:54620398-54620852 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 296 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 72, 55 |
| Conread position: | 207-660 |
| Cow position: | chr5:76096406-76096868 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 93, 77 |
| Conread position: | 207-677 |
| Cow position: | chr5:23958976-23958499 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 154 |
| Conread position: | 207-687 |
| Cow position: | chr5:307059-306571 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 40 |
| Conread position: | 207-687 |
| Cow position: | chr5:4684450-4683963 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 15 |
| Conread position: | 207-687 |
| Cow position: | chr5:5104569-5105057 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 156 |
| Conread position: | 207-687 |
| Cow position: | chr5:10813396-10812907 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 162 |
| Conread position: | 207-687 |
| Cow position: | chr5:26077839-26077347 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 131 |
| Conread position: | 207-687 |
| Cow position: | chr5:31707917-31708404 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 162 |
| Conread position: | 207-687 |
| Cow position: | chr5:40131248-40130756 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 156 |
| Conread position: | 207-687 |
| Cow position: | chr5:46777747-46778236 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 156 |
| Conread position: | 207-687 |
| Cow position: | chr5:58197370-58197860 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 156 |
| Conread position: | 207-687 |
| Cow position: | chr5:59061990-59062478 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 156 |
| Conread position: | 207-687 |
| Cow position: | chr5:64780660-64780170 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 77 |
| Conread position: | 207-688 |
| Cow position: | chr5:5666231-5665757 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 220, 73 |
| Conread position: | 207-688 |
| Cow position: | chr5:18885177-18884715 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 309 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 438, 153 |
| Conread position: | 209-648 |
| Cow position: | chr5:43193066-43192634 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 106, 127 |
| Conread position: | 209-660 |
| Cow position: | chr5:4756827-4756369 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 154 |
| Conread position: | 210-660 |
| Cow position: | chr5:4070573-4071027 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 302 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 85, 74 |
| Conread position: | 210-660 |
| Cow position: | chr5:4386582-4387035 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 294 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 13, 199 |
| Conread position: | 211-358 |
| Cow position: | chr5:13046997-13047144 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-660 |
| Cow position: | chr5:24100007-24100456 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 73 |
| Conread position: | 211-660 |
| Cow position: | chr5:40758277-40758731 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 319 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 75, 110 |
| Conread position: | 211-687 |
| Cow position: | chr5:37733707-37734193 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 73 |
| Conread position: | 212-565 |
| Cow position: | chr5:11115414-11115068 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 233, 64 |
| Conread position: | 212-660 |
| Cow position: | chr5:24152126-24152585 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 91, 264 |
| Conread position: | 213-660 |
| Cow position: | chr5:54860614-54860173 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 134 |
| Conread position: | 220-662 |
| Cow position: | chr5:3424724-3425177 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 221-391 |
| Cow position: | chr5:62823854-62824026 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 221-686 |
| Cow position: | chr5:50870976-50871450 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 19 |
| Conread position: | 221-688 |
| Cow position: | chr5:14783998-14783549 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 110, 78 |
| Conread position: | 232-660 |
| Cow position: | chr5:12642056-12641633 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 149 |
| Conread position: | 235-660 |
| Cow position: | chr5:24295993-24296415 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 61, 49 |
| Conread position: | 236-457 |
| Cow position: | chr5:34298284-34298496 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 214, 7 |
| Conread position: | 243-660 |
| Cow position: | chr5:18560015-18559596 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 280 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 52, 41 |
| Conread position: | 243-692 |
| Cow position: | chr5:58191372-58190914 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 300 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 167, 138 |
| Conread position: | 248-676 |
| Cow position: | chr5:29434366-29433944 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 180, 20 |
| Conread position: | 262-660 |
| Cow position: | chr5:40923265-40922866 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 299-660 |
| Cow position: | chr5:58549467-58549834 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 383-660 |
| Cow position: | chr5:49130728-49131023 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 384-660 |
| Cow position: | chr5:34904141-34904434 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 74, 127 |
| Conread position: | 387-690 |
| Cow position: | chr5:66495820-66496131 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 15, 106 |
| Conread position: | 407-660 |
| Cow position: | chr5:33188161-33188427 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 115 |
| Conread position: | 441-657 |
| Cow position: | chr5:59144952-59145175 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 449-660 |
| Cow position: | chr5:3822487-3822701 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 452-674 |
| Cow position: | chr5:46646588-46646818 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 454-660 |
| Cow position: | chr5:30580940-30581148 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 456-688 |
| Cow position: | chr5:40348677-40348444 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 86, 33 |
| Conread position: | 457-688 |
| Cow position: | chr5:24103871-24103635 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 459-630 |
| Cow position: | chr5:34298519-34298694 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-648 |
| Cow position: | chr5:55993839-55993646 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 459-658 |
| Cow position: | chr5:5894642-5894845 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-658 |
| Cow position: | chr5:31642911-31642711 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 459-660 |
| Cow position: | chr5:1340318-1340113 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 459-660 |
| Cow position: | chr5:4017605-4017397 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 459-660 |
| Cow position: | chr5:7275438-7275643 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | chr5:29767703-29767912 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 459-660 |
| Cow position: | chr5:32777183-32776971 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | chr5:32952697-32952901 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 161 |
| Conread position: | 459-660 |
| Cow position: | chr5:41955789-41955583 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 37 |
| Conread position: | 459-660 |
| Cow position: | chr5:41960033-41959833 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 143, 78 |
| Conread position: | 459-660 |
| Cow position: | chr5:46791453-46791658 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-660 |
| Cow position: | chr5:59084540-59084336 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | chr5:73487450-73487245 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 459-663 |
| Cow position: | chr5:14344123-14343916 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 85, 195 |
| Conread position: | 459-676 |
| Cow position: | chr5:28014616-28014834 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 77, 36 |
| Conread position: | 459-687 |
| Cow position: | chr5:5926360-5926125 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-687 |
| Cow position: | chr5:31327143-31327376 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 79, 90 |
| Conread position: | 459-687 |
| Cow position: | chr5:41065897-41065663 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-687 |
| Cow position: | chr5:42506355-42506589 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-687 |
| Cow position: | chr5:46004268-46004035 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 459-687 |
| Cow position: | chr5:46665606-46665841 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-687 |
| Cow position: | chr5:46736985-46736750 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-687 |
| Cow position: | chr5:49118729-49118497 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 459-687 |
| Cow position: | chr5:49520320-49520550 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 85, 64 |
| Conread position: | 459-687 |
| Cow position: | chr5:50505242-50505479 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-687 |
| Cow position: | chr5:54787512-54787279 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 460-661 |
| Cow position: | chr5:49757100-49756896 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 460-688 |
| Cow position: | chr5:48545011-48545243 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 87 |
| Conread position: | 462-660 |
| Cow position: | chr5:59283914-59284115 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 71, 179 |
| Conread position: | 466-648 |
| Cow position: | chr5:48226948-48226761 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 466-654 |
| Cow position: | chr5:62383420-62383605 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 31 |
| Conread position: | 466-660 |
| Cow position: | chr5:29670575-29670777 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 466-660 |
| Cow position: | chr5:46669544-46669744 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 468-660 |
| Cow position: | chr5:47079924-47080120 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 73, 55 |
| Conread position: | 469-660 |
| Cow position: | chr5:28024323-28024516 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 15 |
| Conread position: | 473-660 |
| Cow position: | chr5:34698283-34698470 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 475-688 |
| Cow position: | chr5:41896918-41896699 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 483-616 |
| Cow position: | chr5:57948524-57948657 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 488-658 |
| Cow position: | chr5:16057769-16057593 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 506-687 |
| Cow position: | chr5:48806788-48806601 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 536-660 |
| Cow position: | chr5:65325027-65325151 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 546-660 |
| Cow position: | chr5:14657791-14657678 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 548-660 |
| Cow position: | chr5:52435473-52435585 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 548-688 |
| Cow position: | chr5:26097817-26097959 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 555-687 |
| Cow position: | chr5:41527078-41526947 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 124, 31 |
Show alignments to all cow chromosomes.