Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C110032.5 |
| Conread position: | 184-455 |
| Cow position: | chr6:15966349-15966084 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 119, 16 |
| Conread position: | 197-563 |
| Cow position: | chr6:15478652-15479025 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 211, 163 |
| Conread position: | 197-655 |
| Cow position: | chr6:24240886-24241347 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 87 |
| Conread position: | 197-657 |
| Cow position: | chr6:35418824-35418355 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 221 |
| Conread position: | 197-660 |
| Cow position: | chr6:51731562-51732027 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 87 |
| Conread position: | 197-661 |
| Cow position: | chr6:31199325-31199797 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 82, 23 |
| Conread position: | 197-687 |
| Cow position: | chr6:2877202-2876704 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 166 |
| Conread position: | 197-687 |
| Cow position: | chr6:45587433-45587914 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 29 |
| Conread position: | 198-658 |
| Cow position: | chr6:59502850-59503311 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 23 |
| Conread position: | 200-364 |
| Cow position: | chr6:17243815-17243653 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 9, 71 |
| Conread position: | 204-660 |
| Cow position: | chr6:69144053-69144521 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 111 |
| Conread position: | 206-370 |
| Cow position: | chr6:28475210-28475374 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 206-460 |
| Cow position: | chr6:39333382-39333143 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 78 |
| Conread position: | 206-652 |
| Cow position: | chr6:15926063-15925626 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 13 |
| Conread position: | 207-356 |
| Cow position: | chr6:47047689-47047540 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-358 |
| Cow position: | chr6:47625553-47625704 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-367 |
| Cow position: | chr6:40379139-40378977 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 207-600 |
| Cow position: | chr6:50112-49718 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 88, 15 |
| Conread position: | 207-651 |
| Cow position: | chr6:28490077-28489628 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 114 |
| Conread position: | 207-655 |
| Cow position: | chr6:44261988-44261536 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 316 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 252, 114 |
| Conread position: | 207-656 |
| Cow position: | chr6:57471159-57471607 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 135 |
| Conread position: | 207-658 |
| Cow position: | chr6:238355-237903 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 300 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 123, 154 |
| Conread position: | 207-658 |
| Cow position: | chr6:3572086-3572543 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 298 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 201, 151 |
| Conread position: | 207-658 |
| Cow position: | chr6:40553089-40552633 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 304 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 88, 65 |
| Conread position: | 207-660 |
| Cow position: | chr6:1381848-1381394 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 298 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 253, 135 |
| Conread position: | 207-660 |
| Cow position: | chr6:3150726-3151179 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 157 |
| Conread position: | 207-660 |
| Cow position: | chr6:8759806-8759341 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 77 |
| Conread position: | 207-660 |
| Cow position: | chr6:11723707-11723251 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 307 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-660 |
| Cow position: | chr6:21835705-21835249 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 299 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 203, 154 |
| Conread position: | 207-660 |
| Cow position: | chr6:28170399-28170858 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 253 |
| Conread position: | 207-660 |
| Cow position: | chr6:30273402-30272945 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 305 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-660 |
| Cow position: | chr6:35875219-35874765 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 77 |
| Conread position: | 207-660 |
| Cow position: | chr6:36528689-36529146 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 77 |
| Conread position: | 207-660 |
| Cow position: | chr6:40326910-40327369 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 156 |
| Conread position: | 207-660 |
| Cow position: | chr6:41228935-41229395 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 63 |
| Conread position: | 207-660 |
| Cow position: | chr6:64717811-64718269 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-660 |
| Cow position: | chr6:66233291-66233751 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 76 |
| Conread position: | 207-660 |
| Cow position: | chr6:66546968-66547419 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 194, 10 |
| Conread position: | 207-687 |
| Cow position: | chr6:329972-329485 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 77 |
| Conread position: | 207-687 |
| Cow position: | chr6:1821135-1820648 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 322 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 203, 108 |
| Conread position: | 207-687 |
| Cow position: | chr6:5749416-5749905 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 156 |
| Conread position: | 207-687 |
| Cow position: | chr6:7139849-7139360 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 156 |
| Conread position: | 207-687 |
| Cow position: | chr6:8203681-8204167 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-687 |
| Cow position: | chr6:12664829-12664341 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 156 |
| Conread position: | 207-687 |
| Cow position: | chr6:13309887-13309406 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 156 |
| Conread position: | 207-687 |
| Cow position: | chr6:13848561-13849050 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 324 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 203, 5 |
| Conread position: | 207-687 |
| Cow position: | chr6:14390420-14390909 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 162 |
| Conread position: | 207-687 |
| Cow position: | chr6:16591453-16591935 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 40 |
| Conread position: | 207-687 |
| Cow position: | chr6:17596804-17596315 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 156 |
| Conread position: | 207-687 |
| Cow position: | chr6:26669370-26668882 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 43 |
| Conread position: | 207-687 |
| Cow position: | chr6:27171072-27171559 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 76 |
| Conread position: | 207-687 |
| Cow position: | chr6:27528526-27528040 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 207-687 |
| Cow position: | chr6:28703218-28702730 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 156 |
| Conread position: | 207-687 |
| Cow position: | chr6:39910825-39911309 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 43 |
| Conread position: | 207-687 |
| Cow position: | chr6:40276574-40277064 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 114 |
| Conread position: | 207-687 |
| Cow position: | chr6:43619215-43619711 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 156 |
| Conread position: | 207-687 |
| Cow position: | chr6:44149056-44148570 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 7 |
| Conread position: | 207-687 |
| Cow position: | chr6:51716024-51716524 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 329 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 207-687 |
| Cow position: | chr6:65843107-65843587 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 307 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 206, 235 |
| Conread position: | 208-660 |
| Cow position: | chr6:27375430-27374976 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 208 |
| Conread position: | 208-687 |
| Cow position: | chr6:59617585-59618061 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 84 |
| Conread position: | 209-658 |
| Cow position: | chr6:52694520-52694977 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 307 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 75 |
| Conread position: | 210-660 |
| Cow position: | chr6:477033-477493 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 305 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 103, 74 |
| Conread position: | 210-660 |
| Cow position: | chr6:3888021-3887565 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 295 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 151, 62 |
| Conread position: | 210-687 |
| Cow position: | chr6:703706-704192 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 159 |
| Conread position: | 210-687 |
| Cow position: | chr6:34890631-34890150 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 211-444 |
| Cow position: | chr6:48579536-48579302 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 149, 26 |
| Conread position: | 211-660 |
| Cow position: | chr6:12627198-12627649 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 200, 65 |
| Conread position: | 211-687 |
| Cow position: | chr6:915126-915614 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 323 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 85, 73 |
| Conread position: | 212-660 |
| Cow position: | chr6:15139677-15139222 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 295 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 198, 157 |
| Conread position: | 213-657 |
| Cow position: | chr6:27473927-27474375 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 222-657 |
| Cow position: | chr6:3275637-3275197 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 62 |
| Conread position: | 222-687 |
| Cow position: | chr6:17047847-17048290 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 310 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 74, 62 |
| Conread position: | 223-688 |
| Cow position: | chr6:10633050-10633504 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 44 |
| Conread position: | 227-660 |
| Cow position: | chr6:16672819-16673247 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 171, 36 |
| Conread position: | 231-460 |
| Cow position: | chr6:7193656-7193440 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 232-620 |
| Cow position: | chr6:39374829-39375202 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 208, 56 |
| Conread position: | 235-660 |
| Cow position: | chr6:5948262-5947833 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 290 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 20, 51 |
| Conread position: | 235-660 |
| Cow position: | chr6:26777647-26777224 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 277 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 175, 24 |
| Conread position: | 240-688 |
| Cow position: | chr6:16628206-16628644 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 281 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 20, 121 |
| Conread position: | 241-660 |
| Cow position: | chr6:64791019-64791427 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 87 |
| Conread position: | 259-660 |
| Cow position: | chr6:25360832-25361255 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 261-687 |
| Cow position: | chr6:33982043-33982486 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 123, 34 |
| Conread position: | 262-660 |
| Cow position: | chr6:28187291-28186887 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 267 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 167, 65 |
| Conread position: | 372-677 |
| Cow position: | chr6:2580058-2580383 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 378-660 |
| Cow position: | chr6:65876972-65876701 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 384-657 |
| Cow position: | chr6:21974320-21974608 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 72, 159 |
| Conread position: | 385-660 |
| Cow position: | chr6:10680063-10680356 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 178 |
| Conread position: | 388-647 |
| Cow position: | chr6:10338991-10338714 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 57, 149 |
| Conread position: | 459-636 |
| Cow position: | chr6:67213528-67213354 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 459-656 |
| Cow position: | chr6:60513793-60513994 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 459-658 |
| Cow position: | chr6:63705890-63705689 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 16, 94 |
| Conread position: | 459-660 |
| Cow position: | chr6:43791836-43791630 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 55, 46 |
| Conread position: | 459-660 |
| Cow position: | chr6:46296034-46296239 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-660 |
| Cow position: | chr6:47132093-47132298 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-660 |
| Cow position: | chr6:53543843-53544052 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-660 |
| Cow position: | chr6:59594649-59594850 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 459-660 |
| Cow position: | chr6:62578452-62578247 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-660 |
| Cow position: | chr6:65907042-65906839 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 459-687 |
| Cow position: | chr6:2376451-2376680 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 219, 96 |
| Conread position: | 459-687 |
| Cow position: | chr6:2556387-2556621 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-687 |
| Cow position: | chr6:13978497-13978731 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-687 |
| Cow position: | chr6:16051510-16051276 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-687 |
| Cow position: | chr6:18513300-18513534 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-687 |
| Cow position: | chr6:20352351-20352117 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 459-687 |
| Cow position: | chr6:25216049-25216279 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 459-687 |
| Cow position: | chr6:28642792-28642558 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-687 |
| Cow position: | chr6:43431612-43431378 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 459-687 |
| Cow position: | chr6:50718418-50718652 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 459-687 |
| Cow position: | chr6:68028893-68029129 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 460-658 |
| Cow position: | chr6:19016947-19017149 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 460-660 |
| Cow position: | chr6:12405695-12405494 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 87, 11 |
| Conread position: | 460-660 |
| Cow position: | chr6:51878584-51878782 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 78, 96 |
| Conread position: | 460-660 |
| Cow position: | chr6:62663464-62663664 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 72, 59 |
| Conread position: | 460-678 |
| Cow position: | chr6:11165074-11164858 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 82, 114 |
| Conread position: | 460-687 |
| Cow position: | chr6:47041444-47041211 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 461-656 |
| Cow position: | chr6:40128200-40128399 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 12, 84 |
| Conread position: | 461-660 |
| Cow position: | chr6:11269698-11269501 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 83, 51 |
| Conread position: | 461-660 |
| Cow position: | chr6:15641485-15641284 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 83, 13 |
| Conread position: | 462-660 |
| Cow position: | chr6:14081299-14081502 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 462-660 |
| Cow position: | chr6:39023111-39022912 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 462-688 |
| Cow position: | chr6:4509326-4509558 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 462-688 |
| Cow position: | chr6:17243552-17243317 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 464-654 |
| Cow position: | chr6:44412376-44412194 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 465-658 |
| Cow position: | chr6:65939798-65939603 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 42 |
| Conread position: | 466-631 |
| Cow position: | chr6:18985832-18986000 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 71, 101 |
| Conread position: | 466-658 |
| Cow position: | chr6:7835222-7835417 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 65, 86 |
| Conread position: | 466-687 |
| Cow position: | chr6:25791941-25791718 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 77, 18 |
| Conread position: | 481-657 |
| Cow position: | chr6:35472469-35472288 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 483-616 |
| Cow position: | chr6:58603265-58603398 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 15 |
| Conread position: | 483-683 |
| Cow position: | chr6:7192789-7192598 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 484-658 |
| Cow position: | chr6:50487040-50486857 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 484-688 |
| Cow position: | chr6:35722928-35723135 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 492-676 |
| Cow position: | chr6:44002469-44002658 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 493-660 |
| Cow position: | chr6:53671861-53672030 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 45, 117 |
| Conread position: | 510-653 |
| Cow position: | chr6:38207093-38207240 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 515-660 |
| Cow position: | chr6:3486597-3486452 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 535-656 |
| Cow position: | chr6:34029084-34029202 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 535-660 |
| Cow position: | chr6:39332723-39332601 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 535-687 |
| Cow position: | chr6:21890076-21890230 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 536-660 |
| Cow position: | chr6:20558122-20557998 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 541-650 |
| Cow position: | chr6:24625782-24625673 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 547-660 |
| Cow position: | chr6:38874824-38874711 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 548-660 |
| Cow position: | chr6:55540400-55540288 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-660 |
| Cow position: | chr6:51148731-51148834 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 558-660 |
| Cow position: | chr6:44018984-44018882 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 567-687 |
| Cow position: | chr6:66388982-66388860 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
Show alignments to all cow chromosomes.