Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01D040093.5 |
| Conread position: | 235-509 |
| Cow position: | chr24:17010413-17010687 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 235-512 |
| Cow position: | chr24:17062914-17063191 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 240-512 |
| Cow position: | chr24:17081829-17081557 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-497 |
| Cow position: | chr24:16984942-16985137 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 161 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 930-1270 |
| Cow position: | chr24:17077846-17077503 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 194, 306 |
| Conread position: | 930-1516 |
| Cow position: | chr24:17035711-17035122 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 300 |
| Conread position: | 930-1523 |
| Cow position: | chr24:17036299-17035703 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 175 |
| Conread position: | 930-1523 |
| Cow position: | chr24:17078350-17077754 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 300 |
| Conread position: | 932-1185 |
| Cow position: | chr24:17013245-17013501 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 932-1352 |
| Cow position: | chr24:17070624-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 274 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 191, 296 |
| Conread position: | 932-1431 |
| Cow position: | chr24:17070540-17071042 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 932-1438 |
| Cow position: | chr24:17035457-17034948 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 932-1452 |
| Cow position: | chr24:17035541-17035018 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 298 |
| Conread position: | 932-1521 |
| Cow position: | chr24:17036045-17035453 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 214 |
| Conread position: | 932-1522 |
| Cow position: | chr24:17078264-17077671 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 932-1523 |
| Cow position: | chr24:17035625-17035031 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 305 |
| Conread position: | 932-1523 |
| Cow position: | chr24:17035793-17035199 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 298 |
| Conread position: | 932-1523 |
| Cow position: | chr24:17036129-17035535 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 169 |
| Conread position: | 932-1523 |
| Cow position: | chr24:17036213-17035619 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 298 |
| Conread position: | 932-1523 |
| Cow position: | chr24:17036381-17035787 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 298 |
| Conread position: | 932-1525 |
| Cow position: | chr24:17078096-17077500 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 173 |
| Conread position: | 933-1285 |
| Cow position: | chr24:17013162-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 188, 292 |
| Conread position: | 935-1523 |
| Cow position: | chr24:17036546-17035955 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 175 |
| Conread position: | 956-1515 |
| Cow position: | chr24:17070480-17071042 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 154 |
| Conread position: | 959-1512 |
| Cow position: | chr24:17078153-17077597 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 271 |
| Conread position: | 985-1515 |
| Cow position: | chr24:17070424-17070958 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 249 |
| Conread position: | 1003-1311 |
| Cow position: | chr24:17013148-17013459 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1040-1523 |
| Cow position: | chr24:17070398-17070882 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 12 |
| Conread position: | 1124-1440 |
| Cow position: | chr24:17013188-17013504 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 212 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1193-1526 |
| Cow position: | chr24:17070468-17070801 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 138, 132 |
| Conread position: | 1199-1521 |
| Cow position: | chr24:17013179-17013501 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 1251-1521 |
| Cow position: | chr24:17036563-17036293 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 1266-1515 |
| Cow position: | chr24:17013162-17013411 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.