Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01D040093.5 |
| Conread position: | 920-1521 |
| Cow position: | chrX:25309875-25310479 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 30 |
| Conread position: | 930-1371 |
| Cow position: | chrX:29045097-29044653 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 930-1440 |
| Cow position: | chrX:25324752-25324239 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 321 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 186, 302 |
| Conread position: | 930-1467 |
| Cow position: | chrX:25309717-25310257 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 334 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 191, 296 |
| Conread position: | 930-1521 |
| Cow position: | chrX:29045265-29044671 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 302 |
| Conread position: | 930-1523 |
| Cow position: | chrX:25309801-25310397 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 305 |
| Conread position: | 930-1523 |
| Cow position: | chrX:25325256-25324660 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 930-1525 |
| Cow position: | chrX:25325424-25324826 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 321 |
| Conread position: | 932-1368 |
| Cow position: | chrX:25310139-25310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 932-1474 |
| Cow position: | chrX:13826783-13826238 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 33 |
| Conread position: | 932-1505 |
| Cow position: | chrX:25324834-25324258 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 351 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 191, 426 |
| Conread position: | 932-1515 |
| Cow position: | chrX:29045746-29045181 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 355 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 191, 309 |
| Conread position: | 932-1521 |
| Cow position: | chrX:25325758-25325166 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 366 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 139, 196 |
| Conread position: | 932-1525 |
| Cow position: | chrX:25325002-25324406 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 935-1523 |
| Cow position: | chrX:13826948-13826357 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 353 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 116, 139 |
| Conread position: | 936-1523 |
| Cow position: | chrX:25325502-25324912 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 950-1401 |
| Cow position: | chrX:13826681-13826227 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 173, 248 |
| Conread position: | 950-1525 |
| Cow position: | chrX:13826849-13826271 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 355 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 25, 40 |
| Conread position: | 959-1446 |
| Cow position: | chrX:29045152-29044662 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 276 |
| Conread position: | 994-1464 |
| Cow position: | chrX:14181415-14180942 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 285 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 79, 70 |
| Conread position: | 997-1523 |
| Cow position: | chrX:25309700-25310229 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 238 |
| Conread position: | 1010-1514 |
| Cow position: | chrX:14181483-14180976 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 114, 137 |
| Conread position: | 1127-1525 |
| Cow position: | chrX:29045317-29044919 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 1151-1512 |
| Cow position: | chrX:14181423-14181062 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 97, 93 |
| Conread position: | 1214-1525 |
| Cow position: | chrX:25309668-25309979 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 99, 87 |
| Conread position: | 1254-1523 |
| Cow position: | chrX:29045757-29045488 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 222, 228 |
Show alignments to all cow chromosomes.