Cow genome map

Conread name: Ss1.1-LyN1-MLN01C110032.5

Conread position: 160-660
Cow position: chrX:39763869-39764371 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 326
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 40

Conread position: 193-687
Cow position: chrX:3467334-3466830 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 171

Conread position: 194-687
Cow position: chrX:18658493-18657991 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 169

Conread position: 197-627
Cow position: chrX:39562634-39562198 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 172

Conread position: 197-633
Cow position: chrX:23525041-23524604 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 274
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 148, 105

Conread position: 197-660
Cow position: chrX:1784883-1785351 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 305
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 169, 59

Conread position: 197-660
Cow position: chrX:4412176-4412645 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 308
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 192, 13

Conread position: 197-660
Cow position: chrX:15178116-15177648 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 133

Conread position: 197-660
Cow position: chrX:22617887-22617410 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 311
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 145, 152

Conread position: 197-660
Cow position: chrX:30182610-30182143 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 309
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 98, 87

Conread position: 197-660
Cow position: chrX:31199876-31200345 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 301
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 99, 25

Conread position: 197-678
Cow position: chrX:28521287-28520790 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 325
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 207, 172

Conread position: 197-687
Cow position: chrX:6281465-6280970 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 197-687
Cow position: chrX:7753224-7753716 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 7

Conread position: 197-687
Cow position: chrX:9093961-9094459 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 73

Conread position: 197-687
Cow position: chrX:11463729-11463230 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 166

Conread position: 197-687
Cow position: chrX:21580803-21581303 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 87

Conread position: 197-687
Cow position: chrX:35531173-35531672 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 166

Conread position: 198-359
Cow position: chrX:20798620-20798783 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 11, 98

Conread position: 200-688
Cow position: chrX:19875825-19876323 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 161

Conread position: 204-652
Cow position: chrX:41887670-41887211 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 112

Conread position: 204-660
Cow position: chrX:41849890-41849441 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 290
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 192, 122

Conread position: 205-376
Cow position: chrX:4752301-4752130 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 157

Conread position: 205-455
Cow position: chrX:24111442-24111204 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 205-468
Cow position: chrX:10414813-10414564 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 258, 73

Conread position: 205-688
Cow position: chrX:31510945-31511436 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 25

Conread position: 207-370
Cow position: chrX:18452309-18452472 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 207-370
Cow position: chrX:27084300-27084463 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 207-370
Cow position: chrX:37015444-37015606 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 154, 0

Conread position: 207-370
Cow position: chrX:37850459-37850621 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 154, 0

Conread position: 207-398
Cow position: chrX:2977764-2977572 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 158, 0

Conread position: 207-450
Cow position: chrX:22127814-22127584 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 207-460
Cow position: chrX:21491487-21491723 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 134, 0

Conread position: 207-558
Cow position: chrX:29172438-29172081 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 127, 137

Conread position: 207-573
Cow position: chrX:27496038-27496413 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 242
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 201, 191

Conread position: 207-601
Cow position: chrX:37957727-37957326 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 264
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 222, 162

Conread position: 207-612
Cow position: chrX:13913760-13914159 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 252
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 204, 52

Conread position: 207-616
Cow position: chrX:26765869-26765453 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 274
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 72, 63

Conread position: 207-626
Cow position: chrX:20333233-20332806 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 282
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 82, 157

Conread position: 207-631
Cow position: chrX:23328476-23328050 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 287
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 255, 153

Conread position: 207-632
Cow position: chrX:27424994-27424562 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-635
Cow position: chrX:18952350-18951914 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 286
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 88, 77

Conread position: 207-648
Cow position: chrX:26757303-26756859 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 312
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 252, 114

Conread position: 207-658
Cow position: chrX:21268724-21268284 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 289
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 220, 85

Conread position: 207-658
Cow position: chrX:23454691-23454233 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 77

Conread position: 207-658
Cow position: chrX:27986503-27986044 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 239

Conread position: 207-658
Cow position: chrX:33715368-33714917 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 290
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 134, 100

Conread position: 207-660
Cow position: chrX:3083809-3083349 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 308
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 203, 26

Conread position: 207-660
Cow position: chrX:5282452-5281997 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 12

Conread position: 207-660
Cow position: chrX:5296229-5295765 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 26

Conread position: 207-660
Cow position: chrX:5356497-5356036 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 298
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 88, 65

Conread position: 207-660
Cow position: chrX:8589495-8589972 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 316
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 84, 168

Conread position: 207-660
Cow position: chrX:9009667-9010124 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 298
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 194, 139

Conread position: 207-660
Cow position: chrX:11148006-11147545 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 157

Conread position: 207-660
Cow position: chrX:12344269-12344724 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-660
Cow position: chrX:12653178-12652718 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 157

Conread position: 207-660
Cow position: chrX:14596175-14596632 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 153

Conread position: 207-660
Cow position: chrX:15979629-15979162 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 136

Conread position: 207-660
Cow position: chrX:16684508-16684048 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 156

Conread position: 207-660
Cow position: chrX:16848557-16848106 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 303
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 25, 10

Conread position: 207-660
Cow position: chrX:17052873-17053339 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 190

Conread position: 207-660
Cow position: chrX:21830840-21831295 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 77

Conread position: 207-660
Cow position: chrX:24324237-24323777 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-660
Cow position: chrX:24771534-24771072 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 156

Conread position: 207-660
Cow position: chrX:27592658-27592201 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 63

Conread position: 207-660
Cow position: chrX:28505941-28505481 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 156

Conread position: 207-660
Cow position: chrX:29910099-29909638 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 156

Conread position: 207-660
Cow position: chrX:30068513-30068059 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 5

Conread position: 207-660
Cow position: chrX:30170522-30170070 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 59

Conread position: 207-660
Cow position: chrX:32123384-32123844 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 298
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 53

Conread position: 207-687
Cow position: chrX:673879-673390 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 156

Conread position: 207-687
Cow position: chrX:1942038-1941547 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 156

Conread position: 207-687
Cow position: chrX:2577752-2578239 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 93

Conread position: 207-687
Cow position: chrX:2815155-2814667 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-687
Cow position: chrX:2858049-2857561 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-687
Cow position: chrX:3374581-3374092 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 257

Conread position: 207-687
Cow position: chrX:3419883-3419408 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 114

Conread position: 207-687
Cow position: chrX:5322399-5321911 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 21

Conread position: 207-687
Cow position: chrX:5393519-5393030 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-687
Cow position: chrX:7094796-7095284 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-687
Cow position: chrX:12481325-12481812 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 305
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 63

Conread position: 207-687
Cow position: chrX:14460837-14461320 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 93

Conread position: 207-687
Cow position: chrX:14784144-14783663 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 114

Conread position: 207-687
Cow position: chrX:15623176-15622680 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 322
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 222, 156

Conread position: 207-687
Cow position: chrX:16276977-16277464 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 171

Conread position: 207-687
Cow position: chrX:16361792-16361304 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 154

Conread position: 207-687
Cow position: chrX:17477097-17476603 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 243

Conread position: 207-687
Cow position: chrX:18220752-18221234 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 156

Conread position: 207-687
Cow position: chrX:20035072-20034585 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 93

Conread position: 207-687
Cow position: chrX:21341730-21342224 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 325
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 129, 163

Conread position: 207-687
Cow position: chrX:21753110-21752620 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 27

Conread position: 207-687
Cow position: chrX:23278351-23278840 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 77

Conread position: 207-687
Cow position: chrX:26398798-26398309 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-687
Cow position: chrX:27979490-27979003 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 317
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 88, 77

Conread position: 207-687
Cow position: chrX:28586309-28586797 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-687
Cow position: chrX:28757316-28756821 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-687
Cow position: chrX:29095998-29095509 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 156

Conread position: 207-687
Cow position: chrX:29935927-29936415 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 73

Conread position: 207-687
Cow position: chrX:30436172-30436661 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 162

Conread position: 207-687
Cow position: chrX:32065840-32065352 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 156

Conread position: 207-687
Cow position: chrX:38148922-38149408 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 45

Conread position: 207-690
Cow position: chrX:6871747-6871261 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 99

Conread position: 208-660
Cow position: chrX:2561531-2561068 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 159

Conread position: 208-660
Cow position: chrX:12184269-12184730 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 308
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 202, 170

Conread position: 208-687
Cow position: chrX:15041215-15040733 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 330
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 87, 64

Conread position: 208-688
Cow position: chrX:13055148-13055601 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 135

Conread position: 209-519
Cow position: chrX:6249221-6248921 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 200, 145

Conread position: 209-660
Cow position: chrX:13181234-13180759 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 162

Conread position: 210-658
Cow position: chrX:2144301-2144753 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 292
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 180, 37

Conread position: 210-660
Cow position: chrX:43073086-43073542 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 299
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 152, 20

Conread position: 211-660
Cow position: chrX:1548311-1548765 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 159

Conread position: 211-660
Cow position: chrX:29949271-29948829 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 292
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 216, 57

Conread position: 211-687
Cow position: chrX:2481300-2480816 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 315
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 84, 68

Conread position: 212-683
Cow position: chrX:28867917-28867434 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 49

Conread position: 221-619
Cow position: chrX:29886329-29886739 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 266
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 168, 95

Conread position: 222-660
Cow position: chrX:30230762-30230326 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 48

Conread position: 223-660
Cow position: chrX:23389191-23388748 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 291
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 73, 43

Conread position: 227-455
Cow position: chrX:41102125-41101903 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 228-687
Cow position: chrX:21643562-21643096 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 126

Conread position: 231-687
Cow position: chrX:21791966-21792432 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 138

Conread position: 235-660
Cow position: chrX:45376637-45376202 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 287
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 89, 162

Conread position: 235-677
Cow position: chrX:10530433-10529986 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 92

Conread position: 235-687
Cow position: chrX:13411772-13411315 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 49

Conread position: 235-689
Cow position: chrX:2380865-2381320 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 324
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 202, 88

Conread position: 242-660
Cow position: chrX:11817478-11817071 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 272
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 199, 118

Conread position: 255-662
Cow position: chrX:19869385-19869769 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 275
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 194, 66

Conread position: 257-688
Cow position: chrX:47395878-47395431 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 63

Conread position: 265-664
Cow position: chrX:21507782-21507376 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 270
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 164, 104

Conread position: 270-631
Cow position: chrX:3142110-3142469 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 235
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 131, 90

Conread position: 303-592
Cow position: chrX:36725040-36724763 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 159, 23

Conread position: 359-688
Cow position: chrX:5678839-5678504 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 62

Conread position: 360-660
Cow position: chrX:35385755-35385455 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 86

Conread position: 385-660
Cow position: chrX:21590793-21591087 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 70, 232

Conread position: 386-660
Cow position: chrX:25322069-25321803 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 454-645
Cow position: chrX:16709551-16709743 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 7

Conread position: 454-647
Cow position: chrX:16701270-16701463 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 7

Conread position: 454-660
Cow position: chrX:20724544-20724754 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 0

Conread position: 456-651
Cow position: chrX:32327738-32327937 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 161

Conread position: 457-687
Cow position: chrX:27123985-27124221 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 80, 0

Conread position: 459-657
Cow position: chrX:18768620-18768818 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 97

Conread position: 459-658
Cow position: chrX:22489739-22489951 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 47

Conread position: 459-658
Cow position: chrX:30834101-30834302 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 79, 37

Conread position: 459-660
Cow position: chrX:322048-322250 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 84, 12

Conread position: 459-660
Cow position: chrX:4752030-4751823 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 88, 64

Conread position: 459-660
Cow position: chrX:5600927-5600721 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 0

Conread position: 459-660
Cow position: chrX:9126664-9126869 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 459-660
Cow position: chrX:10414553-10414353 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 84

Conread position: 459-660
Cow position: chrX:15262040-15261828 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 76, 0

Conread position: 459-660
Cow position: chrX:16780865-16781069 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 76, 184

Conread position: 459-660
Cow position: chrX:16810308-16810103 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 76, 0

Conread position: 459-660
Cow position: chrX:17666215-17666011 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 174

Conread position: 459-660
Cow position: chrX:22127550-22127345 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 86, 185

Conread position: 459-660
Cow position: chrX:24614067-24613869 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 24

Conread position: 459-660
Cow position: chrX:29098016-29098221 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 0

Conread position: 459-660
Cow position: chrX:30058758-30058968 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 79, 57

Conread position: 459-660
Cow position: chrX:39696365-39696565 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 459-669
Cow position: chrX:22566112-22565898 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 78, 0

Conread position: 459-676
Cow position: chrX:20760313-20760098 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 47

Conread position: 459-684
Cow position: chrX:19229435-19229206 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 84, 15

Conread position: 459-687
Cow position: chrX:7032036-7032272 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 459-687
Cow position: chrX:13930150-13929917 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 0

Conread position: 459-687
Cow position: chrX:15123566-15123341 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 202, 77

Conread position: 459-687
Cow position: chrX:18535982-18536215 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 79, 0

Conread position: 459-687
Cow position: chrX:27316861-27317089 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 219, 68

Conread position: 459-687
Cow position: chrX:28560306-28560060 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 87

Conread position: 459-687
Cow position: chrX:30168496-30168259 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 79, 0

Conread position: 459-687
Cow position: chrX:34094251-34094017 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 78, 0

Conread position: 459-688
Cow position: chrX:12021598-12021821 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 30, 25

Conread position: 459-688
Cow position: chrX:20134562-20134328 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 194

Conread position: 459-700
Cow position: chrX:21731194-21730953 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 88, 26

Conread position: 459-705
Cow position: chrX:17525133-17524893 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 25

Conread position: 459-720
Cow position: chrX:24445485-24445217 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 76, 261

Conread position: 460-637
Cow position: chrX:2046600-2046780 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 78, 89

Conread position: 460-657
Cow position: chrX:23216409-23216613 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 14, 49

Conread position: 460-660
Cow position: chrX:10385838-10386038 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 30

Conread position: 460-660
Cow position: chrX:21225055-21225259 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 75, 0

Conread position: 460-660
Cow position: chrX:23020879-23021088 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 79, 0

Conread position: 460-687
Cow position: chrX:24446645-24446412 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 460-687
Cow position: chrX:37813730-37813962 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 78, 0

Conread position: 461-660
Cow position: chrX:26432996-26433198 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 77, 87

Conread position: 461-660
Cow position: chrX:31376938-31377135 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 95

Conread position: 461-660
Cow position: chrX:33536154-33536358 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 461-687
Cow position: chrX:5669124-5668900 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 203, 52

Conread position: 461-687
Cow position: chrX:8481032-8481265 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 76, 88

Conread position: 461-687
Cow position: chrX:47384727-47384497 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 87, 134

Conread position: 462-660
Cow position: chrX:29852131-29851931 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 80, 9

Conread position: 462-660
Cow position: chrX:36838297-36838498 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 88, 0

Conread position: 464-659
Cow position: chrX:4743426-4743227 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 35

Conread position: 466-660
Cow position: chrX:26529623-26529819 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 70, 159

Conread position: 467-660
Cow position: chrX:29764419-29764612 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 97

Conread position: 468-660
Cow position: chrX:38123323-38123519 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 482-652
Cow position: chrX:25017760-25017588 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 23

Conread position: 482-687
Cow position: chrX:37850747-37850956 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 6

Conread position: 482-688
Cow position: chrX:35026612-35026819 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 112

Conread position: 484-658
Cow position: chrX:34007390-34007568 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 487-687
Cow position: chrX:26443159-26443366 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 496-687
Cow position: chrX:8962206-8962014 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 182, 122

Conread position: 498-651
Cow position: chrX:36547149-36546991 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 40, 0

Conread position: 498-665
Cow position: chrX:35021891-35022066 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 502-687
Cow position: chrX:19397395-19397587 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 507-660
Cow position: chrX:6237184-6237034 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 507-682
Cow position: chrX:42547310-42547131 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 29, 90

Conread position: 511-660
Cow position: chrX:20798951-20799098 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 121, 50

Conread position: 516-687
Cow position: chrX:28625974-28625801 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 162, 0

Conread position: 521-652
Cow position: chrX:6248524-6248392 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 82

Conread position: 535-660
Cow position: chrX:21766281-21766405 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 535-660
Cow position: chrX:22809554-22809679 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 535-660
Cow position: chrX:30200732-30200607 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 535-687
Cow position: chrX:12358537-12358693 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 536-687
Cow position: chrX:13072792-13072639 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 9

Conread position: 536-687
Cow position: chrX:13093353-13093200 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 9

Conread position: 548-656
Cow position: chrX:5359681-5359789 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 548-687
Cow position: chrX:12313671-12313534 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 130, 18

Conread position: 555-687
Cow position: chrX:16463865-16463999 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 123, 0

Show alignments to all cow chromosomes.