Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01D040093.5 |
| Conread position: | 925-1523 |
| Cow position: | chr6:49428637-49429239 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 572 |
| Conread position: | 929-1523 |
| Cow position: | chr6:49428221-49428819 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 130 |
| Conread position: | 930-1454 |
| Cow position: | chr6:49340903-49341430 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 299 |
| Conread position: | 930-1514 |
| Cow position: | chr6:49396372-49396959 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 185 |
| Conread position: | 930-1521 |
| Cow position: | chr6:49340483-49341077 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 931-1475 |
| Cow position: | chr6:49362095-49362630 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 322 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 192, 234 |
| Conread position: | 932-1391 |
| Cow position: | chr6:49340989-49341450 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 372 |
| Conread position: | 932-1451 |
| Cow position: | chr6:49428981-49429503 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 448 |
| Conread position: | 932-1474 |
| Cow position: | chr6:49340569-49341114 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 932-1523 |
| Cow position: | chr6:49340821-49341415 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 151 |
| Conread position: | 932-1523 |
| Cow position: | chr6:49396290-49396884 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 126 |
| Conread position: | 932-1523 |
| Cow position: | chr6:49428897-49429491 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 157 |
| Conread position: | 938-1523 |
| Cow position: | chr6:49396046-49396632 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 358 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 949-1523 |
| Cow position: | chr6:49340418-49340995 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 550 |
| Conread position: | 949-1525 |
| Cow position: | chr6:49395893-49396466 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 281 |
| Conread position: | 956-1524 |
| Cow position: | chr6:49428837-49429408 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 352 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 92, 83 |
| Conread position: | 959-1524 |
| Cow position: | chr6:49396155-49396717 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 355 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 165, 76 |
| Conread position: | 1254-1473 |
| Cow position: | chr6:49340390-49340609 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.