Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01D040093.5 |
| Conread position: | 927-1397 |
| Cow position: | chr3:20194796-20195271 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 290 |
| Conread position: | 931-1523 |
| Cow position: | chr3:62742442-62743028 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 361 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 154, 170 |
| Conread position: | 932-1430 |
| Cow position: | chr3:68045850-68046351 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 309 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 192, 297 |
| Conread position: | 932-1432 |
| Cow position: | chr3:62722076-62721573 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 300 |
| Conread position: | 932-1439 |
| Cow position: | chr3:68027257-68027765 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 307 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 167, 298 |
| Conread position: | 932-1467 |
| Cow position: | chr3:62742858-62743375 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 323 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 155 |
| Conread position: | 932-1521 |
| Cow position: | chr3:68027089-68027681 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 309 |
| Conread position: | 932-1521 |
| Cow position: | chr3:68045682-68046274 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 225 |
| Conread position: | 932-1525 |
| Cow position: | chr3:62722244-62721650 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 372 |
| Conread position: | 934-1354 |
| Cow position: | chr3:62721990-62721567 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 271 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 190, 233 |
| Conread position: | 954-1384 |
| Cow position: | chr3:62743032-62743460 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 170, 84 |
| Conread position: | 955-1521 |
| Cow position: | chr3:62722305-62721736 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 989-1523 |
| Cow position: | chr3:68027062-68027599 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 314 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 136, 315 |
| Conread position: | 989-1526 |
| Cow position: | chr3:68045655-68046195 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 334 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 110, 116 |
| Conread position: | 1041-1474 |
| Cow position: | chr3:20194744-20195180 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 82, 200 |
| Conread position: | 1106-1523 |
| Cow position: | chr3:20194725-20195145 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 17, 135 |
| Conread position: | 1124-1399 |
| Cow position: | chr3:68027032-68027307 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 76, 71 |
| Conread position: | 1124-1523 |
| Cow position: | chr3:62722301-62721902 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 108, 114 |
| Conread position: | 1127-1525 |
| Cow position: | chr3:68027119-68027517 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 106 |
| Conread position: | 1193-1474 |
| Cow position: | chr3:68045610-68045891 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 1270-1521 |
| Cow position: | chr3:62722323-62722072 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 219, 213 |
Show alignments to all cow chromosomes.