Cow genome map

Conread name: Ss1.1-LyN1-MLN01C110032.5

Conread position: 165-688
Cow position:
Alignm length: 539
Alignm identity: 344
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 15

Conread position: 196-690
Cow position:
Alignm length: 508
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 23

Conread position: 197-370
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 164, 0

Conread position: 197-660
Cow position:
Alignm length: 471
Alignm identity: 299
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 134, 124

Conread position: 197-660
Cow position:
Alignm length: 476
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 172

Conread position: 197-660
Cow position:
Alignm length: 464
Alignm identity: 296
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 110, 0

Conread position: 197-660
Cow position:
Alignm length: 482
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 139

Conread position: 197-687
Cow position:
Alignm length: 501
Alignm identity: 322
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 230, 97

Conread position: 197-687
Cow position:
Alignm length: 501
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 166

Conread position: 197-687
Cow position:
Alignm length: 500
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 181

Conread position: 197-690
Cow position:
Alignm length: 506
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 50

Conread position: 200-660
Cow position:
Alignm length: 472
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 84

Conread position: 204-592
Cow position:
Alignm length: 414
Alignm identity: 279
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 202, 32

Conread position: 204-660
Cow position:
Alignm length: 466
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 69

Conread position: 205-357
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 205-455
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 71, 140

Conread position: 205-661
Cow position:
Alignm length: 477
Alignm identity: 310
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 97, 68

Conread position: 207-366
Cow position:
Alignm length: 160
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 207-370
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 154, 0

Conread position: 207-370
Cow position:
Alignm length: 164
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 154, 0

Conread position: 207-370
Cow position:
Alignm length: 164
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 154, 0

Conread position: 207-370
Cow position:
Alignm length: 164
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 207-657
Cow position:
Alignm length: 463
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 156

Conread position: 207-659
Cow position:
Alignm length: 463
Alignm identity: 303
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 93, 77

Conread position: 207-660
Cow position:
Alignm length: 466
Alignm identity: 302
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 88, 77

Conread position: 207-660
Cow position:
Alignm length: 478
Alignm identity: 307
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 175, 47

Conread position: 207-660
Cow position:
Alignm length: 464
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 99

Conread position: 207-660
Cow position:
Alignm length: 466
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 58

Conread position: 207-660
Cow position:
Alignm length: 459
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 162

Conread position: 207-660
Cow position:
Alignm length: 462
Alignm identity: 301
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 77

Conread position: 207-660
Cow position:
Alignm length: 475
Alignm identity: 312
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 156, 332

Conread position: 207-660
Cow position:
Alignm length: 462
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 56

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 11

Conread position: 207-687
Cow position:
Alignm length: 499
Alignm identity: 318
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 204, 156

Conread position: 207-687
Cow position:
Alignm length: 497
Alignm identity: 323
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 82, 77

Conread position: 207-687
Cow position:
Alignm length: 494
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 237

Conread position: 207-687
Cow position:
Alignm length: 494
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-687
Cow position:
Alignm length: 497
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 77

Conread position: 207-687
Cow position:
Alignm length: 492
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 77

Conread position: 207-687
Cow position:
Alignm length: 493
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 173

Conread position: 207-687
Cow position:
Alignm length: 494
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-687
Cow position:
Alignm length: 495
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 158

Conread position: 207-687
Cow position:
Alignm length: 496
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 26

Conread position: 207-687
Cow position:
Alignm length: 498
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 254

Conread position: 207-687
Cow position:
Alignm length: 496
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 77

Conread position: 207-687
Cow position:
Alignm length: 491
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 11

Conread position: 207-688
Cow position:
Alignm length: 492
Alignm identity: 317
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 118, 135

Conread position: 208-677
Cow position:
Alignm length: 482
Alignm identity: 316
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 206, 144

Conread position: 208-690
Cow position:
Alignm length: 491
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 184

Conread position: 209-654
Cow position:
Alignm length: 455
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 163

Conread position: 210-536
Cow position:
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 97

Conread position: 210-660
Cow position:
Alignm length: 457
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 67

Conread position: 211-366
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 211-596
Cow position:
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 25

Conread position: 211-660
Cow position:
Alignm length: 463
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 61

Conread position: 211-660
Cow position:
Alignm length: 459
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 73

Conread position: 213-658
Cow position:
Alignm length: 456
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 71

Conread position: 223-660
Cow position:
Alignm length: 446
Alignm identity: 295
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 72, 61

Conread position: 227-454
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 232-687
Cow position:
Alignm length: 468
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 131

Conread position: 236-660
Cow position:
Alignm length: 442
Alignm identity: 304
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 217, 105

Conread position: 239-460
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 104, 84

Conread position: 243-660
Cow position:
Alignm length: 425
Alignm identity: 267
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 204, 117

Conread position: 243-660
Cow position:
Alignm length: 429
Alignm identity: 279
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 162, 120

Conread position: 243-687
Cow position:
Alignm length: 459
Alignm identity: 290
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 52, 41

Conread position: 256-658
Cow position:
Alignm length: 407
Alignm identity: 257
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 168, 40

Conread position: 257-582
Cow position:
Alignm length: 343
Alignm identity: 232
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 202, 106

Conread position: 258-660
Cow position:
Alignm length: 415
Alignm identity: 275
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 152, 105

Conread position: 259-660
Cow position:
Alignm length: 412
Alignm identity: 272
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 170, 110

Conread position: 286-687
Cow position:
Alignm length: 416
Alignm identity: 260
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 164, 77

Conread position: 293-660
Cow position:
Alignm length: 381
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 132

Conread position: 359-660
Cow position:
Alignm length: 312
Alignm identity: 208
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 16, 71

Conread position: 359-660
Cow position:
Alignm length: 314
Alignm identity: 219
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 34

Conread position: 365-688
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 368-660
Cow position:
Alignm length: 316
Alignm identity: 225
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 90, 38

Conread position: 372-690
Cow position:
Alignm length: 340
Alignm identity: 236
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 87, 151

Conread position: 384-669
Cow position:
Alignm length: 308
Alignm identity: 215
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 74, 0

Conread position: 388-677
Cow position:
Alignm length: 303
Alignm identity: 200
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 72

Conread position: 398-660
Cow position:
Alignm length: 276
Alignm identity: 182
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 169

Conread position: 457-660
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 459-637
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 459-645
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 459-651
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 36

Conread position: 459-654
Cow position:
Alignm length: 196
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 459-660
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 89, 164

Conread position: 459-660
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 459-660
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 88, 0

Conread position: 459-660
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 459-660
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 459-660
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 48

Conread position: 459-683
Cow position:
Alignm length: 230
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 79, 114

Conread position: 459-687
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 78, 0

Conread position: 459-687
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 79, 183

Conread position: 459-687
Cow position:
Alignm length: 235
Alignm identity: 169
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 84, 12

Conread position: 459-687
Cow position:
Alignm length: 237
Alignm identity: 182
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 36, 90

Conread position: 460-687
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 35

Conread position: 460-687
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 0

Conread position: 461-660
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 195

Conread position: 461-676
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 462-660
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 462-660
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 465-659
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 30

Conread position: 466-657
Cow position:
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 88

Conread position: 466-660
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 42

Conread position: 483-687
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 56, 5

Conread position: 490-687
Cow position:
Alignm length: 208
Alignm identity: 156
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 493-660
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 16

Conread position: 508-660
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 510-687
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 515-660
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 515-688
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 516-660
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 7

Conread position: 520-660
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 76

Conread position: 532-661
Cow position:
Alignm length: 130
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 547-660
Cow position:
Alignm length: 114
Alignm identity: 98
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 548-660
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 548-660
Cow position:
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 556-660
Cow position:
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.