Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01D040093.5 |
| Conread position: | 236-424 |
| Cow position: | chr13:46206184-46206372 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 928-1525 |
| Cow position: | chr13:22124755-22125351 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 367 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 194, 10 |
| Conread position: | 930-1463 |
| Cow position: | chr13:39930642-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 128 |
| Conread position: | 932-1492 |
| Cow position: | chr13:24162483-24163046 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 349 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 190, 298 |
| Conread position: | 932-1494 |
| Cow position: | chr13:56333712-56334286 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 344 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 932-1523 |
| Cow position: | chr13:22124925-22125519 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 295 |
| Conread position: | 932-1523 |
| Cow position: | chr13:22125009-22125603 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 82 |
| Conread position: | 932-1523 |
| Cow position: | chr13:24162651-24163245 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 295 |
| Conread position: | 932-1523 |
| Cow position: | chr13:24162735-24163329 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 82 |
| Conread position: | 932-1523 |
| Cow position: | chr13:39983980-39984574 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 358 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 934-1523 |
| Cow position: | chr13:39984234-39984826 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 294 |
| Conread position: | 935-1474 |
| Cow position: | chr13:39984149-39984693 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 333 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 110 |
| Conread position: | 950-1312 |
| Cow position: | chr13:24163257-24163622 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 172, 283 |
| Conread position: | 950-1523 |
| Cow position: | chr13:22124691-22125267 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 351 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 172, 396 |
| Conread position: | 950-1523 |
| Cow position: | chr13:24162417-24162993 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 342 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 172, 204 |
| Conread position: | 956-1505 |
| Cow position: | chr13:22124865-22125417 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 226 |
| Conread position: | 956-1505 |
| Cow position: | chr13:24162591-24163143 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 241 |
| Conread position: | 956-1521 |
| Cow position: | chr13:39930584-39931152 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 102 |
| Conread position: | 956-1523 |
| Cow position: | chr13:22125201-22125771 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 341 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 169, 246 |
| Conread position: | 956-1523 |
| Cow position: | chr13:24162927-24163497 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 341 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 169, 246 |
| Conread position: | 958-1506 |
| Cow position: | chr13:39984342-39984893 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 86 |
| Conread position: | 963-1523 |
| Cow position: | chr13:39983927-39984490 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 337 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 74, 81 |
| Conread position: | 1041-1523 |
| Cow position: | chr13:39930585-39931070 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1124-1506 |
| Cow position: | chr13:56292172-56291792 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 1162-1524 |
| Cow position: | chr13:56333693-56334055 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1193-1515 |
| Cow position: | chr13:56292187-56291868 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 47, 31 |
| Conread position: | 1199-1525 |
| Cow position: | chr13:56333646-56333972 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 48, 29 |
Show alignments to all cow chromosomes.