Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01D040093.5 |
| Conread position: | 31-512 |
| Cow position: | chr25:33142603-33143092 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 107 |
| Conread position: | 206-447 |
| Cow position: | chr25:34467655-34467897 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 233-500 |
| Cow position: | chr25:34745102-34744835 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 236-418 |
| Cow position: | chr25:361390-361572 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 236-462 |
| Cow position: | chr25:339490-339716 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 236-484 |
| Cow position: | chr25:3673396-3673644 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 236-485 |
| Cow position: | chr25:33122297-33122546 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 236-488 |
| Cow position: | chr25:421945-422197 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 197, 185 |
| Conread position: | 236-489 |
| Cow position: | chr25:3639864-3639611 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 236-512 |
| Cow position: | chr25:22223928-22224204 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 255, 262 |
| Conread position: | 242-489 |
| Cow position: | chr25:4663659-4663412 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 247-512 |
| Cow position: | chr25:321865-322130 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 259 |
| Conread position: | 248-503 |
| Cow position: | chr25:431793-431550 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 254-459 |
| Cow position: | chr25:34751286-34751491 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 510-701 |
| Cow position: | chr25:33143378-33143572 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 700-1929 |
| Cow position: | chr25:33144614-33145848 (view UCSC Genome Browser custom track) |
| Alignm length: | 1240 |
| Alignm identity: | 1047 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 939, 897 |
| Conread position: | 899-1249 |
| Cow position: | chr25:366689-367042 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 138, 143 |
| Conread position: | 920-1356 |
| Cow position: | chr25:34732623-34732184 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 201, 279 |
| Conread position: | 927-1523 |
| Cow position: | chr25:33157565-33156966 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 930-1225 |
| Cow position: | chr25:22235992-22236290 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 121, 126 |
| Conread position: | 930-1270 |
| Cow position: | chr25:33127881-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 930-1272 |
| Cow position: | chr25:36801622-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 194, 235 |
| Conread position: | 930-1345 |
| Cow position: | chr25:346443-346861 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 107, 114 |
| Conread position: | 930-1356 |
| Cow position: | chr25:34447437-34447857 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 53 |
| Conread position: | 930-1412 |
| Cow position: | chr25:33305323-33304844 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 228, 5 |
| Conread position: | 930-1424 |
| Cow position: | chr25:23420378-23420875 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 312 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 194, 237 |
| Conread position: | 930-1523 |
| Cow position: | chr25:33298642-33299238 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 297 |
| Conread position: | 930-1523 |
| Cow position: | chr25:33298726-33299322 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 930-1523 |
| Cow position: | chr25:33299230-33299826 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 54 |
| Conread position: | 930-1523 |
| Cow position: | chr25:34770045-34769449 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 171 |
| Conread position: | 930-1523 |
| Cow position: | chr25:36800710-36801306 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 305 |
| Conread position: | 930-1526 |
| Cow position: | chr25:33298978-33299577 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 311 |
| Conread position: | 930-1531 |
| Cow position: | chr25:326660-327270 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 317 |
| Conread position: | 931-1386 |
| Cow position: | chr25:33299399-33299853 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 293 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 931-1401 |
| Cow position: | chr25:34473589-34474057 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 95, 7 |
| Conread position: | 931-1522 |
| Cow position: | chr25:33530056-33530651 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 343 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 6, 133 |
| Conread position: | 931-1523 |
| Cow position: | chr25:36801215-36801798 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 119 |
| Conread position: | 931-1523 |
| Cow position: | chr25:36801371-36801966 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 361 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 193, 297 |
| Conread position: | 932-1242 |
| Cow position: | chr25:34734012-34733699 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 120, 124 |
| Conread position: | 932-1329 |
| Cow position: | chr25:22235910-22236305 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 190, 291 |
| Conread position: | 932-1354 |
| Cow position: | chr25:33127799-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 300 |
| Conread position: | 932-1430 |
| Cow position: | chr25:34763243-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 128 |
| Conread position: | 932-1473 |
| Cow position: | chr25:33157392-33156848 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 932-1474 |
| Cow position: | chr25:25652353-25652898 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 502 |
| Conread position: | 932-1494 |
| Cow position: | chr25:34769791-34769227 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 305 |
| Conread position: | 932-1506 |
| Cow position: | chr25:34447187-34447757 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 305 |
| Conread position: | 932-1507 |
| Cow position: | chr25:25652269-25652847 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 932-1513 |
| Cow position: | chr25:25652437-25653021 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 311 |
| Conread position: | 932-1518 |
| Cow position: | chr25:3664012-3664601 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 350 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 120, 126 |
| Conread position: | 932-1523 |
| Cow position: | chr25:25652689-25653283 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 126 |
| Conread position: | 932-1523 |
| Cow position: | chr25:34732443-34731849 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 355 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 122, 134 |
| Conread position: | 932-1523 |
| Cow position: | chr25:34769959-34769365 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 303 |
| Conread position: | 932-1524 |
| Cow position: | chr25:33157308-33156714 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 298 |
| Conread position: | 932-1525 |
| Cow position: | chr25:34762910-34763500 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 128 |
| Conread position: | 933-1305 |
| Cow position: | chr25:414698-414326 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 192, 237 |
| Conread position: | 934-1356 |
| Cow position: | chr25:36801542-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 187, 231 |
| Conread position: | 934-1513 |
| Cow position: | chr25:34762828-34763407 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 291 |
| Conread position: | 934-1514 |
| Cow position: | chr25:34447021-34447604 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 296 |
| Conread position: | 935-1468 |
| Cow position: | chr25:36800799-36801335 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 935-1474 |
| Cow position: | chr25:34447106-34447648 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 306 |
| Conread position: | 935-1523 |
| Cow position: | chr25:25652188-25652779 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 123 |
| Conread position: | 935-1523 |
| Cow position: | chr25:33298479-33299070 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 80 |
| Conread position: | 936-1525 |
| Cow position: | chr25:34446937-34447531 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 944-1513 |
| Cow position: | chr25:3663940-3664512 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 345 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 179, 196 |
| Conread position: | 945-1275 |
| Cow position: | chr25:4657455-4657122 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 176, 296 |
| Conread position: | 945-1424 |
| Cow position: | chr25:326339-326821 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 104, 124 |
| Conread position: | 945-1431 |
| Cow position: | chr25:33127728-33128217 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 285 |
| Conread position: | 950-1401 |
| Cow position: | chr25:22235844-22236298 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 277 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 103, 111 |
| Conread position: | 950-1523 |
| Cow position: | chr25:33157458-33156882 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 363 |
| Conread position: | 954-1446 |
| Cow position: | chr25:34473526-34474018 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 98, 112 |
| Conread position: | 955-1347 |
| Cow position: | chr25:34473695-34474088 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 97, 103 |
| Conread position: | 955-1390 |
| Cow position: | chr25:33305944-33305512 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 168, 104 |
| Conread position: | 955-1473 |
| Cow position: | chr25:23420319-23420840 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 955-1523 |
| Cow position: | chr25:34770104-34769533 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 28 |
| Conread position: | 955-1523 |
| Cow position: | chr25:36800651-36801222 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 275 |
| Conread position: | 956-1521 |
| Cow position: | chr25:33306277-33305715 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 348 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 168, 89 |
| Conread position: | 962-1526 |
| Cow position: | chr25:33127661-33128228 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 980-1523 |
| Cow position: | chr25:34770163-34769617 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 257 |
| Conread position: | 982-1523 |
| Cow position: | chr25:36801338-36801882 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 991-1430 |
| Cow position: | chr25:36801515-36801957 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 130, 356 |
| Conread position: | 997-1525 |
| Cow position: | chr25:34713928-34714459 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 124, 348 |
| Conread position: | 998-1521 |
| Cow position: | chr25:33305421-33304900 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 333 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 998-1523 |
| Cow position: | chr25:34763141-34763666 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 329 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 54, 60 |
| Conread position: | 1019-1523 |
| Cow position: | chr25:25652188-25652695 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 1020-1491 |
| Cow position: | chr25:326330-326804 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 298 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 96, 155 |
| Conread position: | 1020-1492 |
| Cow position: | chr25:3663932-3664407 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 295 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 105, 204 |
| Conread position: | 1021-1443 |
| Cow position: | chr25:4657463-4657038 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 100, 291 |
| Conread position: | 1021-1523 |
| Cow position: | chr25:34473509-34474011 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 314 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 101, 161 |
| Conread position: | 1025-1522 |
| Cow position: | chr25:3636556-3636056 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 100, 209 |
| Conread position: | 1118-1515 |
| Cow position: | chr25:23420403-23420798 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 114, 9 |
| Conread position: | 1119-1513 |
| Cow position: | chr25:3676011-3676405 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 198, 193 |
| Conread position: | 1119-1514 |
| Cow position: | chr25:34714137-34714532 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 376, 362 |
| Conread position: | 1122-1523 |
| Cow position: | chr25:34713804-34714205 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 102, 111 |
| Conread position: | 1123-1525 |
| Cow position: | chr25:326352-326754 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 142, 111 |
| Conread position: | 1124-1517 |
| Cow position: | chr25:34732584-34732191 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 102, 114 |
| Conread position: | 1124-1523 |
| Cow position: | chr25:23420323-23420722 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 114 |
| Conread position: | 1127-1428 |
| Cow position: | chr25:366753-367053 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 112, 9 |
| Conread position: | 1127-1513 |
| Cow position: | chr25:346476-346861 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 90, 9 |
| Conread position: | 1130-1523 |
| Cow position: | chr25:33305372-33304983 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 179, 54 |
| Conread position: | 1135-1513 |
| Cow position: | chr25:34446889-34447267 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 31, 41 |
| Conread position: | 1137-1523 |
| Cow position: | chr25:34770171-34769785 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 105, 97 |
| Conread position: | 1161-1472 |
| Cow position: | chr25:18642194-18641879 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 125, 175 |
| Conread position: | 1162-1474 |
| Cow position: | chr25:22235891-22236203 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 122, 118 |
| Conread position: | 1163-1513 |
| Cow position: | chr25:22235976-22236326 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 37, 33 |
| Conread position: | 1169-1523 |
| Cow position: | chr25:22235811-22236168 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 161 |
| Conread position: | 1177-1523 |
| Cow position: | chr25:34732615-34732269 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 57, 50 |
| Conread position: | 1182-1506 |
| Cow position: | chr25:34732106-34731782 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 42 |
| Conread position: | 1183-1506 |
| Cow position: | chr25:366724-367047 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1190-1437 |
| Cow position: | chr25:427335-427582 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 1190-1522 |
| Cow position: | chr25:346454-346786 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1190-1525 |
| Cow position: | chr25:33298569-33298904 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1197-1517 |
| Cow position: | chr25:3663944-3664264 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 41 |
| Conread position: | 1198-1525 |
| Cow position: | chr25:34733995-34733670 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 1205-1474 |
| Cow position: | chr25:414675-414408 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 111, 118 |
| Conread position: | 1205-1521 |
| Cow position: | chr25:23420320-23420636 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 1205-1523 |
| Cow position: | chr25:4657444-4657126 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 33 |
| Conread position: | 1237-1525 |
| Cow position: | chr25:34762882-34763167 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 223, 233 |
| Conread position: | 1244-1522 |
| Cow position: | chr25:3676052-3676330 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 60 |
| Conread position: | 1247-1523 |
| Cow position: | chr25:33305421-33305148 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1259-1523 |
| Cow position: | chr25:414781-414525 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1261-1524 |
| Cow position: | chr25:34732615-34732352 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 221, 214 |
| Conread position: | 1262-1523 |
| Cow position: | chr25:36844626-36844365 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1264-1523 |
| Cow position: | chr25:34446934-34447193 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1264-1523 |
| Cow position: | chr25:34762825-34763084 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1267-1523 |
| Cow position: | chr25:366724-366980 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1269-1517 |
| Cow position: | chr25:427330-427579 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 1269-1523 |
| Cow position: | chr25:33306461-33306211 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 65 |
| Conread position: | 1289-1523 |
| Cow position: | chr25:23420320-23420554 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 38 |
Show alignments to all cow chromosomes.