Cow genome map

Conread name: Ss1.1-LyN1-MLN01D120057.5.133

Conread position: 1-178
Cow position: chr23:5385261-5385432 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1-179
Cow position: chr23:21278682-21278856 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 0

Conread position: 1-181
Cow position: chr23:21236029-21236209 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 151
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-178
Cow position: chr23:21262982-21263154 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 146
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 30-178
Cow position: chr23:22948008-22948151 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 176-458
Cow position: chr23:5390957-5391241 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 27, 13

Conread position: 176-463
Cow position: chr23:21283947-21284237 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 124, 0

Conread position: 179-457
Cow position: chr23:22932422-22932700 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 239, 251

Conread position: 208-417
Cow position: chr23:5464267-5464058 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 208-457
Cow position: chr23:21242372-21242621 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 210-457
Cow position: chr23:5448991-5448744 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 450-734
Cow position: chr23:5398918-5399202 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 454-732
Cow position: chr23:5446513-5446235 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 454-734
Cow position: chr23:21267650-21267923 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 454-734
Cow position: chr23:22907855-22908132 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 454-750
Cow position: chr23:21244789-21245086 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 0

Conread position: 454-750
Cow position: chr23:22934740-22935037 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 0

Conread position: 454-750
Cow position: chr23:22957047-22957344 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 0

Conread position: 462-734
Cow position: chr23:5463568-5463296 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 734-845
Cow position: chr23:21245812-21245923 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 103
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 734-845
Cow position: chr23:21268654-21268765 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 734-845
Cow position: chr23:22908834-22908945 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 734-845
Cow position: chr23:22958043-22958154 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 736-845
Cow position: chr23:22936840-22936949 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 840-1224
Cow position: chr23:22937697-22938058 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 277
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 107, 67

Conread position: 866-1220
Cow position: chr23:21246706-21247056 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 37

Conread position: 866-1224
Cow position: chr23:21269560-21269890 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 167, 37

Show alignments to all cow chromosomes.