Cow genome map

Conread name: Ss1.1-LyN1-MLN01D040093.5

Conread position: 31-512
Cow position:
Alignm length: 493
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 107

Conread position: 206-447
Cow position:
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 233-500
Cow position:
Alignm length: 268
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 236-418
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 236-462
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 236-484
Cow position:
Alignm length: 249
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 236-485
Cow position:
Alignm length: 250
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 236-488
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 197, 185

Conread position: 236-489
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 56, 44

Conread position: 236-512
Cow position:
Alignm length: 278
Alignm identity: 191
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 255, 262

Conread position: 242-489
Cow position:
Alignm length: 248
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 247-512
Cow position:
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 259

Conread position: 248-503
Cow position:
Alignm length: 256
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 254-459
Cow position:
Alignm length: 206
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 510-701
Cow position:
Alignm length: 195
Alignm identity: 153
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 700-1929
Cow position:
Alignm length: 1240
Alignm identity: 1047
Alignm E-value: 0
Alignm gaps (pig, cow): 939, 897

Conread position: 899-1249
Cow position:
Alignm length: 357
Alignm identity: 219
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 138, 143

Conread position: 920-1356
Cow position:
Alignm length: 443
Alignm identity: 276
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 201, 279

Conread position: 927-1523
Cow position:
Alignm length: 607
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 45

Conread position: 930-1225
Cow position:
Alignm length: 302
Alignm identity: 192
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 121, 126

Conread position: 930-1270
Cow position:
Alignm length: 344
Alignm identity: 225
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 193, 0

Conread position: 930-1272
Cow position:
Alignm length: 348
Alignm identity: 224
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 194, 235

Conread position: 930-1345
Cow position:
Alignm length: 422
Alignm identity: 255
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 114

Conread position: 930-1356
Cow position:
Alignm length: 432
Alignm identity: 266
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 53

Conread position: 930-1412
Cow position:
Alignm length: 488
Alignm identity: 300
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 228, 5

Conread position: 930-1424
Cow position:
Alignm length: 501
Alignm identity: 312
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 194, 237

Conread position: 930-1523
Cow position:
Alignm length: 599
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 297

Conread position: 930-1523
Cow position:
Alignm length: 599
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 60

Conread position: 930-1523
Cow position:
Alignm length: 600
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 54

Conread position: 930-1523
Cow position:
Alignm length: 601
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 171

Conread position: 930-1523
Cow position:
Alignm length: 600
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 305

Conread position: 930-1526
Cow position:
Alignm length: 602
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 311

Conread position: 930-1531
Cow position:
Alignm length: 613
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 317

Conread position: 931-1386
Cow position:
Alignm length: 461
Alignm identity: 293
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 43, 53

Conread position: 931-1401
Cow position:
Alignm length: 477
Alignm identity: 288
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 95, 7

Conread position: 931-1522
Cow position:
Alignm length: 599
Alignm identity: 343
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 6, 133

Conread position: 931-1523
Cow position:
Alignm length: 597
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 119

Conread position: 931-1523
Cow position:
Alignm length: 598
Alignm identity: 361
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 193, 297

Conread position: 932-1242
Cow position:
Alignm length: 317
Alignm identity: 199
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 124

Conread position: 932-1329
Cow position:
Alignm length: 403
Alignm identity: 249
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 190, 291

Conread position: 932-1354
Cow position:
Alignm length: 427
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 300

Conread position: 932-1430
Cow position:
Alignm length: 503
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 128

Conread position: 932-1473
Cow position:
Alignm length: 545
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 0

Conread position: 932-1474
Cow position:
Alignm length: 547
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 502

Conread position: 932-1494
Cow position:
Alignm length: 567
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 305

Conread position: 932-1506
Cow position:
Alignm length: 580
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 305

Conread position: 932-1507
Cow position:
Alignm length: 579
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 932-1513
Cow position:
Alignm length: 588
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 311

Conread position: 932-1518
Cow position:
Alignm length: 593
Alignm identity: 350
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 120, 126

Conread position: 932-1523
Cow position:
Alignm length: 597
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 126

Conread position: 932-1523
Cow position:
Alignm length: 602
Alignm identity: 355
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 134

Conread position: 932-1523
Cow position:
Alignm length: 597
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 303

Conread position: 932-1524
Cow position:
Alignm length: 599
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 298

Conread position: 932-1525
Cow position:
Alignm length: 595
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 128

Conread position: 933-1305
Cow position:
Alignm length: 379
Alignm identity: 234
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 192, 237

Conread position: 934-1356
Cow position:
Alignm length: 429
Alignm identity: 272
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 187, 231

Conread position: 934-1513
Cow position:
Alignm length: 583
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 291

Conread position: 934-1514
Cow position:
Alignm length: 587
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 296

Conread position: 935-1468
Cow position:
Alignm length: 539
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 55

Conread position: 935-1474
Cow position:
Alignm length: 545
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 306

Conread position: 935-1523
Cow position:
Alignm length: 595
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 123

Conread position: 935-1523
Cow position:
Alignm length: 596
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 80

Conread position: 936-1525
Cow position:
Alignm length: 596
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 110

Conread position: 944-1513
Cow position:
Alignm length: 575
Alignm identity: 345
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 179, 196

Conread position: 945-1275
Cow position:
Alignm length: 335
Alignm identity: 207
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 176, 296

Conread position: 945-1424
Cow position:
Alignm length: 486
Alignm identity: 301
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 104, 124

Conread position: 945-1431
Cow position:
Alignm length: 493
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 285

Conread position: 950-1401
Cow position:
Alignm length: 457
Alignm identity: 277
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 103, 111

Conread position: 950-1523
Cow position:
Alignm length: 578
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 363

Conread position: 954-1446
Cow position:
Alignm length: 499
Alignm identity: 312
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 98, 112

Conread position: 955-1347
Cow position:
Alignm length: 395
Alignm identity: 233
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 103

Conread position: 955-1390
Cow position:
Alignm length: 441
Alignm identity: 268
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 168, 104

Conread position: 955-1473
Cow position:
Alignm length: 522
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 955-1523
Cow position:
Alignm length: 577
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 28

Conread position: 955-1523
Cow position:
Alignm length: 574
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 275

Conread position: 956-1521
Cow position:
Alignm length: 575
Alignm identity: 348
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 168, 89

Conread position: 962-1526
Cow position:
Alignm length: 569
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 37

Conread position: 980-1523
Cow position:
Alignm length: 548
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 257

Conread position: 982-1523
Cow position:
Alignm length: 545
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 991-1430
Cow position:
Alignm length: 444
Alignm identity: 283
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 130, 356

Conread position: 997-1525
Cow position:
Alignm length: 533
Alignm identity: 312
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 348

Conread position: 998-1521
Cow position:
Alignm length: 533
Alignm identity: 333
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 88, 17

Conread position: 998-1523
Cow position:
Alignm length: 532
Alignm identity: 329
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 54, 60

Conread position: 1019-1523
Cow position:
Alignm length: 510
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 39

Conread position: 1020-1491
Cow position:
Alignm length: 478
Alignm identity: 298
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 96, 155

Conread position: 1020-1492
Cow position:
Alignm length: 478
Alignm identity: 295
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 105, 204

Conread position: 1021-1443
Cow position:
Alignm length: 427
Alignm identity: 257
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 100, 291

Conread position: 1021-1523
Cow position:
Alignm length: 511
Alignm identity: 314
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 101, 161

Conread position: 1025-1522
Cow position:
Alignm length: 503
Alignm identity: 303
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 100, 209

Conread position: 1118-1515
Cow position:
Alignm length: 401
Alignm identity: 264
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 114, 9

Conread position: 1119-1513
Cow position:
Alignm length: 399
Alignm identity: 243
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 198, 193

Conread position: 1119-1514
Cow position:
Alignm length: 397
Alignm identity: 236
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 376, 362

Conread position: 1122-1523
Cow position:
Alignm length: 404
Alignm identity: 247
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 102, 111

Conread position: 1123-1525
Cow position:
Alignm length: 407
Alignm identity: 264
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 142, 111

Conread position: 1124-1517
Cow position:
Alignm length: 397
Alignm identity: 244
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 102, 114

Conread position: 1124-1523
Cow position:
Alignm length: 402
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 114

Conread position: 1127-1428
Cow position:
Alignm length: 303
Alignm identity: 192
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 112, 9

Conread position: 1127-1513
Cow position:
Alignm length: 389
Alignm identity: 245
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 90, 9

Conread position: 1130-1523
Cow position:
Alignm length: 397
Alignm identity: 255
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 179, 54

Conread position: 1135-1513
Cow position:
Alignm length: 381
Alignm identity: 237
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 31, 41

Conread position: 1137-1523
Cow position:
Alignm length: 388
Alignm identity: 248
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 105, 97

Conread position: 1161-1472
Cow position:
Alignm length: 317
Alignm identity: 197
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 175

Conread position: 1162-1474
Cow position:
Alignm length: 314
Alignm identity: 201
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 122, 118

Conread position: 1163-1513
Cow position:
Alignm length: 354
Alignm identity: 239
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 33

Conread position: 1169-1523
Cow position:
Alignm length: 359
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 161

Conread position: 1177-1523
Cow position:
Alignm length: 351
Alignm identity: 231
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 50

Conread position: 1182-1506
Cow position:
Alignm length: 328
Alignm identity: 202
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 42

Conread position: 1183-1506
Cow position:
Alignm length: 324
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1190-1437
Cow position:
Alignm length: 250
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 35

Conread position: 1190-1522
Cow position:
Alignm length: 333
Alignm identity: 209
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1190-1525
Cow position:
Alignm length: 336
Alignm identity: 218
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 1197-1517
Cow position:
Alignm length: 323
Alignm identity: 199
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 41

Conread position: 1198-1525
Cow position:
Alignm length: 329
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 37

Conread position: 1205-1474
Cow position:
Alignm length: 271
Alignm identity: 181
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 111, 118

Conread position: 1205-1521
Cow position:
Alignm length: 318
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 22

Conread position: 1205-1523
Cow position:
Alignm length: 321
Alignm identity: 198
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 33

Conread position: 1237-1525
Cow position:
Alignm length: 290
Alignm identity: 194
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 223, 233

Conread position: 1244-1522
Cow position:
Alignm length: 281
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 60

Conread position: 1247-1523
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 1259-1523
Cow position:
Alignm length: 265
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 1261-1524
Cow position:
Alignm length: 265
Alignm identity: 177
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 221, 214

Conread position: 1262-1523
Cow position:
Alignm length: 262
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1264-1523
Cow position:
Alignm length: 260
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1264-1523
Cow position:
Alignm length: 260
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1267-1523
Cow position:
Alignm length: 257
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1269-1517
Cow position:
Alignm length: 250
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 245, 0

Conread position: 1269-1523
Cow position:
Alignm length: 257
Alignm identity: 168
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 65

Conread position: 1289-1523
Cow position:
Alignm length: 237
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 38

Show alignments to all cow chromosomes.